SNP Profiles of POUND 4 /A   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCAGCGTTCTACTTGTCCCCAAAGCCAA
1._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
2._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
3._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
4._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
5._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
6._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
7._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
8._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
9._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
10._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
11._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
12._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
13._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
14._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
15._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
16._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
17._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
18._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
19._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
20._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
21._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
22._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
23._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
24._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
25._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
26._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
27._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
28._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
29._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
30._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
31._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
32._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
33._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
34._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
35._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
36._POUND_4_/B___
CCAGCGTTCTACTTGTCCCCAAAGCCAA
37._POUND_4_/B___
__AGCGTT______GT________CCAA
38._POUND_4_/B___
GGAGCGAAAGACAAAA____AAAGGGAA
39._POUND_4_/B___
GGAGCGAAAGACAAAA____AAAGGGAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCATGGTTTTCGGGAACTAAGGGTCTCC
1._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
2._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
3._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
4._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
5._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
6._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
7._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
8._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
9._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
10._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
11._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
12._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
13._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
14._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
15._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
16._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
17._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
18._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
19._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
20._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
21._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
22._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
23._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
24._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
25._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
26._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
27._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
28._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
29._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
30._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
31._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
32._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
33._POUND_4_/B___
CCATGG__TTCGGGAACTAAGGGTCTCC
34._POUND_4_/B___
CCATGG__TTCGGGAACTAAGGGTCTCC
35._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
36._POUND_4_/B___
CCATGGTTTTCGGGAACTAAGGGTCTCC
37._POUND_4_/B___
________TTCGGG__CTAACGGTCTCC
38._POUND_4_/B___
GGATGGAAAACGCC__AGAACGAC__CC
39._POUND_4_/B___
GGATGGAAAACGCC__AGAACGAC__CC
 29 30 31 32 33 34 35 36 37 38 39 40   
_Input profile
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
1._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
2._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
3._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
4._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
5._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
6._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
7._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
8._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
9._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
10._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
11._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
12._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
13._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
14._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
15._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
16._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
17._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
18._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
19._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
20._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
21._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
22._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
23._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
24._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
25._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
26._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
27._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
28._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
29._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
30._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
31._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
32._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
33._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
34._POUND_4_/B___
GGGGAACTAGCGACCCGGCCTTGGX_XX_X
35._POUND_4_/B___
GGGGAACTAGCGACCTGGCCTTGGX_XX_X
36._POUND_4_/B___
GGGGAACTAGCGACCTGGCCTTGGX_XX_X
37._POUND_4_/B___
GG__AACTAGCGACCCGGCC____X_XX_X
38._POUND_4_/B___
__GGAAAGAGCGACGGCCCCTTGGX_XX_X
39._POUND_4_/B___
__GGAAAGAGCGACGGCCCCTTGGX_XX_X

Input profile: POUND_4_/B

 
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Mars Center for Cocoa Science, Brazil
Location: 3301 5
 Dapeng Zhang, 2016

1._POUND_4_/B GC-03-027-3-01

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

2._POUND_4_/B GC-03-27-3-01

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 3, Rep: 1, Tree: PL1
Notes: PL1 FP1
 Mars, 2018

3._POUND_4_/B GC-03-27-3-01

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 3, Rep: 1, Tree: PL10
Notes: PL10 FP2
 Mars, 2018

4._POUND_4_/B GC-03-27-3-01

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 3, Rep: 1, Tree: PL11
Notes: PL11 FP4
 Mars, 2018

5._POUND_4_/B GC-03-27-3-01

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 3, Rep: 1, Tree: PL14
Notes: PL14 FP3
 Mars, 2018

6._POUND_4_/B GC-03-027-3-01

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

7._POUND_4_/B GC-03-027-3-01

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

8._POUND_4_/B GC-03-027-3-01

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

9._POUND_4_/B GC-03-027-3-01

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

10._POUND_4_/B GC-03-027-3-01

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

11._POUND_4_/B GC-05-019-1-19

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

12._POUND_4_/B GC-05-019-1-19

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

13._POUND_4_/B GC-05-019-1-19

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

14._POUND_4_/B GC-05-155-4-08

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

15._POUND_4_/B GC-05-155-4-08

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

16._POUND_4_/B GC-05-155-4-08

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

17._POUND_4_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5119 2
 Dapeng Zhang, 2016

18._POUND_4_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 2
 Dapeng Zhang, 2016

19._POUND_4_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 3
 Dapeng Zhang, 2016

20._POUND_4_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 6
 Dapeng Zhang, 2016

21._POUND_4_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 8
 Dapeng Zhang, 2016

22._POUND_4_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 13
 Dapeng Zhang, 2016

23._POUND_4_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 1 > FP
 Dapeng Zhang, 2016

24._POUND_4_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 10 > F
 Dapeng Zhang, 2016

25._POUND_4_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 11 > F
 Dapeng Zhang, 2016

26._POUND_4_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 3301 14 > F
 Dapeng Zhang, 2016

27._POUND_4_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5119 5
 Dapeng Zhang, 2016

28._POUND_4_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5119 1 > FP
 Dapeng Zhang, 2016

29._POUND_4_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5408 2
 Dapeng Zhang, 2016

30._POUND_4_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5408 3
 Dapeng Zhang, 2016

31._POUND_4_/B

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5408 5
 Dapeng Zhang, 2016

32._POUND_4_/B RUQ_23

identical
40 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

33._POUND_4_/B GC-05-019-1-19

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

34._POUND_4_/B

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5119 4
 Dapeng Zhang, 2016

35._POUND_4_/B GC-05-155-4-08

98.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

36._POUND_4_/B

98.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 5408 4
 Dapeng Zhang, 2016

37._POUND_4_/B RUQ_23

97.9 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

38._POUND_4_/B

55.7 %
35 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: FP 3
 Mars, 2018

39._POUND_4_/B

55.7 %
35 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: FP 1
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25