SNP Profiles of SC 1 [UNK] View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CT	AC	CC	GT	CC	GG	AA	CC	GG	CC	GG	AG	AT	CG
1._NA_399___	__	__	CC	__	__	__	__	__	GG	__	GG	__	__	__
2._NA_399___	__	__	CC	__	CC	GG	AA	CG	AG	__	__	GG	AA	CC
3._NA_399___	AG	AC	CC	AC	GG	GG	AA	GG	GG	GG	GG	AG	AT	CG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	CT	TT	CC	AA	CC	CT	TT	GG	GG	TT	CC	CC
1._NA_399___	__	CC	__	__	CC	AC	CC	__	TT	GG	GG	__	CC	CC
2._NA_399___	__	__	__	__	GG	AC	CC	__	__	__	__	__	__	CG
3._NA_399___	__	CC	__	AA	CC	AC	GG	AG	__	CC	GG	AA	CC	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41
_Input profile	CC	CC	AA	CC	TT	AG	AA	TT	TT	TT	TT	CG	AA	X_X
1._NA_399___	__	__	AA	__	__	__	__	TT	__	__	__	CG	__	X_X
2._NA_399___	GG	CC	__	CC	__	GG	TT	__	__	CC	__	GG	__	X_X
3._NA_399___	__	GG	AA	GG	AA	AG	__	AA	AA	AA	AA	CC	AA	X_X

Input profile: NA_399 RUQ_1572

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._NA_399 RUQ_1572

96.7 %
15 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

Ame
0.696 Cri
0.299

2._NA_399 RUQ_1572

57.5 %
20 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Location: GBR207

Jocelyn De Wever et al., 2019

3._NA_399 RUQ_1572

47.2 %
36 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP891
31	TcSNP998	32	TcSNP1060	33	TcSNP1063	34	TcSNP1111	35	TcSNP1126
36	TcSNP1253	37	TcSNP1309	38	TcSNP1439	39	TcSNP1442	40	TcSNP1458
41	TcSNP1484