SNP Profiles of POUND 10B   View Data

 Show/Hide Profiles

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCAGGGTTTTCCTTTTCCCCAAGGCCGG
1._POUND_10_/B___
CCAAGGTTTTCCTTTTCCCCAAGGCCGG
2._POUND_10_/B___
CCAAGGTTTT__TTTTCCCCAAGGCCGG
3._POUND_10_/B___
CCAAGGTTTT__TTTTCCCCAAGGCCGG
4._POUND_10_/B___
CCAAGGTTTT__TTTTCCCCAAGGCCGG
5._POUND_10_/B___
CCAAGGTTTT__TTTTCCCCAAGGCCGG
6._POUND_10_/B___
CCAAGGTTTT__TTTTCCCCAAGGCCGG
7._POUND_10_/B___
CCAAGGTTTT__TTTTCCCCAAGGCCGG
8._POUND_10_/B___
CCAAGGTTTT__TTTTCCCCAAGGCCGG
9._POUND_10_/B___
CCAAGGTTTT__TTTTCCCCAAGGCCGG
10._POUND_10_/B___
CCAAGGTTTT__TTTTCCCCAAGGCCGG
11._POUND_10_/B___
CCAAGGTTTT__TTTTCCCCAAGGCCGG
12._POUND_10_/B___
CCAAGGTTTT__TTTTCCCCAAGGCCGG
13._POUND_10_/B___
CCAAGGTTTT__TTTTCCCCAAGGCCGG
14._POUND_10_/B___
CCAAGGTT____TTTTCCCCAAGGCCGG
15._POUND_10_/B___
CCAAGGTT____TTTTCCCCAAGGCCGG
16._POUND_10_/B___
__AAGGTT______TT________CCGG
17._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
18._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
19._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
20._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
21._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
22._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
23._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
24._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
25._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
26._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
27._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
28._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
29._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
30._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
31._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
32._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
33._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
34._POUND_10_/B___
CCAGCCTTCTAATTGTCTCCAAGGCCAA
35._POUND_10_/B___
CTAGGGCTCTAACCTTCCCTAAAACCAG
36._POUND_10_/B___
CTAGGGCTCTAACCTTCCCTAAAACCAG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTAAGGTTTTCGGGAACCAAGGTTCCCC
1._POUND_10_/B___
TTAAGGTTTTCGGGAACCAAGGTTCCCC
2._POUND_10_/B___
TTAAGGTTTTCGGGAACCAAGGTTCCCC
3._POUND_10_/B___
TTAAGGTTTTCGGGAACCAAGGTTCCCC
4._POUND_10_/B___
TTAAGGTTTTCGGGAACCAAGGTTCCCC
5._POUND_10_/B___
TTAAGGTTTTCGGGAACCAAGGTTCCCC
6._POUND_10_/B___
TTAAGGTTTTCGGGAACCAAGGTTCCCC
7._POUND_10_/B___
TTAAGGTTTTCGGGAACCAAGGTTCCCC
8._POUND_10_/B___
TTAAGGTTTTCGGGAACCAAGGTTCCCC
9._POUND_10_/B___
TTAAGGTTTTCGGGAACCAAGGTTCCCC
10._POUND_10_/B___
TTAAGGTTTTCGGGAACCAAGGTTCCCC
11._POUND_10_/B___
TTAAGGTTTTCGGGAACCAAGGTTCCCC
12._POUND_10_/B___
TTAAGGTTTTCGGGAACCAAGGTTCCCC
13._POUND_10_/B___
TTAAGGTTTTCGGGAACCAAGGTTCCCC
14._POUND_10_/B___
TTAAGGTTTTCGGGAACCAAGGTTCCCC
15._POUND_10_/B___
TTAAGGTTTTCGGGAACCAAGGTTCCCC
16._POUND_10_/B___
________TTCGGG__CCAAGGTTCCCC
17._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
18._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
19._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
20._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
21._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
22._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
23._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
24._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
25._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
26._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
27._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
28._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
29._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
30._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
31._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
32._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
33._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
34._POUND_10_/B___
TTAACGCTCTCGGGAACTACGGGGCTAC
35._POUND_10_/B___
CTATCGCTCCCGGGAGTTAACGGTCTCC
36._POUND_10_/B___
CTATCGCTCCCGGGAGTTAACGGTCTCC
 29 30 31 32 33 34 35 36 37 38 39 40   
_Input profile
AAGGAACCGGCCAACCGGAATTGGX_XX_X
1._POUND_10_/B___
AAGGAACCGGCCAACCGGAATTGGX_XX_X
2._POUND_10_/B___
AAGGAACCGGCCAACCGGAATTGGX_XX_X
3._POUND_10_/B___
AAGGAACCGGCCAACCGGAATTGGX_XX_X
4._POUND_10_/B___
AAGGAACCGGCCAACCGGAATTGGX_XX_X
5._POUND_10_/B___
AAGGAACCGGCCAACCGGAATTGGX_XX_X
6._POUND_10_/B___
AAGGAACCGGCCAACCGGAATTGGX_XX_X
7._POUND_10_/B___
AAGGAACCGGCCAACCGGAATTGGX_XX_X
8._POUND_10_/B___
AAGGAACCGGCCAACCGGAATTGGX_XX_X
9._POUND_10_/B___
AAGGAACCGGCCAACCGGAATTGGX_XX_X
10._POUND_10_/B___
AAGGAACCGGCCAACCGGAATTGGX_XX_X
11._POUND_10_/B___
AAGGAACCGGCCAACCGGAATTGGX_XX_X
12._POUND_10_/B___
AAGGAACCGGCCAACCGGAATTGGX_XX_X
13._POUND_10_/B___
AAGGAACCGGCCAACCGGAATTGGX_XX_X
14._POUND_10_/B___
AAGGAACCGGCCAACCGGAATTGGX_XX_X
15._POUND_10_/B___
AAGGAACCGGCCAACCGGAATTGGX_XX_X
16._POUND_10_/B___
AA__AACCGGCCAACCGGAA____X_XX_X
17._POUND_10_/B___
AGGGAACTAGCCCCCTGTACATGGX_XX_X
18._POUND_10_/B___
AGGGAACTAGCCCCCTGTACATGGX_XX_X
19._POUND_10_/B___
AGGGAACTAGCCCCCTGTACATGGX_XX_X
20._POUND_10_/B___
AGGGAACTAGCCCCCTGTACATGGX_XX_X
21._POUND_10_/B___
AGGGAACTAGCCCCCTGTACATGGX_XX_X
22._POUND_10_/B___
AGGGAACTAGCCCCCTGTACATGGX_XX_X
23._POUND_10_/B___
AGGGAACTAGCCCCCTGTACATGGX_XX_X
24._POUND_10_/B___
AGGGAACTAGCCCCCTGTACATGGX_XX_X
25._POUND_10_/B___
AGGGAACTAGCCCCCTGTACATGGX_XX_X
26._POUND_10_/B___
AGGGAACTAGCCCCCTGTACATGGX_XX_X
27._POUND_10_/B___
AGGGAACTAGCCCCCTGTACATGGX_XX_X
28._POUND_10_/B___
AGGGAACTAGCCCCCTGTACATGGX_XX_X
29._POUND_10_/B___
AGGGAACTAGCCCCCTGTACATGGX_XX_X
30._POUND_10_/B___
AGGGAACTAGCCCCCTGTACATGGX_XX_X
31._POUND_10_/B___
AGGGAACTAGCCCCCTGTACATGGX_XX_X
32._POUND_10_/B___
AGGGAACTAGCCCCCTGTACATGGX_XX_X
33._POUND_10_/B___
AGGG__CTAGCCCCCTGTACATGGX_XX_X
34._POUND_10_/B___
AGGG__CTAGCCCCCTGTACATGGX_XX_X
35._POUND_10_/B___
AAGGAACCAACCACCTGTCCATCGX_XX_X
36._POUND_10_/B___
AAGGAACCAACCACCTGTCCATCGX_XX_X

Input profile: POUND_10_/B RUQ_1618

 
 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

1._POUND_10_/B

98.8 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F429 T13
 Dapeng Zhang, 2016

2._POUND_10_/B GC-01-115-6-12

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

3._POUND_10_/B GC-01-115-6-12

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018

4._POUND_10_/B GC-01-115-6-12

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP3
 Mars, 2018

5._POUND_10_/B GC-08-162-4-05

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

6._POUND_10_/B GC-08-163-4-06

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

7._POUND_10_/B GC-08-163-4-06

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

8._POUND_10_/B

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1612 1 > FP
 Dapeng Zhang, 2016

9._POUND_10_/B

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1612 11 > F
 Dapeng Zhang, 2016

10._POUND_10_/B

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1612 3 > FP
 Dapeng Zhang, 2016

11._POUND_10_/B

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8405 7
 Dapeng Zhang, 2016

12._POUND_10_/B

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8406 2
 Dapeng Zhang, 2016

13._POUND_10_/B

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8406 10
 Dapeng Zhang, 2016

14._POUND_10_/B GC-01-115-6-12

98.7 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

15._POUND_10_/B

98.7 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1612 9
 Dapeng Zhang, 2016

16._POUND_10_/B RUQ_1618

97.9 %
24 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

17._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

18._POUND_10_/B

66.3 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8405 10
 Dapeng Zhang, 2016

19._POUND_10_/B GC-01-115-6-12

66.3 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP1
 Mars, 2018

20._POUND_10_/B GC-01-115-6-12

66.3 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

21._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

22._POUND_10_/B

66.3 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8405 8
 Dapeng Zhang, 2016

23._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

24._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

25._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

26._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

27._POUND_10_/B

66.3 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8405 6
 Dapeng Zhang, 2016

28._POUND_10_/B

66.3 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1612 10
 Dapeng Zhang, 2016

29._POUND_10_/B

66.3 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1612 2 > FP
 Dapeng Zhang, 2016

30._POUND_10_/B

66.3 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8405 2
 Dapeng Zhang, 2016

31._POUND_10_/B

66.3 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8405 4
 Dapeng Zhang, 2016

32._POUND_10_/B

66.3 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8405 5
 Dapeng Zhang, 2016

33._POUND_10_/B

65.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8405 11
 Dapeng Zhang, 2016

34._POUND_10_/B GC-08-162-4-05

65.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

35._POUND_10_/B

60 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8406 7
 Dapeng Zhang, 2016

36._POUND_10_/B GC-08-163-4-06

60 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25