SNP Profiles of POUND 4 /A   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTCCCCGGCCGGACCGAGCTGGGGAAGG
1._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
2._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
3._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
4._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
5._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
6._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
7._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
8._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
9._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
10._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
11._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
12._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
13._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
14._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
15._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
16._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
17._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
18._POUND_4_/B___
____CCGGCC__ACCGAGCT____AA__
19._POUND_4_/B___
TTCCCCGGCCGGACCGAGCTGGGGAAGG
20._POUND_4_/B___
TTCCCCGGCCGGACCGAGCTGGGGAAGG
21._POUND_4_/B___
TTCCCCGGCCGGACCGAGCTGGGGAAGG
22._POUND_4_/B___
TTCCCCGGCCGGACCGAGCTGGGGAAGG
23._POUND_4_/B___
TTCCCCGGCCGGACCGAGCTGGGGAAGG
24._POUND_4_/B___
TTCCCCGGCCGGACCGAGCTGGGGAAGG
25._POUND_4_/B___
TTCCCCGGCCGGACCGAGCTGGGGAAGG
26._POUND_4_/B___
TTCCCCGGCCGGACCGAGCTGGGGAAGG
27._POUND_4_/B___
TTCCCCGGCCGGACCGAGCTGGGGAAGG
28._POUND_4_/B___
TTCCCCGGCCGGACCGAGCTGGGGAAGG
29._POUND_4_/B___
TTCCCCGGCCGGACCGAGCTGGGGAAGG
30._POUND_4_/B___
TTCCCCGGCCGGACCGAGCTGGGGAAGG
31._POUND_4_/B___
TTCCCCGGCCGGACCGAGCTGGGGAAGG
32._POUND_4_/B___
TTCCCCGGCCGGACCGAGCTGGGGAAGG
33._POUND_4_/B___
TTCCCCGGCCGGACCGAGCTGGGGAAGG
34._POUND_4_/B___
TTCCCCGGCCGGACCGAGCTGGGGAAGG
35._POUND_4_/B___
TTCCCCGGCCGGACCGAGCTGGGGAAGG
36._POUND_4_/B___
____CCGGCT__ACCGAGCT____AA__
37._POUND_4_/B___
TTCCCCGGCTGGACCGAGCTGGGGAAGG
38._POUND_4_/B___
AACCCCCCGGGGACCGAGAGGGGGAACC
39._POUND_4_/B___
AACCCCCCGGGGACCGAGAGGGGGAACC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
GGCCCTGTCGAACCCTCTGGAGTTACCG
1._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
2._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
3._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
4._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
5._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
6._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
7._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
8._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
9._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
10._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
11._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
12._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
13._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
14._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
15._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
16._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
17._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
18._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
19._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
20._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
21._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
22._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
23._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
24._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
25._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
26._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
27._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
28._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
29._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
30._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
31._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
32._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
33._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
34._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
35._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
36._POUND_4_/B___
GGCCCTGTGGAA__CT__GG______CG
37._POUND_4_/B___
GGCCCTGTGGAACCCTTTGGAGTTACCG
38._POUND_4_/B___
__CC__ACCGAAGGAG__CCAGAAACCG
39._POUND_4_/B___
__CC__ACCGAAGGAG__CCAGAAACCG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGTTAACCCCGGGGTTGTCTCCTTCGAG
1._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
2._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
3._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
4._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
5._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
6._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
7._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
8._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
9._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
10._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
11._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
12._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
13._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
14._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
15._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
16._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
17._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
18._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
19._POUND_4_/B___
GGTTAACCCCGGGGTTGTTTCCTTCGAG
20._POUND_4_/B___
GGTTAACCCCGGGGTTGTTTCCTTCGAG
21._POUND_4_/B___
GGTTAACCCCGGGGTTGTTTCCTTCGAG
22._POUND_4_/B___
GGTTAACCCCGGGGTTGTTTCCTTCGAG
23._POUND_4_/B___
GGTTAACCCCGGGGTTGTTTCCTTCGAG
24._POUND_4_/B___
GGTTAACCCCGGGGTTGTTTCCTTCGAG
25._POUND_4_/B___
GGTTAACCCCGGGGTTGTTTCCTTCGAG
26._POUND_4_/B___
GGTTAACCCCGGGGTTGTTTCCTTCGAG
27._POUND_4_/B___
GGTTAACCCCGGGGTTGTTTCCTTCGAG
28._POUND_4_/B___
GGTTAACCCCGGGGTTGTTTCCTTCGAG
29._POUND_4_/B___
GGTTAACCCCGGGGTTGTTTCCTTCGAG
30._POUND_4_/B___
GGTTAACCCCGGGGTTGTTTCCTTCGAG
31._POUND_4_/B___
GGTTAACCCCGGGGTTGTTTCCTTCGAG
32._POUND_4_/B___
GGTTAACCCCGGGGTTGTTTCCTTCGAG
33._POUND_4_/B___
GGTTAACCCCGGGGTTGTTTCCTTCGAG
34._POUND_4_/B___
GGTTAACCCCGGGGTTGTTTCCTTCGAG
35._POUND_4_/B___
GGTTAACCCC__GGTTGTTTCCTTCGAG
36._POUND_4_/B___
__TTAA__CC______GT____TTCGAG
37._POUND_4_/B___
GGTTAACCCCGGGGTTGTTTCCTTCGAG
38._POUND_4_/B___
__AAAA__GGCCGG__AAAGGGAACGAG
39._POUND_4_/B___
__AAAA__GGCCGG__AAAGGGAACGAG

Input profile: POUND_4_/B RUQ_23

 
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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._POUND_4_/B

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5119 2
 Dapeng Zhang, 2016

2._POUND_4_/B

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 3
 Dapeng Zhang, 2016

3._POUND_4_/B

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 5
 Dapeng Zhang, 2016

4._POUND_4_/B

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 6
 Dapeng Zhang, 2016

5._POUND_4_/B

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 8
 Dapeng Zhang, 2016

6._POUND_4_/B

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 13
 Dapeng Zhang, 2016

7._POUND_4_/B

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 1 > FP
 Dapeng Zhang, 2016

8._POUND_4_/B

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 10 > F
 Dapeng Zhang, 2016

9._POUND_4_/B

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 11 > F
 Dapeng Zhang, 2016

10._POUND_4_/B

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 14 > F
 Dapeng Zhang, 2016

11._POUND_4_/B

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 2
 Dapeng Zhang, 2016

12._POUND_4_/B

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5119 4
 Dapeng Zhang, 2016

13._POUND_4_/B

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5119 5
 Dapeng Zhang, 2016

14._POUND_4_/B

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5119 1 > FP
 Dapeng Zhang, 2016

15._POUND_4_/B

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5408 2
 Dapeng Zhang, 2016

16._POUND_4_/B

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5408 3
 Dapeng Zhang, 2016

17._POUND_4_/B

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5408 5
 Dapeng Zhang, 2016

18._POUND_4_/B RUQ_23

97.9 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

19._POUND_4_/B GC-03-027-3-01

96.4 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

20._POUND_4_/B GC-03-27-3-01

96.4 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 3, Rep: 1, Tree: PL10
Notes: PL10 FP2
 Mars, 2018

21._POUND_4_/B GC-03-27-3-01

96.4 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 3, Rep: 1, Tree: PL11
Notes: PL11 FP4
 Mars, 2018

22._POUND_4_/B GC-03-27-3-01

96.4 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 3, Rep: 1, Tree: PL14
Notes: PL14 FP3
 Mars, 2018

23._POUND_4_/B GC-03-027-3-01

96.4 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

24._POUND_4_/B GC-03-027-3-01

96.4 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

25._POUND_4_/B GC-03-027-3-01

96.4 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

26._POUND_4_/B GC-03-027-3-01

96.4 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

27._POUND_4_/B GC-03-027-3-01

96.4 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

28._POUND_4_/B GC-05-019-1-19

96.4 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

29._POUND_4_/B GC-05-019-1-19

96.4 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

30._POUND_4_/B GC-05-019-1-19

96.4 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

31._POUND_4_/B GC-05-019-1-19

96.4 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

32._POUND_4_/B GC-05-155-4-08

96.4 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

33._POUND_4_/B GC-05-155-4-08

96.4 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

34._POUND_4_/B GC-05-155-4-08

96.4 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

35._POUND_4_/B GC-03-27-3-01

96.3 %
41 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 3, Rep: 1, Tree: PL1
Notes: PL1 FP1
 Mars, 2018

36._POUND_4_/B

95.8 %
24 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5408 4
 Dapeng Zhang, 2016

37._POUND_4_/B GC-05-155-4-08

95.2 %
42 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

38._POUND_4_/B

52.8 %
36 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: FP 3
 Mars, 2018

39._POUND_4_/B

52.8 %
36 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: FP 1
 Mars, 2018

 

  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP998 32TcSNP999 33TcSNP1060 34TcSNP1063 35TcSNP1111
36TcSNP1126 37TcSNP1253 38TcSNP1309 39TcSNP1439 40TcSNP1442
41TcSNP1458 42TcSNP1484