SNP Profiles of IMC 47   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCGGCGCCTTACCCTTCCCCAAGGCCAG
1._IMC_41___
CCGGCGCCTTACCCTTCCCCAAGGCCAG
2._IMC_41___
CCGGCGCCTTACCCTTCCCCAAGGCCAG
3._IMC_41___
CCGGCGCCTTACCCTTCCCCAAGGCCAG
4._IMC_41___
CCGGCGCCTTACCCTTCCCCAAGGCCAG
5._IMC_41___
CCGGCGCCTTACCCTTCCCCAAGGCCAG
6._IMC_41___
CCGGCGCCTTACCCTTCCCCAAGGCCAG
7._IMC_41___
CCGGCGCCTTACCCTTCCCCAAGGCCAG
8._IMC_41___
CCGGCGCCTTACCCTTCCCCAAGGCCAG
9._IMC_41___
CCGGCGCCTTACCCTTCCCCAAGGCCAG
10._IMC_41___
CCGGCGCCTT__CCTTCCCCAAGGCCAG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CTAAGGCTCCGGGGAATTACGGGTCCAA
1._IMC_41___
CTAAGGCTCCGGGGAATTACGGGTCCAA
2._IMC_41___
CTAAGGCTCCGGGGAATTACGGGTCCAA
3._IMC_41___
CTAAGGCTCCGGGGAATTACGGGTCCAA
4._IMC_41___
CTAAGGCTCCGGGGAATTACGGGTCCAA
5._IMC_41___
CTAAGGCTCCGGGGAATTACGGGTCCAA
6._IMC_41___
CTAAGGCTCCGGGGAATTACGGGTCCAA
7._IMC_41___
CTAAGGCTCCGGGGAATTACGGGTCCAA
8._IMC_41___
CTAAGGCTCCGGGGAATTACGGGTCCAA
9._IMC_41___
CTAAGGCTCCGGGGAATTACGGGTCCAA
10._IMC_41___
CTAAGGCTCCGGGGAATT__GGGTCCAA
 29 30 31 32 33 34 35 36 37 38 39    
_Input profile
AAGGAACCAACCCCGTACAAGGX_XX_XX_X
1._IMC_41___
AAGGAACCAACCCCGTACAAGGX_XX_XX_X
2._IMC_41___
AAGGAACCAACCCCGTACAAGGX_XX_XX_X
3._IMC_41___
AAGGAACCAACCCCGTACAAGGX_XX_XX_X
4._IMC_41___
AAGGAACCAACCCCGTACAAGGX_XX_XX_X
5._IMC_41___
AAGGAACCAACCCCGTACAAGGX_XX_XX_X
6._IMC_41___
AAGGAACCAACCCCGTACAAGGX_XX_XX_X
7._IMC_41___
AAGGAACCAACCCCGTACAAGGX_XX_XX_X
8._IMC_41___
AAGGAACCAACCCCGTACAAGGX_XX_XX_X
9._IMC_41___
AAGGAACCAACCCCGTACAAGGX_XX_XX_X
10._IMC_41___
AAGGAACCAA__CCGTACAAGGX_XX_XX_X

Input profile: IMC_41

 
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Mars Center for Cocoa Science, Brazil
Location: 8847 3
 Dapeng Zhang, 2016

1._IMC_41

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8847 5
 Dapeng Zhang, 2016

2._IMC_41

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8847 4
 Dapeng Zhang, 2016

3._IMC_41

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8847 2
 Dapeng Zhang, 2016

4._IMC_41

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8847 1
 Dapeng Zhang, 2016

5._IMC_41 GC-08-275-8-47

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

6._IMC_41 GC-08-275-8-47

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

7._IMC_41 GC-08-275-8-47

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

8._IMC_41 GC-08-275-8-47

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

9._IMC_41 GC-08-275-8-47

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

10._IMC_41

identical
36 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F418 T1
 Dapeng Zhang, 2016

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP151
36TcSNP150 37TcSNP144 38TcSNP32 39TcSNP25