SNP Profiles of UF 273 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CT	AA	CT	CC	GG	GT	AA	CC	TT	AA	GT	AA	CC	AA
1._RUQ_1707B	CT	AA	CT	CC	GG	GT	AA	CC	TT	AA	GT	AA	CC	AA
2._UF_273	__	__	__	__	__	__	__	CC	__	__	__	AA	__	__
3._UF_273	__	__	__	__	__	__	__	CC	__	__	__	AA	__	__
4._RUQ_1707	__	__	__	__	__	__	__	CC	__	__	__	AA	__	__
5._MITC-000717	__	__	__	__	__	__	__	CC	__	__	__	AA	__	__

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	AC	CC	AC	CC	AA	AA	CG	AA	CC	CC	TT	AA	CC
1._RUQ_1707B	GG	AC	CC	AC	CC	AA	AA	CG	AA	CC	CC	TT	AA	CC
2._UF_273	GG	__	__	__	__	AC	__	CG	__	CC	GG	__	__	__
3._UF_273	GG	__	__	__	__	AC	__	CG	__	CC	GG	__	__	__
4._RUQ_1707	GG	__	__	__	__	AC	__	CG	__	CC	GG	__	__	__
5._MITC-000717	GG	__	__	__	__	CC	__	CC	__	AA	AA	__	__	__

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	AA	CC	GG	AG	CC	TT	CC	AA	CC	GG	AG	CC	AA	CT
1._RUQ_1707B	AA	CC	GG	AG	CC	TT	CC	AA	CC	GG	AG	CC	AA	CT
2._UF_273	__	__	CC	AG	__	__	CC	__	GG	CC	AG	__	AA	__
3._UF_273	__	__	CC	AG	__	__	CC	__	GG	CC	AG	__	AA	__
4._RUQ_1707	__	__	CC	AG	__	__	CC	__	GG	CC	AG	__	AA	__
5._MITC-000717	__	__	CC	GG	__	__	AA	__	CC	CC	AA	__	GG	__

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CT	AA	CT	GG	TT	CT	GG	AA	CT	GG	GG	TT	AG	GG
1._RUQ_1707B	CT	AA	CT	GG	TT	CT	GG	AA	CT	GG	GG	TT	AG	GG
2._UF_273	__	__	__	GG	__	__	__	__	__	CC	__	__	__	__
3._UF_273	__	__	__	GG	__	__	__	__	__	CC	__	__	__	__
4._RUQ_1707	__	__	__	GG	__	__	__	__	__	CC	__	__	__	__
5._MITC-000717	__	__	__	AA	__	__	__	__	__	AA	__	__	__	__

	57	58	59
_Input profile	CC	TT	AT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._RUQ_1707B	CC	TT	AT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._UF_273	GG	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._UF_273	GG	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._RUQ_1707	GG	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._MITC-000717	CC	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: UF_273 RUQ_1707

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

View Data

Nac
0.826

1._UF_273 RUQ_1707B

identical
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

2._UF_273

61.8 %
17 shared markers

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Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica

Location: Tree: Tree-2

Mars, 2018

3._UF_273

61.8 %
17 shared markers

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Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica

Location: Field: La Montana, Tree: 1

Mars, 2018

4._UF_273 RUQ_1707

61.8 %
17 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Mars, 2018

5._UF_273 MITC-000717

38.2 %
17 shared markers

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USDA-SHRS, United States of America

Mars, 2018

Key to SNP Markers

1	TcSNP13	2	TcSNP19	3	TcSNP33	4	TcSNP49	5	TcSNP52
6	TcSNP131	7	TcSNP143	8	TcSNP144	9	TcSNP176	10	TcSNP189
11	TcSNP194	12	TcSNP230	13	TcSNP290	14	TcSNP305	15	TcSNP329
16	TcSNP363	17	TcSNP421	18	TcSNP519	19	TcSNP522	20	TcSNP529
21	TcSNP546	22	TcSNP577	23	TcSNP589	24	TcSNP591	25	TcSNP602
26	TcSNP640	27	TcSNP642	28	TcSNP644	29	TcSNP645	30	TcSNP660
31	TcSNP723	32	TcSNP731	33	TcSNP739	34	TcSNP800	35	TcSNP823
36	TcSNP835	37	TcSNP836	38	TcSNP872	39	TcSNP899	40	TcSNP945
41	TcSNP998	42	TcSNP999	43	TcSNP1010	44	TcSNP1019	45	TcSNP1053
46	TcSNP1062	47	TcSNP1112	48	TcSNP1144	49	TcSNP1205	50	TcSNP1230
51	TcSNP1237	52	TcSNP1253	53	TcSNP1275	54	TcSNP1293	55	TcSNP1401
56	TcSNP1404	57	TcSNP1458	58	TcSNP1524	59	TcSNP1527

SNP Profiles of UF 273 View Data

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Input profile: UF_273 RUQ_1707

1._UF_273 RUQ_1707B

identical 59 shared markers

2._UF_273

61.8 % 17 shared markers

3._UF_273

61.8 % 17 shared markers

4._UF_273 RUQ_1707

61.8 % 17 shared markers

5._UF_273 MITC-000717

38.2 % 17 shared markers

identical
59 shared markers

61.8 %
17 shared markers

61.8 %
17 shared markers

61.8 %
17 shared markers

38.2 %
17 shared markers