SNP Profiles of GU-221H   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCAGCCCCTTAATTGTTTCCATGGCCAA
1._GU_221_/H___
CCAGCCCCTTAATTGTTTCCATGGCCAA
2._GU_221_/H___
CCAGGGCCTT__TTTTCCCCAAGGCCAA
3._GU_221_/H___
CCAGGGCCTT__TTTTCCCCAAGGCCAA
4._GU_221_/H___
CCAGGGCCTT__TTTTCCCCAAGGCCAA
5._GU_221_/H___
CCAGGGCCTT__TTTTCCCCAAGGCCAA
6._GU_221_/H___
CCAGGGCCTT__TTTTCCCCAAGGCCAA
7._GU_221_/H___
CCAGGGCCTT__TTTTCCCCAAGGCCAA
8._GU_221_/H___
CCAGGGCCTT__TTTTCCCCAAGGCCAA
9._GU_221_/H___
CCAGGGCCTT__TTTTCCCCAAGGCCAA
10._GU_221_/H___
CCAGGGCCTT__TTTTCCCCAAGGCCAA
11._GU_221_/H___
CCAGGGCCTT__TTTTCCCCAAGGCCAA
12._GU_221_/H___
CCAGGGCCTT__TTTTCCCCAAGGCCAA
13._GU_221_/H___
CCAGGGCCTT__TTTTCCCCAAGGCCAA
14._GU_221_/H___
CCAGGGCCTT__TTTTCCCCAAGGCCAA
15._GU_221_/H___
CCAGGGCCTT__TTTTCCCCAAGGCCAA
16._GU_221_/H___
GGAGCCGGAA__AAAA____AAGGGGAA
17._GU_221_/H___
GGAGCCGGAACCAAAA____AAGGGGAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCTTCGCTTTCCGGAATTCCGGGGCCAC
1._GU_221_/H___
CCTTCGCTTTCCGGAATTCCGGGGCCAC
2._GU_221_/H___
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
3._GU_221_/H___
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
4._GU_221_/H___
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
5._GU_221_/H___
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
6._GU_221_/H___
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
7._GU_221_/H___
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
8._GU_221_/H___
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
9._GU_221_/H___
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
10._GU_221_/H___
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
11._GU_221_/H___
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
12._GU_221_/H___
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
13._GU_221_/H___
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
14._GU_221_/H___
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
15._GU_221_/H___
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
16._GU_221_/H___
AAAAGGGGGGCCCC__GGCCCCCC__AA
17._GU_221_/H___
AAAAGGGGGGCCCC__GGCCCCCC__AA
 29 30 31 32 33 34 35 36 37 38 39 40   
_Input profile
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
1._GU_221_/H___
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
2._GU_221_/H___
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
3._GU_221_/H___
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
4._GU_221_/H___
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
5._GU_221_/H___
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
6._GU_221_/H___
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
7._GU_221_/H___
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
8._GU_221_/H___
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
9._GU_221_/H___
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
10._GU_221_/H___
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
11._GU_221_/H___
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
12._GU_221_/H___
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
13._GU_221_/H___
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
14._GU_221_/H___
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
15._GU_221_/H___
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
16._GU_221_/H___
__GGAAGGGGGGAAAAAAAAAAGGX_XX_X
17._GU_221_/H___
__GGAAGGGGGGAAAAAAAAAAGGX_XX_X

Input profile: GU_221_/H

 
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Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 4 > FP
 Dapeng Zhang, 2016

1._GU_221_/H GC-01-074-4-10

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

2._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

3._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

4._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14 > FP4
 Mars, 2018

5._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP2
 Mars, 2018

6._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

7._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

8._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

9._GU_221_/H

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 6
 Dapeng Zhang, 2016

10._GU_221_/H

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 9
 Dapeng Zhang, 2016

11._GU_221_/H

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 15
 Dapeng Zhang, 2016

12._GU_221_/H

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 16
 Dapeng Zhang, 2016

13._GU_221_/H

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 1 > FP
 Dapeng Zhang, 2016

14._GU_221_/H

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 12 > F
 Dapeng Zhang, 2016

15._GU_221_/H

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 14 > F
 Dapeng Zhang, 2016

16._GU_221_/H GC-01-74-4-10

39.7 %
34 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 10, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

17._GU_221_/H GU_221_H_Fld#_162_Plt#_1

38.6 %
35 shared markers

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USDA-TARS, United States of America
Location: Field: 162, Tree: 1
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25