SNP Profiles of POUND 10 /B   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCAGGGTTTTCCTTTTCCCCAAGGCCGG
1._POUND_10_/B
CCAAGGTTTTCCTTTTCCCCAAGGCCGG
2._GC-01-115-6-12
CCAAGGTTTT__TTTTCCCCAAGGCCGG
3._GC-01-115-6-12
CCAAGGTTTT__TTTTCCCCAAGGCCGG
4._GC-01-115-6-12
CCAAGGTTTT__TTTTCCCCAAGGCCGG
5._GC-08-162-4-05
CCAAGGTTTT__TTTTCCCCAAGGCCGG
6._GC-08-163-4-06
CCAAGGTTTT__TTTTCCCCAAGGCCGG
7._GC-08-163-4-06
CCAAGGTTTT__TTTTCCCCAAGGCCGG
8._POUND_10_/B
CCAAGGTTTT__TTTTCCCCAAGGCCGG
9._POUND_10_/B
CCAAGGTTTT__TTTTCCCCAAGGCCGG
10._POUND_10_/B
CCAAGGTTTT__TTTTCCCCAAGGCCGG
11._POUND_10_/B
CCAAGGTTTT__TTTTCCCCAAGGCCGG
12._POUND_10_/B
CCAAGGTTTT__TTTTCCCCAAGGCCGG
13._POUND_10_/B
CCAAGGTTTT__TTTTCCCCAAGGCCGG
14._GC-01-115-6-12
CCAAGGTT____TTTTCCCCAAGGCCGG
15._POUND_10_/B
CCAAGGTT____TTTTCCCCAAGGCCGG
16._RUQ_1618
__AAGGTT______TT________CCGG
17._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
18._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
19._GC-01-115-6-12
CCAGCCTTCTAATTGTCTCCAAGGCCAA
20._GC-01-115-6-12
CCAGCCTTCTAATTGTCTCCAAGGCCAA
21._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
22._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
23._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
24._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
25._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
26._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
27._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
28._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
29._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
30._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
31._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
32._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
33._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
34._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
35._POUND_10_/B
CTAGGGCTCTAACCTTCCCTAAAACCAG
36._GC-08-163-4-06
CTAGGGCTCTAACCTTCCCTAAAACCAG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTAAGGTTTTCGGGAACCAAGGTTCCCC
1._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
2._GC-01-115-6-12
TTAAGGTTTTCGGGAACCAAGGTTCCCC
3._GC-01-115-6-12
TTAAGGTTTTCGGGAACCAAGGTTCCCC
4._GC-01-115-6-12
TTAAGGTTTTCGGGAACCAAGGTTCCCC
5._GC-08-162-4-05
TTAAGGTTTTCGGGAACCAAGGTTCCCC
6._GC-08-163-4-06
TTAAGGTTTTCGGGAACCAAGGTTCCCC
7._GC-08-163-4-06
TTAAGGTTTTCGGGAACCAAGGTTCCCC
8._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
9._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
10._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
11._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
12._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
13._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
14._GC-01-115-6-12
TTAAGGTTTTCGGGAACCAAGGTTCCCC
15._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
16._RUQ_1618
________TTCGGG__CCAAGGTTCCCC
17._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
18._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
19._GC-01-115-6-12
TTAACGCTCTCGGGAACTACGGGGCTAC
20._GC-01-115-6-12
TTAACGCTCTCGGGAACTACGGGGCTAC
21._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
22._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
23._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
24._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
25._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
26._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
27._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
28._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
29._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
30._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
31._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
32._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
33._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
34._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
35._POUND_10_/B
CTATCGCTCCCGGGAGTTAACGGTCTCC
36._GC-08-163-4-06
CTATCGCTCCCGGGAGTTAACGGTCTCC
 29 30 31 32 33 34 35 36 37 38 39 40   
_Input profile
AAGGAACCGGCCAACCGGAATTGGX_XX_X
1._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
2._GC-01-115-6-12
AAGGAACCGGCCAACCGGAATTGGX_XX_X
3._GC-01-115-6-12
AAGGAACCGGCCAACCGGAATTGGX_XX_X
4._GC-01-115-6-12
AAGGAACCGGCCAACCGGAATTGGX_XX_X
5._GC-08-162-4-05
AAGGAACCGGCCAACCGGAATTGGX_XX_X
6._GC-08-163-4-06
AAGGAACCGGCCAACCGGAATTGGX_XX_X
7._GC-08-163-4-06
AAGGAACCGGCCAACCGGAATTGGX_XX_X
8._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
9._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
10._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
11._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
12._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
13._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
14._GC-01-115-6-12
AAGGAACCGGCCAACCGGAATTGGX_XX_X
15._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
16._RUQ_1618
AA__AACCGGCCAACCGGAA____X_XX_X
17._GC-08-162-4-05
AGGGAACTAGCCCCCTGTACATGGX_XX_X
18._POUND_10_/B
AGGGAACTAGCCCCCTGTACATGGX_XX_X
19._GC-01-115-6-12
AGGGAACTAGCCCCCTGTACATGGX_XX_X
20._GC-01-115-6-12
AGGGAACTAGCCCCCTGTACATGGX_XX_X
21._GC-08-162-4-05
AGGGAACTAGCCCCCTGTACATGGX_XX_X
22._POUND_10_/B
AGGGAACTAGCCCCCTGTACATGGX_XX_X
23._GC-08-162-4-05
AGGGAACTAGCCCCCTGTACATGGX_XX_X
24._GC-08-162-4-05
AGGGAACTAGCCCCCTGTACATGGX_XX_X
25._GC-08-162-4-05
AGGGAACTAGCCCCCTGTACATGGX_XX_X
26._GC-08-162-4-05
AGGGAACTAGCCCCCTGTACATGGX_XX_X
27._POUND_10_/B
AGGGAACTAGCCCCCTGTACATGGX_XX_X
28._POUND_10_/B
AGGGAACTAGCCCCCTGTACATGGX_XX_X
29._POUND_10_/B
AGGGAACTAGCCCCCTGTACATGGX_XX_X
30._POUND_10_/B
AGGGAACTAGCCCCCTGTACATGGX_XX_X
31._POUND_10_/B
AGGGAACTAGCCCCCTGTACATGGX_XX_X
32._POUND_10_/B
AGGGAACTAGCCCCCTGTACATGGX_XX_X
33._POUND_10_/B
AGGG__CTAGCCCCCTGTACATGGX_XX_X
34._GC-08-162-4-05
AGGG__CTAGCCCCCTGTACATGGX_XX_X
35._POUND_10_/B
AAGGAACCAACCACCTGTCCATCGX_XX_X
36._GC-08-163-4-06
AAGGAACCAACCACCTGTCCATCGX_XX_X

Input profile: POUND_10_/B RUQ_1618

 
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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

1._POUND_10_/B

98.8 %
40 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F429 T13
 Dapeng Zhang, 2016

2._POUND_10_/B GC-01-115-6-12

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

3._POUND_10_/B GC-01-115-6-12

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018

4._POUND_10_/B GC-01-115-6-12

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP3
 Mars, 2018

5._POUND_10_/B GC-08-162-4-05

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

6._POUND_10_/B GC-08-163-4-06

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

7._POUND_10_/B GC-08-163-4-06

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

8._POUND_10_/B

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 1 > FP
 Dapeng Zhang, 2016

9._POUND_10_/B

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 11 > F
 Dapeng Zhang, 2016

10._POUND_10_/B

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 3 > FP
 Dapeng Zhang, 2016

11._POUND_10_/B

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 7
 Dapeng Zhang, 2016

12._POUND_10_/B

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8406 2
 Dapeng Zhang, 2016

13._POUND_10_/B

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8406 10
 Dapeng Zhang, 2016

14._POUND_10_/B GC-01-115-6-12

98.7 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

15._POUND_10_/B

98.7 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 9
 Dapeng Zhang, 2016

16._POUND_10_/B RUQ_1618

97.9 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

17._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

18._POUND_10_/B

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 10
 Dapeng Zhang, 2016

19._POUND_10_/B GC-01-115-6-12

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP1
 Mars, 2018

20._POUND_10_/B GC-01-115-6-12

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

21._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

22._POUND_10_/B

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 8
 Dapeng Zhang, 2016

23._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

24._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

25._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

26._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

27._POUND_10_/B

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 6
 Dapeng Zhang, 2016

28._POUND_10_/B

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 10
 Dapeng Zhang, 2016

29._POUND_10_/B

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 2 > FP
 Dapeng Zhang, 2016

30._POUND_10_/B

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 2
 Dapeng Zhang, 2016

31._POUND_10_/B

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 4
 Dapeng Zhang, 2016

32._POUND_10_/B

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 5
 Dapeng Zhang, 2016

33._POUND_10_/B

65.4 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 11
 Dapeng Zhang, 2016

34._POUND_10_/B GC-08-162-4-05

65.4 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

35._POUND_10_/B

60 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8406 7
 Dapeng Zhang, 2016

36._POUND_10_/B GC-08-163-4-06

60 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25