SNP Profiles of GU-154C   View Data

 Show/Hide Profiles

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
1._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
2._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
3._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
4._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
5._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
6._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
7._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
8._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
9._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
10._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
11._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
12._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
13._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
14._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
15._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
16._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
17._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
18._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
19._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
20._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
21._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
22._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGG__AGCC
23._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
24._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
25._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGG__AGCC
26._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
27._GU_154_/C___
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
28._GU_154_/C___
GGGGCGGGAAAAAA____AAGGGGAGGG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAGGCCCCGGGGGGCCACCCGGCCAAGG
1._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
2._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
3._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
4._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
5._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
6._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
7._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
8._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
9._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
10._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
11._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
12._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
13._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
14._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
15._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
16._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
17._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
18._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
19._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
20._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
21._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
22._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
23._GU_154_/C___
AAGGCCCCGGGG__CCACCCGGCCAAGG
24._GU_154_/C___
AAGGCCCCGGGG__CCACCCGGCCAAGG
25._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
26._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
27._GU_154_/C___
AAGGCCCCGGGGGGCCACCCGGCCAAGG
28._GU_154_/C___
AAGGGGGGCCCC__GGACCCCC__AA__
 29 30 31 32 33 34 35 36 37 38 39    
_Input profile
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
1._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
2._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
3._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
4._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
5._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
6._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
7._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
8._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
9._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
10._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
11._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
12._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
13._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
14._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
15._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
16._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
17._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
18._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
19._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
20._GU_154_/C___
GG__CCGGCCAATTTTAAATGGX_XX_XX_X
21._GU_154_/C___
GGAACCGGCC__TTTTAAATGGX_XX_XX_X
22._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
23._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
24._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
25._GU_154_/C___
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
26._GU_154_/C___
GGAACCGGCC__TTTTAAATGGX_XX_XX_X
27._GU_154_/C___
GG__CCGGCCAATTTTAAATGGX_XX_XX_X
28._GU_154_/C___
GGAAGGGGGGAAAAAAAAATGGX_XX_XX_X

Input profile: GU_154_/C

 
Mars Center for Cocoa Science, Brazil
Location: 1414 12 > F
 Dapeng Zhang, 2016

1._GU_154_/C GC-01-078-4-14

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

2._GU_154_/C GC-01-078-4-14

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15 > FP4
 Mars, 2018

3._GU_154_/C GC-01-078-4-14

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

4._GU_154_/C GC-01-078-4-14

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

5._GU_154_/C GC-01-078-4-14

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP3
 Mars, 2018

6._GU_154_/C GC-01-078-4-14

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018

7._GU_154_/C GC-01-078-4-14

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

8._GU_154_/C GC-01-078-4-14

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

9._GU_154_/C GC-01-078-4-14

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

10._GU_154_/C GC-01-078-4-14

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

11._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 15 > F
 Dapeng Zhang, 2016

12._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 2
 Dapeng Zhang, 2016

13._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 3
 Dapeng Zhang, 2016

14._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 4
 Dapeng Zhang, 2016

15._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 9
 Dapeng Zhang, 2016

16._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 13
 Dapeng Zhang, 2016

17._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 14
 Dapeng Zhang, 2016

18._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 16
 Dapeng Zhang, 2016

19._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 10 > F
 Dapeng Zhang, 2016

20._GU_154_/C GC-01-078-4-14

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

21._GU_154_/C GC-01-078-4-14

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

22._GU_154_/C GC-01-078-4-14

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

23._GU_154_/C GC-01-078-4-14

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

24._GU_154_/C

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 5
 Dapeng Zhang, 2016

25._GU_154_/C

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 7
 Dapeng Zhang, 2016

26._GU_154_/C

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 8
 Dapeng Zhang, 2016

27._GU_154_/C

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 1 > FP
 Dapeng Zhang, 2016

28._GU_154_/C GC-01-78-4-14

50 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 14, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1270 7TcSNP1253 8TcSNP1165 9TcSNP1144 10TcSNP1075
11TcSNP1062 12TcSNP1060 13TcSNP998 14TcSNP994 15TcSNP953
16TcSNP929 17TcSNP917 18TcSNP891 19TcSNP872 20TcSNP723
21TcSNP645 22TcSNP619 23TcSNP591 24TcSNP577 25TcSNP560
26TcSNP534 27TcSNP529 28TcSNP469 29TcSNP429 30TcSNP372
31TcSNP242 32TcSNP230 33TcSNP226 34TcSNP193 35TcSNP151
36TcSNP150 37TcSNP144 38TcSNP32 39TcSNP25