SNP Profiles of OC 61 [VEN] View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CT	AG
1._EQX_/O_[CHA]___	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CT	AG
2._EQX_/O_[CHA]___	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CT	AG
3._EQX_/O_[CHA]___	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CT	AG
4._EQX_/O_[CHA]___	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CT	AG
5._EQX_/O_[CHA]___	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CT	AG
6._EQX_/O_[CHA]___	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CT	AG
7._EQX_/O_[CHA]___	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CT	AG
8._EQX_/O_[CHA]___	CT	AG	GG	CC	TT	AC	CC	TT	CC	CT	AA	AA	CC	AG
9._EQX_/O_[CHA]___	CT	AG	GG	CC	TT	AC	CC	TT	CC	CT	AA	AA	CC	AG
10._EQX_/O_[CHA]___	CC	GG	GG	CC	TT	AC	CC	TT	CC	CC	AA	AG	CC	__
11._EQX_/O_[CHA]___	CC	GG	GG	CC	TT	AC	CC	TT	CC	CC	AA	AG	CC	__
12._EQX_/O_[CHA]___	__	AG	__	TT	__	__	__	TT	__	__	__	__	CC	AA
13._EQX_/O_[CHA]___	CC	AG	CC	TT	TT	AC	CT	TT	CT	CC	AA	AG	CC	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	TT	AA	GG	TT	CC	CC	GT	GG	TT	AC	CG	TT	TT	CC
1._EQX_/O_[CHA]___	TT	AA	GG	TT	CC	CC	GT	GG	TT	AC	CG	TT	TT	CC
2._EQX_/O_[CHA]___	TT	AA	GG	TT	CC	CC	GT	GG	TT	AC	CG	TT	TT	CC
3._EQX_/O_[CHA]___	TT	AA	GG	TT	CC	CC	GT	GG	TT	AC	CG	TT	TT	CC
4._EQX_/O_[CHA]___	TT	AA	GG	TT	CC	CC	GT	GG	TT	AC	CG	TT	TT	CC
5._EQX_/O_[CHA]___	TT	AA	GG	TT	CC	CC	GT	GG	TT	AC	CG	TT	TT	CC
6._EQX_/O_[CHA]___	TT	AA	GG	TT	CC	CC	GT	GG	TT	AC	CG	TT	TT	CC
7._EQX_/O_[CHA]___	TT	AA	GG	TT	CC	CC	GT	GG	TT	AC	CG	TT	TT	CC
8._EQX_/O_[CHA]___	CT	AA	GG	CT	CC	GG	GG	AG	TT	AC	CC	TT	CT	AC
9._EQX_/O_[CHA]___	CT	AA	GG	CT	CC	GG	GG	AG	TT	AC	CC	TT	CT	AC
10._EQX_/O_[CHA]___	CT	AA	CC	CT	CC	GG	GG	AG	TT	CC	CG	GT	CC	AC
11._EQX_/O_[CHA]___	CT	AA	CC	CT	CC	GG	GG	AG	TT	CC	CG	GT	CC	AC
12._EQX_/O_[CHA]___	__	__	__	__	CT	CG	GT	__	CT	AC	CG	GT	CT	AC
13._EQX_/O_[CHA]___	TT	AA	GG	TT	CT	CG	GT	AA	CT	AC	GG	GT	CT	AC

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	AG	GG	AA	CC	GG	CC	AA	CC	GT	AC	TT	GG	X_X	X_X
1._EQX_/O_[CHA]___	AG	GG	AA	CC	GG	CC	AA	CC	GT	AC	TT	GG	X_X	X_X
2._EQX_/O_[CHA]___	AG	GG	AA	CC	GG	CC	AA	CC	GT	AC	TT	GG	X_X	X_X
3._EQX_/O_[CHA]___	AG	GG	AA	CC	GG	CC	AA	CC	GT	AC	TT	GG	X_X	X_X
4._EQX_/O_[CHA]___	AG	GG	AA	CC	GG	CC	AA	CC	GT	AC	TT	GG	X_X	X_X
5._EQX_/O_[CHA]___	AG	GG	AA	CC	GG	CC	AA	CC	GT	AC	TT	GG	X_X	X_X
6._EQX_/O_[CHA]___	AG	GG	AA	CC	GG	CC	AA	CC	GT	AC	TT	GG	X_X	X_X
7._EQX_/O_[CHA]___	AG	GG	AA	CC	GG	CC	AA	CC	GT	AC	TT	GG	X_X	X_X
8._EQX_/O_[CHA]___	AA	GG	AA	CC	AG	CC	AA	CC	GT	AC	AT	GG	X_X	X_X
9._EQX_/O_[CHA]___	AA	GG	AA	CC	AG	CC	AA	CC	GT	AC	AT	GG	X_X	X_X
10._EQX_/O_[CHA]___	AA	GG	AA	CC	AG	CC	CC	CC	GG	CC	AT	GG	X_X	X_X
11._EQX_/O_[CHA]___	AA	GG	AA	CC	AG	CC	CC	CC	GG	CC	AT	GG	X_X	X_X
12._EQX_/O_[CHA]___	AG	__	AT	CC	AA	CG	CC	TT	GG	AC	__	__	X_X	X_X
13._EQX_/O_[CHA]___	AG	AG	AT	CC	AA	CG	CC	TT	GG	AC	AA	GG	X_X	X_X

Input profile: EQX_/O_[CHA]

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Mars Center for Cocoa Science, Brazil

Location: 7421 3

Dapeng Zhang, 2016

1._EQX_/O_[CHA]

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 7522 4 > FP

Dapeng Zhang, 2016

2._EQX_/O_[CHA]

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 7522 2 > FP

Dapeng Zhang, 2016

3._EQX_/O_[CHA]

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 7421 1

Dapeng Zhang, 2016

4._EQX_/O_[CHA] GC-07-077-4-21

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

5._EQX_/O_[CHA] GC-07-077-4-21

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

6._EQX_/O_[CHA] GC-07-087-5-22

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

7._EQX_/O_[CHA] GC-07-087-5-22

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4 > FP3

8._EQX_/O_[CHA]

77.5 %
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 7522 1 > FP

Dapeng Zhang, 2016

9._EQX_/O_[CHA] GC-07-087-5-22

77.5 %
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

10._EQX_/O_[CHA]

61.5 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 7421 2

Dapeng Zhang, 2016

11._EQX_/O_[CHA] GC-07-077-4-21

61.5 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

12._EQX_/O_[CHA] RUQ_138

58.7 %
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

13._EQX_/O_[CHA] RUQ_138

56.3 %
40 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25