SNP Profiles of MA-12 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
1._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
2._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
3._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
4._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
5._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
6._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
7._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
8._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	__	AG	CC	AA
9._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
10._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	__	AG	CC	AA
11._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AT	AG	CC	AA
12._MA_15_[BRA]___	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AA	AG	CT	AA
13._MA_15_[BRA]___	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AA	AG	CT	AA
14._MA_15_[BRA]___	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AA	AG	CT	AA
15._MA_15_[BRA]___	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AA	AG	CT	AA
16._MA_15_[BRA]___	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AA	AG	CT	AA
17._MA_15_[BRA]___	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AA	AG	CT	AA
18._MA_15_[BRA]___	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AA	AG	CT	AA
19._MA_15_[BRA]___	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AA	AG	CT	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
1._MA_15_[BRA]___	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
2._MA_15_[BRA]___	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
3._MA_15_[BRA]___	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
4._MA_15_[BRA]___	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
5._MA_15_[BRA]___	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
6._MA_15_[BRA]___	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
7._MA_15_[BRA]___	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
8._MA_15_[BRA]___	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
9._MA_15_[BRA]___	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	__
10._MA_15_[BRA]___	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA
11._MA_15_[BRA]___	CT	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	__
12._MA_15_[BRA]___	CT	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC
13._MA_15_[BRA]___	CT	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC
14._MA_15_[BRA]___	CT	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC
15._MA_15_[BRA]___	CT	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC
16._MA_15_[BRA]___	CT	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC
17._MA_15_[BRA]___	CT	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC
18._MA_15_[BRA]___	CT	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC
19._MA_15_[BRA]___	CT	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	AG	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X
1._MA_15_[BRA]___	AG	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X
2._MA_15_[BRA]___	AG	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X
3._MA_15_[BRA]___	AG	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X
4._MA_15_[BRA]___	AG	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X
5._MA_15_[BRA]___	AG	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X
6._MA_15_[BRA]___	AG	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X
7._MA_15_[BRA]___	AG	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X
8._MA_15_[BRA]___	AG	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X
9._MA_15_[BRA]___	AG	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X
10._MA_15_[BRA]___	AG	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X
11._MA_15_[BRA]___	AG	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X
12._MA_15_[BRA]___	AA	GG	AA	__	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X
13._MA_15_[BRA]___	AA	GG	AA	__	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X
14._MA_15_[BRA]___	AA	GG	AA	TT	AG	CC	AA	__	TT	CC	TT	GG	X_X	X_X
15._MA_15_[BRA]___	AA	GG	AA	TT	AG	CC	AA	__	TT	CC	TT	GG	X_X	X_X
16._MA_15_[BRA]___	AA	GG	AA	TT	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X
17._MA_15_[BRA]___	AA	GG	AA	TT	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X
18._MA_15_[BRA]___	AA	GG	AA	TT	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X
19._MA_15_[BRA]___	AA	GG	AA	TT	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X

Input profile: MA_15_[BRA]

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Mars Center for Cocoa Science, Brazil

Location: 1315 12 > F

Dapeng Zhang, 2016

1._MA_15_[BRA] GC-01-060-3-15

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 15

Notes: 15 > FP3

2._MA_15_[BRA] GC-01-060-3-15

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12 > FP2

3._MA_15_[BRA] GC-01-060-3-15

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8

4._MA_15_[BRA] GC-01-060-3-15

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

5._MA_15_[BRA]

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 15 > F

Dapeng Zhang, 2016

6._MA_15_[BRA]

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 4

Dapeng Zhang, 2016

7._MA_15_[BRA]

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 8

Dapeng Zhang, 2016

8._MA_15_[BRA] GC-01-060-3-15

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 14

Notes: 14

9._MA_15_[BRA] GC-01-060-3-15

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7 > FP4

10._MA_15_[BRA]

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 14

Dapeng Zhang, 2016

11._MA_15_[BRA]

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 7 > FP

Dapeng Zhang, 2016

12._MA_15_[BRA] GC-01-060-3-15

53.8 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

13._MA_15_[BRA]

53.8 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 5

Dapeng Zhang, 2016

14._MA_15_[BRA] GC-01-060-3-15

52.6 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 13

Notes: 13

15._MA_15_[BRA]

52.6 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 13

Dapeng Zhang, 2016

16._MA_15_[BRA] GC-01-060-3-15

52.5 %
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

17._MA_15_[BRA] GC-01-060-3-15

52.5 %
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

18._MA_15_[BRA]

52.5 %
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 2

Dapeng Zhang, 2016

19._MA_15_[BRA]

52.5 %
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 1 > FP

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25