SNP Profiles of MA-12 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AG	CC	AA	CT
1._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AG	CC	AA	CT
2._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AG	CC	AA	CT
3._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AG	CC	AA	CT
4._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AG	CC	AA	CT
5._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AG	CC	AA	CT
6._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AG	CC	AA	CT
7._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AG	CC	AA	CT
8._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AG	CC	AA	CT
9._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AG	CC	AA	CT
10._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AG	CC	AA	CT
11._MA_15_[BRA]___	CT	AG	GG	TT	CC	CC	CT	GT	CT	CT	AG	CC	AA	CT
12._MA_15_[BRA]___	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AG	CT	AA	CT
13._MA_15_[BRA]___	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AG	CT	AA	CT
14._MA_15_[BRA]___	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AG	CT	AA	CT
15._MA_15_[BRA]___	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AG	CT	AA	CT
16._MA_15_[BRA]___	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AG	CT	AA	CT
17._MA_15_[BRA]___	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AG	CT	AA	CT
18._MA_15_[BRA]___	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AG	CT	AA	CT
19._MA_15_[BRA]___	CC	AA	GG	CC	TT	AA	TT	TT	CC	TT	AG	CT	AA	CT

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA	AG
1._MA_15_[BRA]___	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA	AG
2._MA_15_[BRA]___	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA	AG
3._MA_15_[BRA]___	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA	AG
4._MA_15_[BRA]___	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA	AG
5._MA_15_[BRA]___	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA	AG
6._MA_15_[BRA]___	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA	AG
7._MA_15_[BRA]___	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA	AG
8._MA_15_[BRA]___	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA	AG
9._MA_15_[BRA]___	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	AA	AG
10._MA_15_[BRA]___	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	__	AG
11._MA_15_[BRA]___	AT	CC	CC	CT	CG	GG	AA	TT	CC	CC	GG	CC	__	AG
12._MA_15_[BRA]___	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC	AA
13._MA_15_[BRA]___	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC	AA
14._MA_15_[BRA]___	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC	AA
15._MA_15_[BRA]___	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC	AA
16._MA_15_[BRA]___	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC	AA
17._MA_15_[BRA]___	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC	AA
18._MA_15_[BRA]___	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC	AA
19._MA_15_[BRA]___	AA	GG	CC	CC	CG	GG	AA	CC	AA	CG	TT	CT	CC	AA

	29	30	31	32	33	34	35	36	37	38	39
_Input profile	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
1._MA_15_[BRA]___	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
2._MA_15_[BRA]___	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
3._MA_15_[BRA]___	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
4._MA_15_[BRA]___	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
5._MA_15_[BRA]___	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
6._MA_15_[BRA]___	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
7._MA_15_[BRA]___	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
8._MA_15_[BRA]___	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
9._MA_15_[BRA]___	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
10._MA_15_[BRA]___	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
11._MA_15_[BRA]___	GG	AA	CC	AG	CC	CC	CT	GT	AC	AT	CG	X_X	X_X	X_X
12._MA_15_[BRA]___	GG	AA	__	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X
13._MA_15_[BRA]___	GG	AA	__	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X
14._MA_15_[BRA]___	GG	AA	TT	AG	CC	AA	__	TT	CC	TT	GG	X_X	X_X	X_X
15._MA_15_[BRA]___	GG	AA	TT	AG	CC	AA	__	TT	CC	TT	GG	X_X	X_X	X_X
16._MA_15_[BRA]___	GG	AA	TT	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X
17._MA_15_[BRA]___	GG	AA	TT	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X
18._MA_15_[BRA]___	GG	AA	TT	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X
19._MA_15_[BRA]___	GG	AA	TT	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X	X_X

Input profile: MA_15_[BRA]

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 14

Dapeng Zhang, 2016

1._MA_15_[BRA] GC-01-060-3-15

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 15

Notes: 15 > FP3

2._MA_15_[BRA] GC-01-060-3-15

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 14

Notes: 14

3._MA_15_[BRA] GC-01-060-3-15

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12 > FP2

4._MA_15_[BRA] GC-01-060-3-15

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8

5._MA_15_[BRA] GC-01-060-3-15

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

6._MA_15_[BRA]

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 8

Dapeng Zhang, 2016

7._MA_15_[BRA]

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 12 > F

Dapeng Zhang, 2016

8._MA_15_[BRA]

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 15 > F

Dapeng Zhang, 2016

9._MA_15_[BRA]

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 4

Dapeng Zhang, 2016

10._MA_15_[BRA] GC-01-060-3-15

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7 > FP4

11._MA_15_[BRA]

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 7 > FP

Dapeng Zhang, 2016

12._MA_15_[BRA] GC-01-060-3-15

53.9 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

13._MA_15_[BRA]

53.9 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 5

Dapeng Zhang, 2016

14._MA_15_[BRA] GC-01-060-3-15

52.6 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 13

Notes: 13

15._MA_15_[BRA]

52.6 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 13

Dapeng Zhang, 2016

16._MA_15_[BRA] GC-01-060-3-15

52.6 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

17._MA_15_[BRA] GC-01-060-3-15

52.6 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

18._MA_15_[BRA]

52.6 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 2

Dapeng Zhang, 2016

19._MA_15_[BRA]

52.6 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1315 1 > FP

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1062	12	TcSNP1060	13	TcSNP998	14	TcSNP994	15	TcSNP953
16	TcSNP929	17	TcSNP917	18	TcSNP891	19	TcSNP872	20	TcSNP723
21	TcSNP645	22	TcSNP619	23	TcSNP591	24	TcSNP577	25	TcSNP560
26	TcSNP534	27	TcSNP529	28	TcSNP469	29	TcSNP429	30	TcSNP372
31	TcSNP242	32	TcSNP230	33	TcSNP226	34	TcSNP193	35	TcSNP151
36	TcSNP150	37	TcSNP144	38	TcSNP32	39	TcSNP25