SNP Profiles of MA 15 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AA	AG	CT	AA
1._GC-01-060-3-15	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AA	AG	CT	AA
2._GC-01-060-3-15	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AA	AG	CT	AA
3._GC-01-060-3-15	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AA	AG	CT	AA
4._MA_15_[BRA]	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AA	AG	CT	AA
5._MA_15_[BRA]	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AA	AG	CT	AA
6._GC-01-060-3-15	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AA	AG	CT	AA
7._MA_15_[BRA]	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AA	AG	CT	AA
8._GC-01-060-3-15	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
9._MA_15_[BRA]	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
10._GC-01-060-3-15	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	__	AG	CC	AA
11._MA_15_[BRA]	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	__	AG	CC	AA
12._GC-01-060-3-15	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
13._GC-01-060-3-15	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
14._GC-01-060-3-15	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
15._GC-01-060-3-15	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
16._MA_15_[BRA]	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
17._MA_15_[BRA]	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
18._MA_15_[BRA]	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
19._MA_15_[BRA]	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CT	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC
1._GC-01-060-3-15	CT	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC
2._GC-01-060-3-15	CT	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC
3._GC-01-060-3-15	CT	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC
4._MA_15_[BRA]	CT	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC
5._MA_15_[BRA]	CT	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC
6._GC-01-060-3-15	CT	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC
7._MA_15_[BRA]	CT	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC
8._GC-01-060-3-15	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	__
9._MA_15_[BRA]	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	__
10._GC-01-060-3-15	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
11._MA_15_[BRA]	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
12._GC-01-060-3-15	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
13._GC-01-060-3-15	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
14._GC-01-060-3-15	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
15._GC-01-060-3-15	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
16._MA_15_[BRA]	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
17._MA_15_[BRA]	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
18._MA_15_[BRA]	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
19._MA_15_[BRA]	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA

	29	30	31	32	33	34	35	36	37	38	39
_Input profile	AA	GG	AA	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X
1._GC-01-060-3-15	AA	GG	AA	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X
2._GC-01-060-3-15	AA	GG	AA	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X
3._GC-01-060-3-15	AA	GG	AA	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X
4._MA_15_[BRA]	AA	GG	AA	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X
5._MA_15_[BRA]	AA	GG	AA	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X
6._GC-01-060-3-15	AA	GG	AA	AG	CC	AA	__	TT	CC	TT	GG	X_X	X_X	X_X
7._MA_15_[BRA]	AA	GG	AA	AG	CC	AA	__	TT	CC	TT	GG	X_X	X_X	X_X
8._GC-01-060-3-15	AG	GG	AA	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
9._MA_15_[BRA]	AG	GG	AA	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
10._GC-01-060-3-15	AG	GG	AA	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
11._MA_15_[BRA]	AG	GG	AA	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
12._GC-01-060-3-15	AG	GG	AA	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
13._GC-01-060-3-15	AG	GG	AA	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
14._GC-01-060-3-15	AG	GG	AA	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
15._GC-01-060-3-15	AG	GG	AA	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
16._MA_15_[BRA]	AG	GG	AA	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
17._MA_15_[BRA]	AG	GG	AA	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
18._MA_15_[BRA]	AG	GG	AA	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
19._MA_15_[BRA]	AG	GG	AA	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X

Input profile: MA_15_[BRA]

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 5

Dapeng Zhang, 2016

1._MA_15_[BRA] GC-01-060-3-15

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

2._MA_15_[BRA] GC-01-060-3-15

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

3._MA_15_[BRA] GC-01-060-3-15

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

4._MA_15_[BRA]

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 2

Dapeng Zhang, 2016

5._MA_15_[BRA]

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 1 > FP

Dapeng Zhang, 2016

6._MA_15_[BRA] GC-01-060-3-15

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 13

Notes: 13

7._MA_15_[BRA]

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 13

Dapeng Zhang, 2016

8._MA_15_[BRA] GC-01-060-3-15

55.3 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7 > FP4

9._MA_15_[BRA]

55.3 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 7 > FP

Dapeng Zhang, 2016

10._MA_15_[BRA] GC-01-060-3-15

53.9 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 14

Notes: 14

11._MA_15_[BRA]

53.9 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 14

Dapeng Zhang, 2016

12._MA_15_[BRA] GC-01-060-3-15

53.8 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 15

Notes: 15 > FP3

13._MA_15_[BRA] GC-01-060-3-15

53.8 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12 > FP2

14._MA_15_[BRA] GC-01-060-3-15

53.8 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8

15._MA_15_[BRA] GC-01-060-3-15

53.8 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

16._MA_15_[BRA]

53.8 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 12 > F

Dapeng Zhang, 2016

17._MA_15_[BRA]

53.8 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 15 > F

Dapeng Zhang, 2016

18._MA_15_[BRA]

53.8 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 4

Dapeng Zhang, 2016

19._MA_15_[BRA]

53.8 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 8

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP230	33	TcSNP226	34	TcSNP193	35	TcSNP151
36	TcSNP150	37	TcSNP144	38	TcSNP32	39	TcSNP25