SNP Profiles of PBC 123 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CC	AC	CC	AA	AG	AA	CT	GG	AA	CC	AC	TT	TT	TT
1._PBC_123___	CC	AC	CC	AA	AG	AA	CT	GG	AA	CC	AC	TT	TT	TT
2._PBC_123___	__	__	__	__	AG	__	__	__	__	__	AC	__	__	__
3._PBC_123___	__	__	__	__	AG	__	__	__	__	__	AC	__	__	__

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CC	CT	CC	TT	AT	TT	CC	GG	GG	TT	TT	AC	TT	CT
1._PBC_123___	CC	CT	CC	TT	AT	TT	CC	GG	GG	TT	TT	AC	TT	CT
2._PBC_123___	__	__	__	__	__	__	GG	__	__	__	AA	__	__	__
3._PBC_123___	__	__	__	__	__	__	GG	__	__	__	AA	__	__	__

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	TT	AA	CT	AT	TT	CC	AA	CC	AG	GG	TT	AT	CC	CT
1._PBC_123___	TT	AA	CT	AT	TT	CC	AA	CC	AG	GG	TT	AT	CC	CT
2._PBC_123___	__	AA	__	__	__	__	AA	__	AG	CC	CC	__	CC	__
3._PBC_123___	__	AA	__	__	__	__	AA	__	AG	CC	CC	__	CC	__

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	TT	GG	GT	CT	CC	GG	CC	AG	CC	CT	AC	AA	CG	AA
1._PBC_123___	TT	GG	GT	CT	CC	GG	CC	AG	CC	CT	AC	AA	CG	AA
2._PBC_123___	__	GG	AC	__	__	__	__	__	__	AG	AC	__	CG	__
3._PBC_123___	__	GG	AC	__	__	__	__	__	__	AG	AC	__	CG	__

	57
_Input profile	AC	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._PBC_123___	AC	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._PBC_123___	CC	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._PBC_123___	CC	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: PBC_123 RUQ_1499B

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

1._PBC_123 RUQ_1499

identical
57 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

Ame
0.288 Cri
0.234 Nan
0.375

2._PBC_123 RUQ_1499

59.4 %
16 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

3._PBC_123 CN03/PBC123(S1)/PCT10

59.4 %
16 shared markers

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Mars Research Cocoa Centre, Indonesia

Location: Tree: CN03/PBC123(S1)/PCT10

Notes: MRCC_Parents

Key to SNP Markers

Key to SNP Markers

1	TcSNP522	2	TcSNP519	3	TcSNP421	4	TcSNP363	5	TcSNP329
6	TcSNP305	7	TcSNP290	8	TcSNP194	9	TcSNP189	10	TcSNP176
11	TcSNP144	12	TcSNP143	13	TcSNP131	14	TcSNP52	15	TcSNP49
16	TcSNP33	17	TcSNP19	18	TcSNP13	19	TcSNP1527	20	TcSNP1524
21	TcSNP1458	22	TcSNP1404	23	TcSNP1401	24	TcSNP1293	25	TcSNP1253
26	TcSNP1230	27	TcSNP1205	28	TcSNP1144	29	TcSNP1112	30	TcSNP1062
31	TcSNP1053	32	TcSNP1019	33	TcSNP1010	34	TcSNP999	35	TcSNP998
36	TcSNP945	37	TcSNP899	38	TcSNP872	39	TcSNP836	40	TcSNP835
41	TcSNP823	42	TcSNP800	43	TcSNP739	44	TcSNP731	45	TcSNP723
46	TcSNP702	47	TcSNP660	48	TcSNP645	49	TcSNP644	50	TcSNP642
51	TcSNP640	52	TcSNP602	53	TcSNP591	54	TcSNP589	55	TcSNP577
56	TcSNP546	57	TcSNP529