SNP Profiles of COCA 3308 /1 [CHA] View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CC	CC	AC	GG	TT	AA	CC	GG	CC	AA	GG	TT	CC	GG
1._MITC-000358	AG	CC	AC	AC	AG	GG	CC	GG	AA	AG	GG	AT	CC	__
2._COCA_3308/1_Fld#_186_Plt#_6	AG	AC	CC	CC	AG	AG	AA	AA	AG	AG	GG	AA	CG	__

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	GG	GG	CC	CC	TT	CC	GT	AA	TT	CC	CC	GG
1._MITC-000358	AC	__	CC	CG	CC	GG	AG	__	AC	AG	AA	CC	CG	__
2._COCA_3308/1_Fld#_186_Plt#_6	AC	__	AA	CC	CC	AG	AA	__	CC	GG	AC	AC	CG	__

	29	30	31	32	33	34	35	36	37	38	39	40	41
_Input profile	TT	AA	CC	CC	GG	GG	TT	GG	CC	CC	TT	CC	GG	X_X
1._MITC-000358	AG	AA	__	GG	CC	GG	__	AA	AG	GG	AG	CC	AG	X_X
2._COCA_3308/1_Fld#_186_Plt#_6	AG	AG	__	AG	CC	GG	__	CC	AG	AA	AG	CC	AG	X_X

Input profile: COCA_3308_/1_[CHA] RUQ_102

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._COCA_3308_/1_[CHA] MITC-000358

41.4 %
35 shared markers

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USDA-SHRS, United States of America

2._COCA_3308_/1_[CHA] COCA_3308/1_Fld#_186_Plt#_6

25.7 %
35 shared markers

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USDA-TARS, United States of America

Location: Field: 186, Tree: 6

Notes: TARS_Cacao_collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP230	9	TcSNP242	10	TcSNP329
11	TcSNP364	12	TcSNP372	13	TcSNP448	14	TcSNP469	15	TcSNP529
16	TcSNP534	17	TcSNP560	18	TcSNP577	19	TcSNP591	20	TcSNP602
21	TcSNP619	22	TcSNP702	23	TcSNP723	24	TcSNP731	25	TcSNP799
26	TcSNP823	27	TcSNP872	28	TcSNP878	29	TcSNP891	30	TcSNP998
31	TcSNP999	32	TcSNP1060	33	TcSNP1063	34	TcSNP1111	35	TcSNP1126
36	TcSNP1253	37	TcSNP1309	38	TcSNP1439	39	TcSNP1442	40	TcSNP1458
41	TcSNP1484