SNP Profiles of EET 397 [ECU] View Data

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_Input profile	TT	CC	GG	GG	CC	CC	AA	CT	GG	TT	CC	AG	AA	CC
1._RUQ_759	__	AC	__	__	__	__	AA	__	GG	__	__	__	AA	__
2._RUQ_759	__	AC	__	__	__	__	AA	__	GG	__	__	__	AA	__
3._EET_397_[ECU]	__	AC	GG	__	CC	CC	AA	CT	__	AT	__	AG	AA	CC
4._EET_397_[ECU]	__	AC	GG	__	CC	CC	AA	CT	__	AT	__	AG	AA	CC
5._EET_397_[ECU]	__	AC	GG	__	CC	CC	AA	CT	__	AT	__	AG	AA	CC
6._EET_397_[ECU]	__	AC	GG	__	CC	CC	AA	CT	__	AT	__	AG	AA	CC
7._EET_397_[ECU]	__	AC	GG	__	CC	CC	AA	CT	__	AT	__	AG	AA	CC
8._EET_397_[ECU]	__	AC	GG	__	CC	CC	AA	CT	__	AT	__	AG	AA	CC
9._RUQ_759	__	AC	GG	__	CC	CC	AA	CT	__	AT	__	AG	AA	CC
10._EET_397_[ECU]	__	AC	GG	__	CC	CC	__	CT	__	AT	__	AG	AA	CC
11._EET_397_[ECU]	__	AC	GG	__	CC	__	AA	CT	__	AT	__	AG	AA	CC
12._GC-08-274-8-46	TT	AC	GG	GG	CC	CC	AA	CT	GG	AT	CG	AG	AA	CC
13._GC-08-274-8-46	TT	AC	GG	GG	CC	CC	AA	CT	GG	AT	CG	AG	AA	CC
14._GC-08-274-8-46	TT	AC	GG	GG	CC	CC	AA	CT	GG	AT	CG	AG	AA	CC
15._GC-08-274-8-46	TT	AC	GG	GG	CC	CC	AA	CT	GG	AT	CG	AG	AA	CC
16._GC-08-274-8-46	TT	AC	GG	GG	CC	CC	AA	CT	GG	AT	CG	AG	AA	CC
17._GC-08-274-8-46	TT	AC	GG	GG	CC	CC	AA	CT	GG	AT	CG	AG	AA	CC
18._GC-08-274-8-46	TT	AC	GG	GG	CC	CC	__	CT	GG	AT	CG	AG	AA	CC
19._RUQ_759	AA	AC	CC	GG	CC	GG	AA	AG	GG	AT	CG	__	AA	__
20._EET_397_[ECU]_Fld#_117_Plt#_2	AA	AC	CC	GG	CC	GG	AA	AG	GG	AT	CG	__	AA	__

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	CG	CT	TT	GG	AA	TT	CC	CG	GG	CT	AA	CC	CC
1._RUQ_759	__	CG	CT	__	GG	AA	__	CC	CG	__	__	AA	CC	__
2._RUQ_759	__	CG	CT	__	GG	AA	__	CC	CG	__	__	AA	CC	__
3._EET_397_[ECU]	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
4._EET_397_[ECU]	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
5._EET_397_[ECU]	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
6._EET_397_[ECU]	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
7._EET_397_[ECU]	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
8._EET_397_[ECU]	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
9._RUQ_759	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
10._EET_397_[ECU]	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
11._EET_397_[ECU]	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
12._GC-08-274-8-46	GG	CG	CT	TT	GG	AA	TT	CC	CG	GG	CT	AA	CC	CC
13._GC-08-274-8-46	GG	CG	CT	TT	GG	AA	TT	CC	CG	GG	CT	AA	CC	CC
14._GC-08-274-8-46	GG	CG	CT	TT	GG	AA	TT	CC	CG	GG	CT	AA	CC	CC
15._GC-08-274-8-46	GG	CG	CT	TT	GG	AA	TT	CC	CG	GG	CT	AA	CC	CC
16._GC-08-274-8-46	GG	CG	CT	TT	GG	AA	TT	CC	CG	GG	CT	AA	CC	CC
17._GC-08-274-8-46	GG	CG	CT	TT	GG	AA	TT	CC	CG	GG	CT	AA	CC	CC
18._GC-08-274-8-46	GG	CG	CT	TT	GG	AA	TT	CC	CG	GG	CT	AA	CC	CC
19._RUQ_759	CC	CG	AG	AA	CC	AA	AA	CC	CG	__	AG	AA	__	GG
20._EET_397_[ECU]_Fld#_117_Plt#_2	CC	CG	AG	AA	CC	AA	AA	CC	CG	__	AG	AA	__	GG

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_Input profile	GG	AT	GG	CT	CC	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
1._RUQ_759	__	__	GG	__	__	__	CC	__	X_X	X_X	X_X	X_X	X_X	X_X
2._RUQ_759	__	__	GG	__	__	__	CC	__	X_X	X_X	X_X	X_X	X_X	X_X
3._EET_397_[ECU]	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
4._EET_397_[ECU]	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
5._EET_397_[ECU]	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
6._EET_397_[ECU]	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
7._EET_397_[ECU]	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
8._EET_397_[ECU]	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
9._RUQ_759	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
10._EET_397_[ECU]	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
11._EET_397_[ECU]	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
12._GC-08-274-8-46	GG	AT	GG	TT	CC	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
13._GC-08-274-8-46	GG	AT	GG	TT	CC	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
14._GC-08-274-8-46	GG	AT	GG	TT	CC	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
15._GC-08-274-8-46	GG	AT	GG	TT	CC	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
16._GC-08-274-8-46	GG	AT	GG	TT	CC	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
17._GC-08-274-8-46	GG	AT	GG	TT	CC	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
18._GC-08-274-8-46	GG	AT	GG	TT	CC	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
19._RUQ_759	GG	__	CC	AG	GG	AA	GG	GG	X_X	X_X	X_X	X_X	X_X	X_X
20._EET_397_[ECU]_Fld#_117_Plt#_2	GG	__	CC	AG	GG	AA	GG	GG	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: EET_397_[ECU] RUQ_759

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._EET_397_[ECU] RUQ_759

96.4 %
14 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

Ame
0.053 Nac
0.406 Sca
0.491

2._EET_397_[ECU] RUQ_759

96.4 %
14 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

Ame
0.053 Nac
0.406 Sca
0.491

3._EET_397_[ECU]

95.5 %
22 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8846 9

Dapeng Zhang, 2016

4._EET_397_[ECU]

95.5 %
22 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8846 7

Dapeng Zhang, 2016

5._EET_397_[ECU]

95.5 %
22 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8846 6

Dapeng Zhang, 2016

6._EET_397_[ECU]

95.5 %
22 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8846 5

Dapeng Zhang, 2016

7._EET_397_[ECU]

95.5 %
22 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8846 4

Dapeng Zhang, 2016

8._EET_397_[ECU]

95.5 %
22 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8846 1

Dapeng Zhang, 2016

9._EET_397_[ECU] RUQ_759

95.5 %
22 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

10._EET_397_[ECU]

95.2 %
21 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8846 2

Dapeng Zhang, 2016

11._EET_397_[ECU]

95.2 %
21 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B F456 T11

Dapeng Zhang, 2016

12._EET_397_[ECU] GC-08-274-8-46

94.4 %
36 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

13._EET_397_[ECU] GC-08-274-8-46

94.4 %
36 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

14._EET_397_[ECU] GC-08-274-8-46

94.4 %
36 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

15._EET_397_[ECU] GC-08-274-8-46

94.4 %
36 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

16._EET_397_[ECU] GC-08-274-8-46

94.4 %
36 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

17._EET_397_[ECU] GC-08-274-8-46

94.4 %
36 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

18._EET_397_[ECU] GC-08-274-8-46

94.3 %
35 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

19._EET_397_[ECU] RUQ_759

43.5 %
31 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

20._EET_397_[ECU] EET_397_[ECU]_Fld#_117_Plt#_2

43.5 %
31 shared markers

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USDA-TARS, United States of America

Location: Field: 117, Tree: 2

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP144	3	TcSNP150	4	TcSNP174	5	TcSNP193
6	TcSNP226	7	TcSNP230	8	TcSNP242	9	TcSNP329	10	TcSNP372
11	TcSNP448	12	TcSNP469	13	TcSNP529	14	TcSNP534	15	TcSNP560
16	TcSNP577	17	TcSNP602	18	TcSNP619	19	TcSNP723	20	TcSNP731
21	TcSNP799	22	TcSNP823	23	TcSNP872	24	TcSNP878	25	TcSNP891
26	TcSNP998	27	TcSNP999	28	TcSNP1060	29	TcSNP1111	30	TcSNP1126
31	TcSNP1253	32	TcSNP1309	33	TcSNP1439	34	TcSNP1442	35	TcSNP1458
36	TcSNP1484