SNP Profiles of POUND 10 /B   View Data

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_Input profile
CTAGGGCTCTAACCTTCCCTAAAACCAG
1._GC-08-163-4-06
CTAGGGCTCTAACCTTCCCTAAAACCAG
2._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
3._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
4._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
5._GC-01-115-6-12
CCAGCCTTCTAATTGTCTCCAAGGCCAA
6._GC-01-115-6-12
CCAGCCTTCTAATTGTCTCCAAGGCCAA
7._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
8._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
9._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
10._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
11._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
12._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
13._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
14._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
15._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
16._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
17._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
18._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
19._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
20._RUQ_1618
_AAGGTT___TT____CCGG
21._GC-01-115-6-12
CCAAGGTT__TTTTCCCCAAGGCCGG
22._POUND_10_/B
CCAAGGTT__TTTTCCCCAAGGCCGG
23._GC-01-115-6-12
CCAAGGTTTT_TTTTCCCCAAGGCCGG
24._GC-01-115-6-12
CCAAGGTTTT_TTTTCCCCAAGGCCGG
25._GC-01-115-6-12
CCAAGGTTTT_TTTTCCCCAAGGCCGG
26._GC-08-162-4-05
CCAAGGTTTT_TTTTCCCCAAGGCCGG
27._GC-08-163-4-06
CCAAGGTTTT_TTTTCCCCAAGGCCGG
28._GC-08-163-4-06
CCAAGGTTTT_TTTTCCCCAAGGCCGG
29._POUND_10_/B
CCAAGGTTTT_TTTTCCCCAAGGCCGG
30._POUND_10_/B
CCAAGGTTTT_TTTTCCCCAAGGCCGG
31._POUND_10_/B
CCAAGGTTTT_TTTTCCCCAAGGCCGG
32._POUND_10_/B
CCAAGGTTTT_TTTTCCCCAAGGCCGG
33._POUND_10_/B
CCAAGGTTTT_TTTTCCCCAAGGCCGG
34._POUND_10_/B
CCAAGGTTTT_TTTTCCCCAAGGCCGG
35._RUQ_1618
CCAGGGTTTTCCTTTTCCCCAAGGCCGG
36._POUND_10_/B
CCAAGGTTTTCCTTTTCCCCAAGGCCGG
 1516171819202122232425262728
_Input profile
CTATCGCTCCCGGGAGTTAACGGTCTCC
1._GC-08-163-4-06
CTATCGCTCCCGGGAGTTAACGGTCTCC
2._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
3._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
4._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
5._GC-01-115-6-12
TTAACGCTCTCGGGAACTACGGGGCTAC
6._GC-01-115-6-12
TTAACGCTCTCGGGAACTACGGGGCTAC
7._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
8._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
9._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
10._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
11._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
12._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
13._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
14._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
15._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
16._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
17._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
18._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
19._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
20._RUQ_1618
____TTCGGG_CCAAGGTTCCCC
21._GC-01-115-6-12
TTAAGGTTTTCGGGAACCAAGGTTCCCC
22._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
23._GC-01-115-6-12
TTAAGGTTTTCGGGAACCAAGGTTCCCC
24._GC-01-115-6-12
TTAAGGTTTTCGGGAACCAAGGTTCCCC
25._GC-01-115-6-12
TTAAGGTTTTCGGGAACCAAGGTTCCCC
26._GC-08-162-4-05
TTAAGGTTTTCGGGAACCAAGGTTCCCC
27._GC-08-163-4-06
TTAAGGTTTTCGGGAACCAAGGTTCCCC
28._GC-08-163-4-06
TTAAGGTTTTCGGGAACCAAGGTTCCCC
29._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
30._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
31._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
32._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
33._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
34._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
35._RUQ_1618
TTAAGGTTTTCGGGAACCAAGGTTCCCC
36._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
 293031323334353637383940  
_Input profile
AAGGAACCAACCACCTGTCCATCGX_XX_X
1._GC-08-163-4-06
AAGGAACCAACCACCTGTCCATCGX_XX_X
2._GC-08-162-4-05
AGGGAACTAGCCCCCTGTACATGGX_XX_X
3._POUND_10_/B
AGGGAACTAGCCCCCTGTACATGGX_XX_X
4._POUND_10_/B
AGGGAACTAGCCCCCTGTACATGGX_XX_X
5._GC-01-115-6-12
AGGGAACTAGCCCCCTGTACATGGX_XX_X
6._GC-01-115-6-12
AGGGAACTAGCCCCCTGTACATGGX_XX_X
7._GC-08-162-4-05
AGGGAACTAGCCCCCTGTACATGGX_XX_X
8._POUND_10_/B
AGGGAACTAGCCCCCTGTACATGGX_XX_X
9._GC-08-162-4-05
AGGGAACTAGCCCCCTGTACATGGX_XX_X
10._GC-08-162-4-05
AGGGAACTAGCCCCCTGTACATGGX_XX_X
11._GC-08-162-4-05
AGGGAACTAGCCCCCTGTACATGGX_XX_X
12._GC-08-162-4-05
AGGGAACTAGCCCCCTGTACATGGX_XX_X
13._POUND_10_/B
AGGGAACTAGCCCCCTGTACATGGX_XX_X
14._POUND_10_/B
AGGGAACTAGCCCCCTGTACATGGX_XX_X
15._POUND_10_/B
AGGGAACTAGCCCCCTGTACATGGX_XX_X
16._POUND_10_/B
AGGGAACTAGCCCCCTGTACATGGX_XX_X
17._POUND_10_/B
AGGGAACTAGCCCCCTGTACATGGX_XX_X
18._POUND_10_/B
AGGG_CTAGCCCCCTGTACATGGX_XX_X
19._GC-08-162-4-05
AGGG_CTAGCCCCCTGTACATGGX_XX_X
20._RUQ_1618
AA_AACCGGCCAACCGGAA__X_XX_X
21._GC-01-115-6-12
AAGGAACCGGCCAACCGGAATTGGX_XX_X
22._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
23._GC-01-115-6-12
AAGGAACCGGCCAACCGGAATTGGX_XX_X
24._GC-01-115-6-12
AAGGAACCGGCCAACCGGAATTGGX_XX_X
25._GC-01-115-6-12
AAGGAACCGGCCAACCGGAATTGGX_XX_X
26._GC-08-162-4-05
AAGGAACCGGCCAACCGGAATTGGX_XX_X
27._GC-08-163-4-06
AAGGAACCGGCCAACCGGAATTGGX_XX_X
28._GC-08-163-4-06
AAGGAACCGGCCAACCGGAATTGGX_XX_X
29._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
30._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
31._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
32._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
33._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
34._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X
35._RUQ_1618
AAGGAACCGGCCAACCGGAATTGGX_XX_X
36._POUND_10_/B
AAGGAACCGGCCAACCGGAATTGGX_XX_X

Input profile: POUND_10_/B

 
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Mars Center for Cocoa Science, Brazil
Location: 8406 7
 Dapeng Zhang, 2016

1._POUND_10_/B GC-08-163-4-06

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

2._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

3._POUND_10_/B

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 8
 Dapeng Zhang, 2016

4._POUND_10_/B

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 10
 Dapeng Zhang, 2016

5._POUND_10_/B GC-01-115-6-12

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP1
 Mars, 2018

6._POUND_10_/B GC-01-115-6-12

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

7._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

8._POUND_10_/B

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 6
 Dapeng Zhang, 2016

9._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

10._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

11._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

12._POUND_10_/B GC-08-162-4-05

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

13._POUND_10_/B

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 5
 Dapeng Zhang, 2016

14._POUND_10_/B

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 10
 Dapeng Zhang, 2016

15._POUND_10_/B

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 2 > FP
 Dapeng Zhang, 2016

16._POUND_10_/B

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 2
 Dapeng Zhang, 2016

17._POUND_10_/B

66.3 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 4
 Dapeng Zhang, 2016

18._POUND_10_/B

65.4 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 11
 Dapeng Zhang, 2016

19._POUND_10_/B GC-08-162-4-05

65.4 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

20._POUND_10_/B RUQ_1618

64.6 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

21._POUND_10_/B GC-01-115-6-12

60.5 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

22._POUND_10_/B

60.5 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 9
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

23._POUND_10_/B GC-01-115-6-12

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

24._POUND_10_/B GC-01-115-6-12

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018

25._POUND_10_/B GC-01-115-6-12

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP3
 Mars, 2018

26._POUND_10_/B GC-08-162-4-05

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

27._POUND_10_/B GC-08-163-4-06

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

28._POUND_10_/B GC-08-163-4-06

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

29._POUND_10_/B

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 1 > FP
 Dapeng Zhang, 2016

30._POUND_10_/B

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 11 > F
 Dapeng Zhang, 2016

31._POUND_10_/B

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1612 3 > FP
 Dapeng Zhang, 2016

32._POUND_10_/B

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8405 7
 Dapeng Zhang, 2016

33._POUND_10_/B

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8406 2
 Dapeng Zhang, 2016

34._POUND_10_/B

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8406 10
 Dapeng Zhang, 2016

35._POUND_10_/B RUQ_1618

60 %
40 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

36._POUND_10_/B

58.8 %
40 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F429 T13
 Dapeng Zhang, 2016

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25