SNP Profiles of POUND 10 /B   View Data

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 1234567891011121314
_Input profile
TTCCAAGGCCGGAACCGGCCGGGGAACC
1._POUND_10_/B
__AAGGCC_AACCGGCC__AA_
2._POUND_10_/B
__AAGGCC_AACCGGCC__AA_
3._POUND_10_/B
__AAGGCC_AACCGGCC__AA_
4._POUND_10_/B
__AAGGCC_AACCGGCC__AA_
5._POUND_10_/B
__AAGGCC_AACCGGCC__AA_
6._POUND_10_/B
__AAGGCC_AACCGGCC__AA_
7._POUND_10_/B
__AAGGCC_AACCGGCC__AA_
8._POUND_10_/B
__AAGGCC_AACCGGCC__AA_
9._RUQ_1618
__AAGGCC_AACCGGCC__AA_
10._GC-01-115-6-12
TTCCAAGGCCGGAACCGGCCGGGGAACC
11._GC-01-115-6-12
TTCCAAGGCCGGAACCGGCCGGGGAACC
12._GC-01-115-6-12
TTCCAAGGCCGGAACCGGCCGGGGAACC
13._GC-01-115-6-12
TTCCAAGGCCGGAACCGGCCGGGGAACC
14._GC-08-162-4-05
TTCCAAGGCCGGAACCGGCCGGGGAACC
15._GC-08-163-4-06
TTCCAAGGCCGGAACCGGCCGGGGAACC
16._GC-08-163-4-06
TTCCAAGGCCGGAACCGGCCGGGGAACC
17._GC-08-163-4-06
TTCCCCGTCTGGACCCAACCAGGGAACG
18._GC-08-162-4-05
CTCCACGTCTAGCCCCAGCTAGGGAACG
19._GC-01-115-6-12
CTCCACGTCTAGCCCCAGCTAGGGAACG
20._GC-01-115-6-12
CTCCACGTCTAGCCCCAGCTAGGGAACG
21._GC-08-162-4-05
CTCCACGTCTAGCCCCAGCTAGGGAACG
22._GC-08-162-4-05
CTCCACGTCTAGCCCCAGCTAGGGAACG
23._GC-08-162-4-05
CTCCACGTCTAGCCCCAGCTAGGGAACG
24._GC-08-162-4-05
CTCCACGTCTAGCCCCAGCTAGGGAACG
25._GC-08-162-4-05
CTCCACGTCTAGCCCCAGCTAGGGAACG
26._POUND_10_/B
__CCGTCT_ACCCAACC__AA_
27._GC-08-162-4-05
CTCCACGTCTAGCCCCAGCTAGGG_CG
28._POUND_10_/B
__ACGTCT_CCCCAGCT__AA_
29._POUND_10_/B
__ACGTCT_CCCCAGCT__AA_
30._POUND_10_/B
__ACGTCT_CCCCAGCT__AA_
31._POUND_10_/B
__ACGTCT_CCCCAGCT__AA_
32._POUND_10_/B
__ACGTCT_CCCCAGCT__AA_
33._POUND_10_/B
__ACGTCT_CCCCAGCT__AA_
34._POUND_10_/B
__ACGTCT_CCCCAGCT__AA_
35._POUND_10_/B
__ACGTCT_CCCCAGCT__AA_
36._POUND_10_/B
__ACGTCT_CCCCAGCT____
 1516171819202122232425262728
_Input profile
AACCCCTTGGAACCCCTTGGGGTTCCCG
1._POUND_10_/B
AACCCCTTGGAA_CC_GG___CG
2._POUND_10_/B
AACCCCTTGGAA_CC_GG___CG
3._POUND_10_/B
AACCCCTTGGAA_CC_GG___CG
4._POUND_10_/B
AACCCCTTGGAA_CC_GG___CG
5._POUND_10_/B
AACCCCTTGGAA_CC_GG___CG
6._POUND_10_/B
AACCCCTTGGAA_CC_GG___CG
7._POUND_10_/B
AACCCCTTGGAA_CC_GG___CG
8._POUND_10_/B
AACCCCTTGGAA_CC_GG___CG
9._RUQ_1618
AACCCCTTGGAA_CC_GG___CG
10._GC-01-115-6-12
AACCCCTTGGAACCCCCCGGGGTTCCCG
11._GC-01-115-6-12
AACCCCTTGGAACCCCCCGGGGTTCCCG
12._GC-01-115-6-12
AACCCCTTGGAACCCCCCGGGGTTCCCG
13._GC-01-115-6-12
AACCCCTTGGAACCCCCCGGGGTTCCCG
14._GC-08-162-4-05
AACCCCTTGGAACCCCCCGGGGTTCCCG
15._GC-08-163-4-06
AACCCCTTGGAACCCCCCGGGGTTCCCG
16._GC-08-163-4-06
AACCCCTTGGAACCCCCCGGGG_CCCG
17._GC-08-163-4-06
AACCCTGTCGAATTTTCCGGAGTTACCG
18._GC-08-162-4-05
AGACCTGGGGACCCCTCTGGAGTTACCG
19._GC-01-115-6-12
AGACCTGGGGACCCCTCTGGAGTTACCG
20._GC-01-115-6-12
AGACCTGGGGACCCCTCTGGAGTTACCG
21._GC-08-162-4-05
AGACCTGGGGACCCCTCTGGAGTTACCG
22._GC-08-162-4-05
AGACCTGGGGACCCCTCTGGAGTTACCG
23._GC-08-162-4-05
AGACCTGGGGACCCCTCTGGAGTTACCG
24._GC-08-162-4-05
AGACCTGGGGACCCCTCTGGAGTTACCG
25._GC-08-162-4-05
AGACCTGGGGACCCCTCTGGAGTTACCG
26._POUND_10_/B
AACCCTGTCGAA_TT_GG___CG
27._GC-08-162-4-05
AGACCTGGGGACCCCTCTGGAGTTACCG
28._POUND_10_/B
AGACCTGGGGAC_CT_GG___CG
29._POUND_10_/B
AGACCTGGGGAC_CT_GG___CG
30._POUND_10_/B
AGACCTGGGGAC_CT_GG___CG
31._POUND_10_/B
AGACCTGGGGAC_CT_GG___CG
32._POUND_10_/B
AGACCTGGGGAC_CT_GG___CG
33._POUND_10_/B
AGACCTGGGGAC_CT_GG___CG
34._POUND_10_/B
AGACCTGGGGAC_CT_GG___CG
35._POUND_10_/B
AGACCTGGGGAC_CT_GG___CG
36._POUND_10_/B
AGACCTGGGGAC_CT_GG___CG
 2930313233343536373839404142
_Input profile
CCTTGGCCCCGGGGTTTTTTCCTTGGAA
1._POUND_10_/B
_TTGG_CC___TT__TTGGAA
2._POUND_10_/B
_TTGG_CC___TT__TTGGAA
3._POUND_10_/B
_TTGG_CC___TT__TTGGAA
4._POUND_10_/B
_TTGG_CC___TT__TTGGAA
5._POUND_10_/B
_TTGG_CC___TT__TTGGAA
6._POUND_10_/B
_TTGG_CC___TT__TTGGAA
7._POUND_10_/B
_TTGG_CC___TT__TTGGAA
8._POUND_10_/B
_TTGG_CC___TT__TTGGAA
9._RUQ_1618
_TTGG_CC___TT__TTGGAG
10._GC-01-115-6-12
CCTTGGCCCCGGGGTTTTTTCCTTGGAA
11._GC-01-115-6-12
CCTTGGCCCCGGGGTTTTTTCCTTGGAA
12._GC-01-115-6-12
CCTTGGCCCCGGGGTTTTTTCCTTGGAA
13._GC-01-115-6-12
CCTTGGCCCCGGGGTTTTTTCCTTGGAA
14._GC-08-162-4-05
CCTTGGCCCCGGGGTTTTTTCCTTGGAA
15._GC-08-163-4-06
CCTTGG_CCGGGGTTTTTTCCTTGGAA
16._GC-08-163-4-06
CCTTGGCCCCGGGGTTTTTTCCTTGGAA
17._GC-08-163-4-06
CCCCAGCTCCGGAGTTTTTTCTCTGGAG
18._GC-08-162-4-05
CGCTAACCCCGGGGTTGT_CCTTCCAG
19._GC-01-115-6-12
CGCTAACCCCGGGGTTGT_CCTTCCAG
20._GC-01-115-6-12
CGCTAACCCCGGGGTTGT_CCTTCCAG
21._GC-08-162-4-05
CGCTAACCCCGGGGTTGT_CCTTCCAG
22._GC-08-162-4-05
CGCTAACCCCGGGGTTGT_CCTTCCAG
23._GC-08-162-4-05
CGCTAACCCCGGGGTTGT_CCTTCCAG
24._GC-08-162-4-05
CGCTAACCCCGGGGTTGT_CCTTCCAG
25._GC-08-162-4-05
CGCTAACCCCGGGGTTGT_CCTTCCAG
26._POUND_10_/B
_CCAG_CC___TT__CTGGAG
27._GC-08-162-4-05
CGCTAACCCCGGGGTTGT_CCTTCCAG
28._POUND_10_/B
_CTAA_CC___GT__TTCCAG
29._POUND_10_/B
_CTAA_CC___GT__TTCCAG
30._POUND_10_/B
_CTAA_CC___GT__TTCCAG
31._POUND_10_/B
_CTAA_CC___GT__TTCCAG
32._POUND_10_/B
_CTAA_CC___GT__TTCCAG
33._POUND_10_/B
_CTAA_CC___GT__TTCCAG
34._POUND_10_/B
_CTAA_CC___GT__TTCCAG
35._POUND_10_/B
_CTAA_CC___GT__TTCCAG
36._POUND_10_/B
_CTAA_CC___GT__TTCCAG

Input profile: POUND_10_/B RUQ_1618

 
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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._POUND_10_/B

identical
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 9
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

2._POUND_10_/B

identical
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 1 > FP
 Dapeng Zhang, 2016

3._POUND_10_/B

identical
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 11 > F
 Dapeng Zhang, 2016

4._POUND_10_/B

identical
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 3 > FP
 Dapeng Zhang, 2016

5._POUND_10_/B

identical
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 7
 Dapeng Zhang, 2016

6._POUND_10_/B

identical
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8406 2
 Dapeng Zhang, 2016

7._POUND_10_/B

identical
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8406 10
 Dapeng Zhang, 2016

8._POUND_10_/B

identical
24 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F429 T13
 Dapeng Zhang, 2016

9._POUND_10_/B RUQ_1618

97.9 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

10._POUND_10_/B GC-01-115-6-12

97.6 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

11._POUND_10_/B GC-01-115-6-12

97.6 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018

12._POUND_10_/B GC-01-115-6-12

97.6 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

13._POUND_10_/B GC-01-115-6-12

97.6 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP3
 Mars, 2018

14._POUND_10_/B GC-08-162-4-05

97.6 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

15._POUND_10_/B GC-08-163-4-06

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

16._POUND_10_/B GC-08-163-4-06

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

17._POUND_10_/B GC-08-163-4-06

66.7 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

18._POUND_10_/B GC-08-162-4-05

64.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

19._POUND_10_/B GC-01-115-6-12

64.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP1
 Mars, 2018

20._POUND_10_/B GC-01-115-6-12

64.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

21._POUND_10_/B GC-08-162-4-05

64.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

22._POUND_10_/B GC-08-162-4-05

64.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

23._POUND_10_/B GC-08-162-4-05

64.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

24._POUND_10_/B GC-08-162-4-05

64.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

25._POUND_10_/B GC-08-162-4-05

64.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

26._POUND_10_/B

64.6 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8406 7
 Dapeng Zhang, 2016

27._POUND_10_/B GC-08-162-4-05

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

28._POUND_10_/B

56.3 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 10
 Dapeng Zhang, 2016

29._POUND_10_/B

56.3 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 8
 Dapeng Zhang, 2016

30._POUND_10_/B

56.3 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 6
 Dapeng Zhang, 2016

31._POUND_10_/B

56.3 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 10
 Dapeng Zhang, 2016

32._POUND_10_/B

56.3 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 2 > FP
 Dapeng Zhang, 2016

33._POUND_10_/B

56.3 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 2
 Dapeng Zhang, 2016

34._POUND_10_/B

56.3 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 4
 Dapeng Zhang, 2016

35._POUND_10_/B

56.3 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 5
 Dapeng Zhang, 2016

36._POUND_10_/B

54.3 %
23 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 11
 Dapeng Zhang, 2016

 

  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP998 32TcSNP999 33TcSNP1060 34TcSNP1063 35TcSNP1111
36TcSNP1126 37TcSNP1253 38TcSNP1309 39TcSNP1439 40TcSNP1442
41TcSNP1458 42TcSNP1484