| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | CT | CC | CT | AC | GG | GT | AT | AC | CT | AG | GT | AA | TT | CC |
1._RUQ_1737 | CT | CC | CT | AC | GG | GT | AT | AC | CT | AG | GT | AA | TT | CC |
2._RUQ_1737C | CT | CC | CT | AC | GG | GT | AT | AC | CT | AG | GT | AA | TT | CC |
3._RUQ_1737B | CT | CC | CT | AC | GG | GT | AT | AC | CT | AG | GT | AA | TT | CC |
4._CCN_51 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
5._CCN_51 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
6._CCN_51 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
7._CCN_51 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
8._CCN_51 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
9._CCN_51 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
10._CCN_51 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
11._CCN_51 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
12._CCN_51 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
13._CCN_51 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
14._GC-07-019-1-21 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
15._GC-07-019-1-21 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
16._GC-07-019-1-21 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
17._GC-07-019-1-21 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
18._GC-06-4-1-04 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
19._GC-07-019-1-21 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
20._GC-07-019-1-21 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
21._GC-07-019-1-21 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
22._GC-07-19-1-21 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
23._RUQ_1736 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
24._MITC-000000 | __ | __ | __ | __ | __ | __ | __ | AC | __ | __ | __ | AA | __ | __ |
25._CCN_51 | __ | __ | __ | __ | __ | __ | __ | AA | __ | __ | __ | GG | __ | __ |
| 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | AG | CC | CT | AA | CC | AA | AA | CC | AA | CC | CC | TT | AA | CG |
1._RUQ_1737 | AG | CC | CT | AA | CC | AA | AA | CC | AA | CC | CC | TT | AA | CG |
2._RUQ_1737C | AG | CC | CT | AA | CC | AA | AA | CC | AA | CC | CC | TT | AA | CG |
3._RUQ_1737B | AG | CC | CT | AA | CC | __ | AA | CC | AA | CC | CC | TT | AA | CG |
4._CCN_51 | __ | __ | __ | __ | __ | AC | __ | CC | __ | CC | __ | __ | __ | __ |
5._CCN_51 | __ | __ | __ | __ | __ | AC | __ | CC | __ | CC | __ | __ | __ | __ |
6._CCN_51 | __ | __ | __ | __ | __ | AC | __ | CC | __ | CC | __ | __ | __ | __ |
7._CCN_51 | __ | __ | __ | __ | __ | AC | __ | CC | __ | CC | __ | __ | __ | __ |
8._CCN_51 | __ | __ | __ | __ | __ | AC | __ | CC | __ | CC | __ | __ | __ | __ |
9._CCN_51 | __ | __ | __ | __ | __ | AC | __ | CC | __ | CC | __ | __ | __ | __ |
10._CCN_51 | __ | __ | __ | __ | __ | AC | __ | CC | __ | CC | __ | __ | __ | __ |
11._CCN_51 | __ | __ | __ | __ | __ | AC | __ | CC | __ | CC | __ | __ | __ | __ |
12._CCN_51 | __ | __ | __ | __ | __ | AC | __ | CC | __ | CC | __ | __ | __ | __ |
13._CCN_51 | __ | __ | __ | __ | __ | AC | __ | CC | __ | __ | __ | __ | __ | __ |
14._GC-07-019-1-21 | AG | __ | __ | __ | __ | AC | __ | CC | __ | __ | CC | __ | __ | __ |
15._GC-07-019-1-21 | AG | __ | __ | __ | __ | AC | __ | CC | __ | CC | CC | __ | __ | __ |
16._GC-07-019-1-21 | AG | __ | __ | __ | __ | AC | __ | CC | __ | CC | CC | __ | __ | __ |
17._GC-07-019-1-21 | AG | __ | __ | __ | __ | AC | __ | CC | __ | CC | CC | __ | __ | __ |
18._GC-06-4-1-04 | AG | __ | __ | __ | __ | AC | __ | CC | __ | CC | CC | __ | __ | __ |
19._GC-07-019-1-21 | AG | __ | __ | __ | __ | AC | __ | CC | __ | CC | CC | __ | __ | __ |
20._GC-07-019-1-21 | AG | __ | __ | __ | __ | AC | __ | CC | __ | CC | CC | __ | __ | __ |
21._GC-07-019-1-21 | AG | __ | __ | __ | __ | AC | __ | CC | __ | CC | CC | __ | __ | __ |
22._GC-07-19-1-21 | AG | __ | __ | __ | __ | AC | __ | CC | __ | CC | GG | __ | __ | __ |
23._RUQ_1736 | AG | __ | __ | __ | __ | AC | __ | CC | __ | CC | GG | __ | __ | __ |
24._MITC-000000 | AG | __ | __ | __ | __ | AC | __ | CC | __ | CC | GG | __ | __ | __ |
25._CCN_51 | __ | __ | __ | __ | __ | CC | __ | CC | __ | CC | __ | __ | __ | __ |
| 29 | 30 | 31 | 32 | 33 | 34 | 35 | 36 | 37 | 38 | 39 | 40 | 41 | 42 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | AG | CC | TT | GG | GG | CT | CT | CC | AA | TT | CC | AG | GG | AA |
1._RUQ_1737 | AG | CC | TT | GG | GG | CT | CT | CC | AA | TT | CC | AG | GG | AA |
2._RUQ_1737C | AG | CC | TT | GG | GG | CT | CT | CC | AA | TT | CC | AG | GG | AA |
3._RUQ_1737B | AG | CC | TT | GG | GG | CT | CT | CC | AA | TT | CC | AG | GG | AA |
4._CCN_51 | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | CC | __ | __ | AA |
5._CCN_51 | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | CC | __ | __ | AA |
6._CCN_51 | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | CC | __ | __ | AA |
7._CCN_51 | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | CC | __ | __ | AA |
8._CCN_51 | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | CC | __ | __ | AA |
9._CCN_51 | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | CC | __ | __ | AA |
10._CCN_51 | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | CC | __ | __ | AA |
11._CCN_51 | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | CC | __ | __ | AA |
12._CCN_51 | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | CC | __ | __ | AA |
13._CCN_51 | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | __ | __ | __ | AA |
14._GC-07-019-1-21 | AG | __ | __ | GG | GG | __ | __ | CC | __ | CG | __ | AG | __ | AA |
15._GC-07-019-1-21 | AG | __ | CC | GG | GG | __ | __ | CC | __ | CG | CC | AG | __ | AA |
16._GC-07-019-1-21 | AG | __ | CC | GG | GG | __ | __ | CC | __ | CG | CC | AG | __ | AA |
17._GC-07-019-1-21 | AG | __ | CC | GG | GG | __ | __ | CC | __ | CG | CC | AG | __ | AA |
18._GC-06-4-1-04 | AG | __ | CC | GG | GG | __ | __ | CC | __ | CG | CC | AG | __ | AA |
19._GC-07-019-1-21 | AG | __ | CC | GG | GG | __ | __ | CC | __ | CG | CC | AG | __ | AA |
20._GC-07-019-1-21 | AG | __ | CC | GG | GG | __ | __ | CC | __ | CG | CC | AG | __ | AA |
21._GC-07-019-1-21 | AG | __ | CC | GG | GG | __ | __ | CC | __ | CG | CC | AG | __ | AA |
22._GC-07-19-1-21 | __ | __ | __ | CC | GG | __ | __ | CC | __ | CG | GG | AG | __ | AA |
23._RUQ_1736 | __ | __ | __ | CC | GG | __ | __ | CC | __ | CG | GG | AG | __ | AA |
24._MITC-000000 | __ | __ | __ | CC | GG | __ | __ | CC | __ | CG | GG | AG | __ | AA |
25._CCN_51 | GG | __ | __ | TT | __ | __ | __ | __ | __ | __ | CC | __ | __ | AA |
| 43 | 44 | 45 | 46 | 47 | 48 | 49 | 50 | 51 | 52 | 53 | 54 | 55 | 56 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | CC | CC | AT | CT | AG | CT | CT | GT | AA | CT | TT | GT | AT | AG |
1._RUQ_1737 | CC | CC | AT | CT | AG | CT | CT | GT | AA | CT | TT | GT | AT | AG |
2._RUQ_1737C | CC | CC | AT | CT | AG | CT | CT | GT | AA | CT | TT | GT | AT | AG |
3._RUQ_1737B | CC | CC | AT | __ | AG | CT | CT | GT | AA | __ | TT | GT | __ | AG |
4._CCN_51 | __ | __ | __ | __ | AG | __ | CT | __ | __ | __ | TT | __ | __ | __ |
5._CCN_51 | __ | __ | __ | __ | AG | __ | CT | __ | __ | __ | TT | __ | __ | __ |
6._CCN_51 | __ | __ | __ | __ | AG | __ | CT | __ | __ | __ | TT | __ | __ | __ |
7._CCN_51 | __ | __ | __ | __ | AG | __ | CT | __ | __ | __ | TT | __ | __ | __ |
8._CCN_51 | __ | __ | __ | __ | AG | __ | CT | __ | __ | __ | TT | __ | __ | __ |
9._CCN_51 | __ | __ | __ | __ | AG | __ | CT | __ | __ | __ | TT | __ | __ | __ |
10._CCN_51 | __ | __ | __ | __ | AG | __ | CT | __ | __ | __ | TT | __ | __ | __ |
11._CCN_51 | __ | __ | __ | __ | AG | __ | CT | __ | __ | __ | TT | __ | __ | __ |
12._CCN_51 | __ | __ | __ | __ | AG | __ | CT | __ | __ | __ | TT | __ | __ | __ |
13._CCN_51 | __ | __ | __ | __ | __ | __ | CT | __ | __ | __ | TT | __ | __ | __ |
14._GC-07-019-1-21 | CC | __ | __ | __ | __ | __ | CT | __ | __ | __ | TT | __ | __ | __ |
15._GC-07-019-1-21 | CC | __ | __ | __ | AG | __ | CT | __ | __ | __ | TT | __ | __ | __ |
16._GC-07-019-1-21 | CC | __ | __ | __ | AG | __ | CT | __ | __ | __ | TT | __ | __ | __ |
17._GC-07-019-1-21 | CC | __ | __ | __ | AG | __ | CT | __ | __ | __ | TT | __ | __ | __ |
18._GC-06-4-1-04 | CC | __ | __ | __ | AG | __ | CT | __ | __ | __ | TT | __ | __ | __ |
19._GC-07-019-1-21 | CC | __ | __ | __ | AG | __ | CT | __ | __ | __ | TT | __ | __ | __ |
20._GC-07-019-1-21 | CC | __ | __ | __ | AG | __ | CT | __ | __ | __ | TT | __ | __ | __ |
21._GC-07-019-1-21 | CC | __ | __ | __ | AG | __ | CT | __ | __ | __ | TT | __ | __ | __ |
22._GC-07-19-1-21 | __ | __ | __ | __ | AG | __ | __ | __ | __ | __ | AA | __ | __ | __ |
23._RUQ_1736 | __ | __ | __ | __ | AG | __ | __ | __ | __ | __ | AA | __ | __ | __ |
24._MITC-000000 | __ | __ | __ | __ | AG | __ | __ | __ | __ | __ | AA | __ | __ | __ |
25._CCN_51 | __ | __ | __ | __ | AA | __ | CC | __ | __ | __ | GG | __ | __ | __ |
| 57 | 58 | 59 | 60 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | GG | GG | TT | AT | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
1._RUQ_1737 | GG | GG | TT | AT | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
2._RUQ_1737C | GG | GG | TT | AT | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
3._RUQ_1737B | GG | GG | TT | AT | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
4._CCN_51 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
5._CCN_51 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
6._CCN_51 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
7._CCN_51 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
8._CCN_51 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
9._CCN_51 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
10._CCN_51 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
11._CCN_51 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
12._CCN_51 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
13._CCN_51 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
14._GC-07-019-1-21 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
15._GC-07-019-1-21 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
16._GC-07-019-1-21 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
17._GC-07-019-1-21 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
18._GC-06-4-1-04 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
19._GC-07-019-1-21 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
20._GC-07-019-1-21 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
21._GC-07-019-1-21 | __ | GG | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
22._GC-07-19-1-21 | __ | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
23._RUQ_1736 | __ | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
24._MITC-000000 | __ | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
25._CCN_51 | __ | CC | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
| 1 | TcSNP13 | 2 | TcSNP19 | 3 | TcSNP33 | 4 | TcSNP49 | 5 | TcSNP52 |
| 6 | TcSNP131 | 7 | TcSNP143 | 8 | TcSNP144 | 9 | TcSNP176 | 10 | TcSNP189 |
| 11 | TcSNP194 | 12 | TcSNP230 | 13 | TcSNP290 | 14 | TcSNP305 | 15 | TcSNP329 |
| 16 | TcSNP363 | 17 | TcSNP421 | 18 | TcSNP519 | 19 | TcSNP522 | 20 | TcSNP529 |
| 21 | TcSNP546 | 22 | TcSNP577 | 23 | TcSNP589 | 24 | TcSNP591 | 25 | TcSNP602 |
| 26 | TcSNP640 | 27 | TcSNP642 | 28 | TcSNP644 | 29 | TcSNP645 | 30 | TcSNP660 |
| 31 | TcSNP702 | 32 | TcSNP723 | 33 | TcSNP731 | 34 | TcSNP739 | 35 | TcSNP800 |
| 36 | TcSNP823 | 37 | TcSNP835 | 38 | TcSNP836 | 39 | TcSNP872 | 40 | TcSNP899 |
| 41 | TcSNP945 | 42 | TcSNP998 | 43 | TcSNP999 | 44 | TcSNP1010 | 45 | TcSNP1019 |
| 46 | TcSNP1053 | 47 | TcSNP1062 | 48 | TcSNP1112 | 49 | TcSNP1144 | 50 | TcSNP1205 |
| 51 | TcSNP1230 | 52 | TcSNP1237 | 53 | TcSNP1253 | 54 | TcSNP1275 | 55 | TcSNP1293 |
| 56 | TcSNP1401 | 57 | TcSNP1404 | 58 | TcSNP1458 | 59 | TcSNP1524 | 60 | TcSNP1527 |