SNP Profiles of HUALLAGA 3 View Data

Show/Hide Profiles

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CC	AA	GG	TT	TT	AC	TT	GG	CC	CC	AT	GG	CC	AA
1._HUALLAGA_3	CC	AA	GG	TT	TT	AC	TT	GG	CC	CC	AT	GG	CC	AA
2._HUALLAGA_3	CC	AA	GG	TT	TT	AC	TT	GG	CC	CC	AT	GG	CC	AA
3._HUALLAGA_3	CC	AA	GG	TT	TT	AC	TT	GG	CC	CC	AT	GG	CC	AA
4._HUALLAGA_3	CC	AA	GG	TT	TT	AC	TT	GG	CC	CC	AT	GG	CC	AA
5._GC-08-156-3-55	CC	AA	GG	TT	TT	AC	TT	GG	CC	CC	AT	GG	CC	AA
6._GC-08-156-3-55	CC	AA	GG	TT	TT	AC	TT	GG	CC	CC	AT	GG	CC	AA
7._GC-08-156-3-55	CC	AA	GG	TT	TT	AC	TT	GG	CC	CC	AT	GG	CC	AA
8._GC-08-156-3-55	CC	AA	GG	TT	TT	AC	TT	GG	CC	CC	AT	GG	CC	AA
9._GC-08-156-3-55	CC	AA	GG	TT	TT	AC	TT	GG	CC	CC	AT	GG	CC	AA
10._HUALLAGA_3	CC	AG	GG	TT	TT	AC	TT	GG	CC	CC	AT	GG	CC	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CT	AA	GG	CC	CT	GG	GT	AA	CC	AA	GG	CC	CC	AA
1._HUALLAGA_3	CT	AA	GG	CC	CT	GG	GT	AA	CC	AA	GG	CC	CC	AA
2._HUALLAGA_3	CT	AA	GG	CC	CT	GG	GT	AA	CC	AA	GG	CC	CC	AA
3._HUALLAGA_3	CT	AA	GG	CC	CT	GG	GT	AA	CC	AA	GG	CC	CC	AA
4._HUALLAGA_3	CT	AA	GG	CC	CT	GG	GT	AA	CC	AA	GG	CC	CC	AA
5._GC-08-156-3-55	CT	AA	GG	CC	CT	GG	GT	AA	CC	AA	GG	CC	CC	AA
6._GC-08-156-3-55	CT	AA	GG	CC	CT	GG	GT	AA	CC	AA	GG	CC	CC	AA
7._GC-08-156-3-55	CT	AA	GG	CC	CT	GG	GT	AA	CC	AA	GG	CC	CC	AA
8._GC-08-156-3-55	CT	AA	GG	CC	CT	GG	GT	AA	CC	AA	GG	CC	CC	AA
9._GC-08-156-3-55	CT	AA	GG	CC	CT	GG	GT	AA	CC	AA	GG	CC	CC	AA
10._HUALLAGA_3	CT	AA	GG	CC	CT	GG	GT	AA	CC	AA	GG	CC	CC	AA

	29	30	31	32	33	34	35	36	37	38	39
_Input profile	GG	AA	CT	AG	GG	AA	CT	GT	CC	TT	GG	X_X	X_X	X_X
1._HUALLAGA_3	GG	AA	CT	AG	GG	AA	CT	GT	CC	TT	GG	X_X	X_X	X_X
2._HUALLAGA_3	GG	AA	CT	AG	GG	AA	CT	GT	CC	TT	GG	X_X	X_X	X_X
3._HUALLAGA_3	GG	AA	CT	AG	GG	AA	CT	GT	CC	TT	GG	X_X	X_X	X_X
4._HUALLAGA_3	GG	AA	CT	AG	GG	AA	CT	GT	CC	TT	GG	X_X	X_X	X_X
5._GC-08-156-3-55	GG	AA	CT	AG	GG	AA	CT	GT	CC	TT	GG	X_X	X_X	X_X
6._GC-08-156-3-55	GG	AA	CT	AG	GG	AA	CT	GT	CC	TT	GG	X_X	X_X	X_X
7._GC-08-156-3-55	GG	AA	CT	AG	GG	AA	CT	GT	CC	TT	GG	X_X	X_X	X_X
8._GC-08-156-3-55	GG	AA	CT	AG	GG	AA	CT	GT	CC	TT	GG	X_X	X_X	X_X
9._GC-08-156-3-55	GG	AA	CT	AG	GG	AA	CT	GT	CC	TT	GG	X_X	X_X	X_X
10._HUALLAGA_3	GG	AA	TT	AG	GG	AA	CT	GT	CC	TT	GG	X_X	X_X	X_X

Input profile: HUALLAGA_3

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8355 1

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

1._HUALLAGA_3

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8355 10

Dapeng Zhang, 2016

2._HUALLAGA_3

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8355 8

Dapeng Zhang, 2016

3._HUALLAGA_3

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8355 6

Dapeng Zhang, 2016

4._HUALLAGA_3

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8355 5

Dapeng Zhang, 2016

5._HUALLAGA_3 GC-08-156-3-55

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

6._HUALLAGA_3 GC-08-156-3-55

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

7._HUALLAGA_3 GC-08-156-3-55

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

8._HUALLAGA_3 GC-08-156-3-55

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8

9._HUALLAGA_3 GC-08-156-3-55

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 10

Notes: 10

10._HUALLAGA_3

97.4 %
39 shared markers

View View all Clone Any

PERICT

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP560
26	TcSNP534	27	TcSNP529	28	TcSNP469	29	TcSNP429	30	TcSNP372
31	TcSNP242	32	TcSNP230	33	TcSNP226	34	TcSNP193	35	TcSNP151
36	TcSNP150	37	TcSNP144	38	TcSNP32	39	TcSNP25