SNP Profiles of POUND 4 /A   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCAGCGTTCTACTTGTCCCCAAAGCCAA
1._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
2._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
3._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
4._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
5._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
6._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
7._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
8._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
9._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
10._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
11._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
12._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
13._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
14._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
15._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
16._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
17._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
18._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
19._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
20._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
21._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
22._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
23._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
24._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
25._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
26._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
27._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
28._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
29._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
30._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
31._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
32._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
33._POUND_4_/A___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
34._POUND_4_/A___
CCAGGGTTCTCCTTGTCTCCATGGCCAA
35._POUND_4_/A___
CCAGGGCTTTACCC__CCCCAAAGCCAG
36._POUND_4_/A___
CCAGGGCTTTACCC__CCCCAAAGCCAG
37._POUND_4_/A___
CCAGGGCTTTACCCTTCCCCAAAGCCAG
38._POUND_4_/A___
CCAGGGCTTTACCCTTCCCCAAAGCCAG
39._POUND_4_/A___
CCAGGGCTTTACCCTTCCCCAAAGCCAG
40._POUND_4_/A___
CCAGGGCTTTACCCTTCCCCAAAGCCAG
41._POUND_4_/A___
CCAGGGCTTTACCCTTCCCCAAAGCCAG
42._POUND_4_/A___
CCAGGGCTTTACCCTTCCCCAAAGCCAG
43._POUND_4_/A___
CCAGGGCTTTACCCTTCCCCAAAGCCAG
44._POUND_4_/A___
CCAGGGCTTTACCCTTCCCCAAAGCCAG
45._POUND_4_/A___
CCGGCGCTCT__TTGGTTCCATGGCCAA
46._POUND_4_/A___
CCGGCGCTCT__TTGGTTCCATGGCCAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCATGGTTTTCGGGAACTAAGGGTCTCC
1._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
2._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
3._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
4._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
5._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
6._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
7._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
8._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
9._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
10._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
11._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
12._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
13._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
14._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
15._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
16._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
17._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
18._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
19._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
20._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
21._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
22._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
23._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
24._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
25._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
26._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
27._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
28._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
29._POUND_4_/A___
CCATGG__TTCGGGAACTAAGGGTCTCC
30._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
31._POUND_4_/A___
CCATGG__TTCGGGAACTAAGGGTCTCC
32._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
33._POUND_4_/A___
CCATGGTTTTCGGGAACTAAGGGTCTCC
34._POUND_4_/A___
CCAAGGCTTTCGGTAACCACCGGGCCAC
35._POUND_4_/A___
CCAACGCTCCGGGGAGTTAC__GGTTAA
36._POUND_4_/A___
CCAACGCTCCGGGGAGTTAC__GGTTAA
37._POUND_4_/A___
CCAACGCTCCGGGGAGTT__CGGGTTAA
38._POUND_4_/A___
CCAACGCTCCGGGGAGTT__CGGGTTAA
39._POUND_4_/A___
CCAACGCTCCGGGGAGTTACCGGGTTAA
40._POUND_4_/A___
CCAACGCTCCGGGGAGTTACCGGGTTAA
41._POUND_4_/A___
CCAACGCTCCGGGGAGTTACCGGGTTAA
42._POUND_4_/A___
CCAACGCTCCGGGGAGTTACCGGGTTAA
43._POUND_4_/A___
CCAACGCTCCGGGGAGTTACCGGGTTAA
44._POUND_4_/A___
CCAACGCTCCGGGGAGTTACCGGGTTAA
45._POUND_4_/A___
CTAACGTTTTCGGGGGTTCCGGGGCCAC
46._POUND_4_/A___
CTAACGTTTTCGGGGGTTCCGGGGCCAC
 29 30 31 32 33 34 35 36 37 38 39 40   
_Input profile
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
1._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
2._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
3._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
4._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
5._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
6._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
7._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
8._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
9._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
10._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
11._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
12._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
13._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
14._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
15._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
16._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
17._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
18._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
19._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
20._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
21._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
22._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
23._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
24._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
25._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
26._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
27._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
28._POUND_4_/A___
GGGGAACTAGCGAC__GGCCTTGGX_XX_X
29._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
30._POUND_4_/A___
GGGGAACTAGCGAC__GGCCTTGGX_XX_X
31._POUND_4_/A___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
32._POUND_4_/A___
AGGGAACTAGCGACCCGGCCTTGGX_XX_X
33._POUND_4_/A___
AGGGAACTAGCGACCCGGCCTTGGX_XX_X
34._POUND_4_/A___
AAAGAACTAACGACCTGGCCTTGGX_XX_X
35._POUND_4_/A___
AAGGAACCAGCCAACCGGAAATGGX_XX_X
36._POUND_4_/A___
AAGGAACCAGCCAACCGGAAATGGX_XX_X
37._POUND_4_/A___
AAGGAACCAGCCAACCGGAAATGGX_XX_X
38._POUND_4_/A___
AAGGAACCAGCCAACCGGAAATGGX_XX_X
39._POUND_4_/A___
AAGGAACCAGCCAACCGGAAATGGX_XX_X
40._POUND_4_/A___
AAGGAACCAGCCAACCGGAAATGGX_XX_X
41._POUND_4_/A___
AAGGAACCAGCCAACCGGAAATGGX_XX_X
42._POUND_4_/A___
AAGGAACCAGCCAACCGGAAATGGX_XX_X
43._POUND_4_/A___
AAGGAACCAGCCAACCGGAAATGGX_XX_X
44._POUND_4_/A___
AAGGAACCAGCCAACCGGAAATGGX_XX_X
45._POUND_4_/A___
AGAAATCCAGCCCCTTGGAAATCGX_XX_X
46._POUND_4_/A___
AGAAATCCAGCCCCTTGGAAATCGX_XX_X

Input profile: POUND_4_/A

 
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Mars Center for Cocoa Science, Brazil
Location: 8401 12
 Dapeng Zhang, 2016

1._POUND_4_/A GC-08-158-4-01

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

2._POUND_4_/A GC-04-043-3-07

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

3._POUND_4_/A GC-04-043-3-07

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP1
 Mars, 2018

4._POUND_4_/A GC-04-043-3-07

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP2
 Mars, 2018

5._POUND_4_/A GC-04-043-3-07

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

6._POUND_4_/A GC-04-043-3-07

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP4
 Mars, 2018

7._POUND_4_/A GC-08-158-4-01

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

8._POUND_4_/A GC-08-158-4-01

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

9._POUND_4_/A GC-08-158-4-01

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

10._POUND_4_/A GC-08-159-4-02

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

11._POUND_4_/A GC-08-159-4-02

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

12._POUND_4_/A GC-08-159-4-02

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

13._POUND_4_/A GC-08-159-4-02

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

14._POUND_4_/A GC-08-158-4-01

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

15._POUND_4_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 1
 Dapeng Zhang, 2016

16._POUND_4_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 2 > FP
 Dapeng Zhang, 2016

17._POUND_4_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 3 > FP
 Dapeng Zhang, 2016

18._POUND_4_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 4 > FP
 Dapeng Zhang, 2016

19._POUND_4_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 7 > FP
 Dapeng Zhang, 2016

20._POUND_4_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8401 5
 Dapeng Zhang, 2016

21._POUND_4_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8401 7
 Dapeng Zhang, 2016

22._POUND_4_/A

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8401 7
 Dapeng Zhang, 2016

23._POUND_4_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8401 11
 Dapeng Zhang, 2016

24._POUND_4_/A

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8402 6
 Dapeng Zhang, 2016

25._POUND_4_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 7
 Dapeng Zhang, 2016

26._POUND_4_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 9
 Dapeng Zhang, 2016

27._POUND_4_/A

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 12
 Dapeng Zhang, 2016

28._POUND_4_/A GC-04-043-3-07

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

29._POUND_4_/A GC-08-158-4-01

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

30._POUND_4_/A

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 5
 Dapeng Zhang, 2016

31._POUND_4_/A

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8401 9
 Dapeng Zhang, 2016

32._POUND_4_/A GC-04-043-3-07

98.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

33._POUND_4_/A

98.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 6
 Dapeng Zhang, 2016

34._POUND_4_/A

76.3 %
40 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F411 T15
 Dapeng Zhang, 2016

35._POUND_4_/A GC-08-159-4-02

64.5 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

36._POUND_4_/A

64.5 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 5
 Dapeng Zhang, 2016

37._POUND_4_/A GC-08-158-4-01

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

38._POUND_4_/A

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8401 8
 Dapeng Zhang, 2016

39._POUND_4_/A

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 13
 Dapeng Zhang, 2016

40._POUND_4_/A GC-08-159-4-02

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

41._POUND_4_/A GC-08-159-4-02

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

42._POUND_4_/A GC-08-159-4-02

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

43._POUND_4_/A

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 10
 Dapeng Zhang, 2016

44._POUND_4_/A

63.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 8
 Dapeng Zhang, 2016

45._POUND_4_/A GC-08-159-4-02

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

46._POUND_4_/A

60.3 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 4
 Dapeng Zhang, 2016

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25