SNP Profiles of NACIONAL View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	AA	GG	CC	AA	CC	TT	CC	TT	AA	AA	CC	GG	TT
1._GU_207_/H___	TT	AA	GG	CC	AA	CC	TT	CC	TT	AA	AA	CC	GG	TT
2._GU_207_/H___	TT	AA	GG	CC	AA	CC	TT	CC	TT	AA	AA	CC	GG	TT
3._GU_207_/H___	TT	AA	GG	CC	AA	CC	TT	CC	TT	AA	AA	CC	GG	TT
4._GU_207_/H___	TT	AA	GG	CC	AA	CC	TT	CC	TT	AA	AA	CC	GG	TT
5._GU_207_/H___	TT	AA	GG	CC	AA	CC	TT	CC	TT	AA	AA	CC	GG	TT
6._GU_207_/H___	TT	AA	GG	CC	AA	CC	TT	CC	TT	AA	AA	CC	GG	TT
7._GU_207_/H___	TT	AA	GG	CC	AA	CC	TT	CC	TT	AA	AA	CC	GG	TT
8._GU_207_/H___	TT	AA	GG	CC	AA	CC	TT	CC	TT	AA	AA	CC	GG	TT
9._GU_207_/H___	TT	AA	GG	CC	AA	CC	TT	CC	TT	AA	AA	CC	GG	TT
10._GU_207_/H___	__	GG	GG	CC	__	__	TT	__	__	__	__	CC	GG	__
11._GU_207_/H___	CC	GG	GG	CC	CC	TT	TT	CC	CC	AA	GG	CC	GG	CC
12._GU_207_/H___	__	__	GG	__	__	__	TT	__	CC	__	GG	__	GG	__

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	GG	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
1._GU_207_/H___	AA	GG	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
2._GU_207_/H___	AA	GG	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
3._GU_207_/H___	AA	GG	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
4._GU_207_/H___	AA	GG	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
5._GU_207_/H___	AA	GG	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
6._GU_207_/H___	AA	GG	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
7._GU_207_/H___	AA	GG	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
8._GU_207_/H___	AA	GG	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
9._GU_207_/H___	AA	GG	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
10._GU_207_/H___	__	__	__	CC	GG	GG	__	CC	CC	CC	GG	CC	AA	GG
11._GU_207_/H___	AA	GG	CC	CC	GG	GG	AA	CC	CC	CC	GG	CC	AA	GG
12._GU_207_/H___	__	__	__	__	GG	GG	AA	__	CC	CC	__	__	AA	__

	29	30	31	32	33	34	35	36	37	38
_Input profile	GG	AA	CC	AA	CC	AA	CC	TT	TT	GG	X_X	X_X	X_X	X_X
1._GU_207_/H___	GG	AA	CC	AA	CC	AA	CC	TT	TT	GG	X_X	X_X	X_X	X_X
2._GU_207_/H___	GG	AA	CC	AA	CC	AA	CC	TT	TT	GG	X_X	X_X	X_X	X_X
3._GU_207_/H___	GG	AA	CC	AA	CC	AA	CC	TT	TT	GG	X_X	X_X	X_X	X_X
4._GU_207_/H___	GG	AA	CC	AA	CC	AA	CC	TT	TT	GG	X_X	X_X	X_X	X_X
5._GU_207_/H___	GG	AA	CC	AA	CC	AA	CC	TT	TT	GG	X_X	X_X	X_X	X_X
6._GU_207_/H___	GG	AA	CC	AA	CC	AA	CC	TT	TT	GG	X_X	X_X	X_X	X_X
7._GU_207_/H___	GG	AA	CC	AA	CC	AA	CC	TT	TT	GG	X_X	X_X	X_X	X_X
8._GU_207_/H___	GG	AA	CC	AA	CC	AA	CC	TT	TT	GG	X_X	X_X	X_X	X_X
9._GU_207_/H___	GG	AA	CC	AA	CC	__	CC	TT	TT	GG	X_X	X_X	X_X	X_X
10._GU_207_/H___	__	AA	CC	GG	CC	AA	TT	TT	__	__	X_X	X_X	X_X	X_X
11._GU_207_/H___	AG	AA	CC	GG	CC	AA	TT	GT	TT	GG	X_X	X_X	X_X	X_X
12._GU_207_/H___	__	__	__	GG	__	__	__	__	__	__	X_X	X_X	X_X	X_X

Input profile: GU_207_/H

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Mars Center for Cocoa Science, Brazil

Location: 1311 13

Dapeng Zhang, 2016

1._GU_207_/H

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1311 6 > FP

Dapeng Zhang, 2016

2._GU_207_/H

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1311 12 > F

Dapeng Zhang, 2016

3._GU_207_/H

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1311 1 > FP

Dapeng Zhang, 2016

4._GU_207_/H

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1311 11

Dapeng Zhang, 2016

5._GU_207_/H

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1311 10

Dapeng Zhang, 2016

6._GU_207_/H

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1311 9

Dapeng Zhang, 2016

7._GU_207_/H

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1311 7

Dapeng Zhang, 2016

8._GU_207_/H

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1311 4

Dapeng Zhang, 2016

9._GU_207_/H

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1311 2

Dapeng Zhang, 2016

10._GU_207_/H RUQ_225

60.9 %
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

11._GU_207_/H RUQ_225

52.6 %
38 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

12._GU_207_/H RUQ_225

50 %
12 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1350
6	TcSNP1270	7	TcSNP1253	8	TcSNP1165	9	TcSNP1144	10	TcSNP1075
11	TcSNP1062	12	TcSNP1060	13	TcSNP998	14	TcSNP994	15	TcSNP953
16	TcSNP929	17	TcSNP917	18	TcSNP891	19	TcSNP872	20	TcSNP723
21	TcSNP645	22	TcSNP619	23	TcSNP591	24	TcSNP577	25	TcSNP560
26	TcSNP534	27	TcSNP529	28	TcSNP469	29	TcSNP429	30	TcSNP372
31	TcSNP242	32	TcSNP230	33	TcSNP226	34	TcSNP193	35	TcSNP151
36	TcSNP150	37	TcSNP32	38	TcSNP25