SNP Profiles of SHRS-4 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	AC	CT	AC	GG	TT	AA	AA	CT	AG	GT	AA	TT	CC
1._RUQ_1709B	TT	AC	CT	AC	GG	TT	AA	AA	CT	AG	GT	AA	TT	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AG	AC	CT	AC	CC	AC	AG	CG	AT	AC	CC	TT	AG	CG
1._RUQ_1709B	AG	AC	CT	AC	CC	__	AG	CG	AT	AC	CC	TT	AG	CG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	GG	CC	CT	GG	AG	CC	TT	CC	AT	TT	CC	GG	GG	AA
1._RUQ_1709B	GG	CC	CT	GG	AG	CC	TT	CC	AT	TT	CC	GG	GG	AA

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CC	CC	AT	CT	GG	TT	CC	GT	AA	CC	GT	GT	AT	AA
1._RUQ_1709B	CC	CC	AT	__	GG	TT	CC	GT	AA	__	GT	GT	__	AA

	57	58	59	60
_Input profile	AG	GG	CT	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._RUQ_1709B	AG	GG	CT	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: SHRS-4 RUQ_1709

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

Ame
0.221 Cri
0.236 IMC
0.287 Sca
0.246

1._SHRS-4 RUQ_1709B

identical
56 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Key to SNP Markers

Key to SNP Markers

1	TcSNP13	2	TcSNP19	3	TcSNP33	4	TcSNP49	5	TcSNP52
6	TcSNP131	7	TcSNP143	8	TcSNP144	9	TcSNP176	10	TcSNP189
11	TcSNP194	12	TcSNP230	13	TcSNP290	14	TcSNP305	15	TcSNP329
16	TcSNP363	17	TcSNP421	18	TcSNP519	19	TcSNP522	20	TcSNP529
21	TcSNP546	22	TcSNP577	23	TcSNP589	24	TcSNP591	25	TcSNP602
26	TcSNP640	27	TcSNP642	28	TcSNP644	29	TcSNP645	30	TcSNP660
31	TcSNP702	32	TcSNP723	33	TcSNP731	34	TcSNP739	35	TcSNP800
36	TcSNP823	37	TcSNP835	38	TcSNP836	39	TcSNP872	40	TcSNP899
41	TcSNP945	42	TcSNP998	43	TcSNP999	44	TcSNP1010	45	TcSNP1019
46	TcSNP1053	47	TcSNP1062	48	TcSNP1112	49	TcSNP1144	50	TcSNP1205
51	TcSNP1230	52	TcSNP1237	53	TcSNP1253	54	TcSNP1275	55	TcSNP1293
56	TcSNP1401	57	TcSNP1404	58	TcSNP1458	59	TcSNP1524	60	TcSNP1527