SNP Profiles of NACIONAL View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
1._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
2._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
3._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
4._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
5._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
6._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
7._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
8._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
9._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
10._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
11._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
12._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
13._CATONGO___	TT	GG	GG	TT	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
14._CATONGO___	TT	GG	GG	TT	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
15._CATONGO___	TT	GG	GG	TT	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
16._CATONGO___	TT	GG	GG	TT	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
17._CATONGO___	TT	GG	GG	TT	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
18._CATONGO___	TT	GG	GG	TT	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
19._CATONGO___	TT	GG	GG	TT	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA	GG
1._CATONGO___	AA	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA	GG
2._CATONGO___	AA	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA	GG
3._CATONGO___	AA	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA	GG
4._CATONGO___	AA	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA	GG
5._CATONGO___	AA	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA	GG
6._CATONGO___	AA	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA	GG
7._CATONGO___	AA	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA	GG
8._CATONGO___	AA	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	__	AA	GG
9._CATONGO___	__	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA	GG
10._CATONGO___	AA	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	__	AA	GG
11._CATONGO___	AA	CC	CC	GG	GG	AA	TT	AA	CC	TT	TT	CC	AA	GG
12._CATONGO___	AA	CC	CC	GG	GG	AA	TT	AA	CC	TT	TT	CC	AA	GG
13._CATONGO___	AA	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA	GG
14._CATONGO___	AA	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA	GG
15._CATONGO___	AA	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA	GG
16._CATONGO___	AA	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA	GG
17._CATONGO___	AA	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA	GG
18._CATONGO___	AA	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA	GG
19._CATONGO___	AA	CC	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA	GG

	29	30	31	32	33	34	35	36	37	38
_Input profile	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X	X_X
1._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X	X_X
2._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X	X_X
3._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X	X_X
4._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X	X_X
5._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X	X_X
6._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X	X_X
7._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X	X_X
8._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X	X_X
9._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X	X_X
10._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X	X_X
11._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X	X_X
12._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X	X_X
13._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X	X_X	X_X
14._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X	X_X	X_X
15._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X	X_X	X_X
16._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X	X_X	X_X
17._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X	X_X	X_X
18._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X	X_X	X_X
19._CATONGO___	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X	X_X	X_X

Input profile: CATONGO

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 3

Dapeng Zhang, 2016

1._CATONGO

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8308 3

Dapeng Zhang, 2016

2._CATONGO

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8308 2 > FP

Dapeng Zhang, 2016

3._CATONGO

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 5

Dapeng Zhang, 2016

4._CATONGO

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 10

Dapeng Zhang, 2016

5._CATONGO

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 2 > FP

Dapeng Zhang, 2016

6._CATONGO

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 9 > FP

Dapeng Zhang, 2016

7._CATONGO

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8308 1

Dapeng Zhang, 2016

8._CATONGO

identical
37 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 8

Dapeng Zhang, 2016

9._CATONGO

identical
37 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 6

Dapeng Zhang, 2016

10._CATONGO

identical
37 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 4 > FP

Dapeng Zhang, 2016

11._CATONGO

97.4 %
38 shared markers

View View all Clone Any

Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica

Location: Cabiria

Dapeng Zhang, 2016

12._CATONGO

97.4 %
38 shared markers

View View all Clone Any

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B D254 T1

Dapeng Zhang, 2016

13._CATONGO

96.1 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 7

Dapeng Zhang, 2016

14._CATONGO

96.1 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 8 > FP

Dapeng Zhang, 2016

15._CATONGO

96.1 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 1

Dapeng Zhang, 2016

16._CATONGO

96.1 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 2

Dapeng Zhang, 2016

17._CATONGO

96.1 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 4

Dapeng Zhang, 2016

18._CATONGO

96.1 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 6

Dapeng Zhang, 2016

19._CATONGO

96.1 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 7

Dapeng Zhang, 2016

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1165	9	TcSNP1144	10	TcSNP1075
11	TcSNP1062	12	TcSNP1060	13	TcSNP998	14	TcSNP994	15	TcSNP953
16	TcSNP929	17	TcSNP891	18	TcSNP872	19	TcSNP723	20	TcSNP645
21	TcSNP619	22	TcSNP591	23	TcSNP577	24	TcSNP560	25	TcSNP534
26	TcSNP529	27	TcSNP469	28	TcSNP429	29	TcSNP372	30	TcSNP242
31	TcSNP230	32	TcSNP226	33	TcSNP193	34	TcSNP151	35	TcSNP150
36	TcSNP144	37	TcSNP32	38	TcSNP25

SNP Profiles of NACIONAL View Data

Show/Hide Profiles

Input profile: CATONGO

1._CATONGO

identical 38 shared markers

2._CATONGO

identical 38 shared markers

3._CATONGO

identical 38 shared markers

4._CATONGO

identical 38 shared markers

5._CATONGO

identical 38 shared markers

6._CATONGO

identical 38 shared markers

7._CATONGO

identical 38 shared markers

8._CATONGO

identical 37 shared markers

9._CATONGO

identical 37 shared markers

10._CATONGO

identical 37 shared markers

11._CATONGO

97.4 % 38 shared markers

12._CATONGO

97.4 % 38 shared markers

13._CATONGO

96.1 % 38 shared markers

14._CATONGO

96.1 % 38 shared markers

15._CATONGO

96.1 % 38 shared markers

16._CATONGO

96.1 % 38 shared markers

17._CATONGO

96.1 % 38 shared markers

18._CATONGO

96.1 % 38 shared markers

19._CATONGO

96.1 % 38 shared markers

identical
38 shared markers

identical
38 shared markers

identical
38 shared markers

identical
38 shared markers

identical
38 shared markers

identical
38 shared markers

identical
38 shared markers

identical
37 shared markers

identical
37 shared markers

identical
37 shared markers

97.4 %
38 shared markers

97.4 %
38 shared markers

96.1 %
38 shared markers

96.1 %
38 shared markers

96.1 %
38 shared markers

96.1 %
38 shared markers

96.1 %
38 shared markers

96.1 %
38 shared markers

96.1 %
38 shared markers