SNP Profiles of NA 149   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCAAGGTTTTCCTTTTCCAAGGCCGGTT
1._POUND_5_/C___
CCAAGGTTTT__TTTTCCAAGGCCGGTT
2._POUND_5_/C___
CCAAGGTTTT__TTTTCCAAGGCCGGTT
3._POUND_5_/C___
CCAAGGTTTT__TTTTCCAAGGCCGGTT
4._POUND_5_/C___
CCAAGGTTTT__TTTTCCAAGGCCGGTT
5._POUND_5_/C___
CCAAGGTTTT__TTTTCCAAGGCCGGTT
6._POUND_5_/C___
CCAAGGTTTT__TTTTCCAAGGCCGGTT
7._POUND_5_/C___
CCAAGGTTTT__TTTTCCAAGGCCGGTT
8._POUND_5_/C___
CCAAGGTTTT__TTTTCCAAGGCCGGTT
9._POUND_5_/C___
GGAACCAAAACCAAAA__AAGGGGGGAA
10._POUND_5_/C___
AAGGCCGGAAAAGGAA__AAAAGGGGAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAGGCCCCGGGGAACCAAGGGGCTCCAA
1._POUND_5_/C___
AAGGCCCCGGGGAACCAAGGGGCTCCAA
2._POUND_5_/C___
AAGGCCCCGGGGAACCAAGGGGCTCCAA
3._POUND_5_/C___
AAGGCCCCGGGGAACCAAGGGGCTCCAA
4._POUND_5_/C___
AAGGCCCCGGGGAACCAAGGGGCTCCAA
5._POUND_5_/C___
AAGGCCCCGGGGAACCAAGGGGCTCCAA
6._POUND_5_/C___
AAGGCCCCGGGGAACCAAGGGGCTCCAA
7._POUND_5_/C___
AAGGCCCCGGGGAACCAAGGGGCTCCAA
8._POUND_5_/C___
AAGGCCCCGGGGAACCAAGGGGCTCCAA
9._POUND_5_/C___
AAGGGGGGCCCC__GGAAGGCC__CC__
10._POUND_5_/C___
AACCAAGGCCCC__AAAACCAA__CC__
 29 30 31 32 33 34 35 36 37 38     
_Input profile
GGAACCAGAACCGGCCTTGGX_XX_XX_XX_X
1._POUND_5_/C___
GGAACCAGAACCGGCCTTGGX_XX_XX_XX_X
2._POUND_5_/C___
GGAACCAGAACCGGCCTTGGX_XX_XX_XX_X
3._POUND_5_/C___
GGAACCAGAACCGGCCTTGGX_XX_XX_XX_X
4._POUND_5_/C___
GGAACCAGAACCGGCCTTGGX_XX_XX_XX_X
5._POUND_5_/C___
GGAACCAGAACCGGCCTTGGX_XX_XX_XX_X
6._POUND_5_/C___
GGAACCAGAACCGGCCTTGGX_XX_XX_XX_X
7._POUND_5_/C___
GGAACCAGAACCGGCCTTGGX_XX_XX_XX_X
8._POUND_5_/C___
GGAACCAGAACCGGCCTTGGX_XX_XX_XX_X
9._POUND_5_/C___
GGAAGGAGAAGGCCCCTTGGX_XX_XX_XX_X
10._POUND_5_/C___
GGAAGGAAAAGGAAAATTGGX_XX_XX_XX_X

Input profile: POUND_5_/C

 
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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B A77 T10
 Dapeng Zhang, 2016

1._POUND_5_/C

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8408 4
 Dapeng Zhang, 2016

2._POUND_5_/C

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8408 5
 Dapeng Zhang, 2016

3._POUND_5_/C

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8408 6
 Dapeng Zhang, 2016

4._POUND_5_/C

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8408 11
 Dapeng Zhang, 2016

5._POUND_5_/C GC-08-165-4-08

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

6._POUND_5_/C GC-08-165-4-08

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

7._POUND_5_/C GC-08-165-4-08

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

8._POUND_5_/C GC-08-165-4-08

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

9._POUND_5_/C GC-01-118-6-15

50 %
34 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 15, Tree: 1 > FP1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

10._POUND_5_/C GC-01-118-6-15

30.9 %
34 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 15, Tree: 13
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1075
11TcSNP1062 12TcSNP1060 13TcSNP998 14TcSNP994 15TcSNP953
16TcSNP929 17TcSNP917 18TcSNP891 19TcSNP872 20TcSNP723
21TcSNP645 22TcSNP619 23TcSNP591 24TcSNP577 25TcSNP560
26TcSNP534 27TcSNP529 28TcSNP469 29TcSNP429 30TcSNP372
31TcSNP242 32TcSNP230 33TcSNP193 34TcSNP151 35TcSNP150
36TcSNP144 37TcSNP32 38TcSNP25