SNP Profiles of NACIONAL View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
1._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
2._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
3._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
4._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
5._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
6._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
7._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
8._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
9._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
10._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
11._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
12._CATONGO___	TT	GG	GG	CC	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
13._CATONGO___	TT	GG	GG	TT	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
14._CATONGO___	TT	GG	GG	TT	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
15._CATONGO___	TT	GG	GG	TT	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
16._CATONGO___	TT	GG	GG	TT	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
17._CATONGO___	TT	GG	GG	TT	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
18._CATONGO___	TT	GG	GG	TT	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT
19._CATONGO___	TT	GG	GG	TT	TT	AA	CC	CC	TT	AA	AA	CC	GG	TT

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
1._CATONGO___	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
2._CATONGO___	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
3._CATONGO___	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
4._CATONGO___	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
5._CATONGO___	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
6._CATONGO___	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
7._CATONGO___	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	__	AA
8._CATONGO___	AA	CC	__	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
9._CATONGO___	__	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
10._CATONGO___	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	__	AA
11._CATONGO___	AA	CC	TT	CC	GG	GG	AA	TT	AA	CC	TT	TT	CC	AA
12._CATONGO___	AA	CC	TT	CC	GG	GG	AA	TT	AA	CC	TT	TT	CC	AA
13._CATONGO___	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
14._CATONGO___	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
15._CATONGO___	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
16._CATONGO___	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
17._CATONGO___	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
18._CATONGO___	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA
19._CATONGO___	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC	AA

	29	30	31	32	33	34	35	36	37	38	39
_Input profile	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X
1._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X
2._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X
3._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X
4._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X
5._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X
6._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X
7._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X
8._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X
9._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X
10._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X
11._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X
12._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X	X_X
13._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X	X_X
14._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X	X_X
15._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X	X_X
16._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X	X_X
17._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X	X_X
18._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X	X_X
19._CATONGO___	GG	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X	X_X

Input profile: CATONGO

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 2 > FP

Dapeng Zhang, 2016

1._CATONGO

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8308 3

Dapeng Zhang, 2016

2._CATONGO

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8308 2 > FP

Dapeng Zhang, 2016

3._CATONGO

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 5

Dapeng Zhang, 2016

4._CATONGO

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 10

Dapeng Zhang, 2016

5._CATONGO

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 9 > FP

Dapeng Zhang, 2016

6._CATONGO

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8308 1

Dapeng Zhang, 2016

7._CATONGO

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 8

Dapeng Zhang, 2016

8._CATONGO

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 3

Dapeng Zhang, 2016

9._CATONGO

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 6

Dapeng Zhang, 2016

10._CATONGO

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 4 > FP

Dapeng Zhang, 2016

11._CATONGO

97.4 %
39 shared markers

View View all Clone Any

Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica

Location: Cabiria

Dapeng Zhang, 2016

12._CATONGO

97.4 %
39 shared markers

View View all Clone Any

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B D254 T1

Dapeng Zhang, 2016

13._CATONGO

96.2 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 7

Dapeng Zhang, 2016

14._CATONGO

96.2 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 8 > FP

Dapeng Zhang, 2016

15._CATONGO

96.2 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 1

Dapeng Zhang, 2016

16._CATONGO

96.2 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 2

Dapeng Zhang, 2016

17._CATONGO

96.2 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 4

Dapeng Zhang, 2016

18._CATONGO

96.2 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 6

Dapeng Zhang, 2016

19._CATONGO

96.2 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 7

Dapeng Zhang, 2016

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1165	9	TcSNP1144	10	TcSNP1075
11	TcSNP1062	12	TcSNP1060	13	TcSNP998	14	TcSNP994	15	TcSNP953
16	TcSNP929	17	TcSNP917	18	TcSNP891	19	TcSNP872	20	TcSNP723
21	TcSNP645	22	TcSNP619	23	TcSNP591	24	TcSNP577	25	TcSNP560
26	TcSNP534	27	TcSNP529	28	TcSNP469	29	TcSNP429	30	TcSNP372
31	TcSNP242	32	TcSNP230	33	TcSNP226	34	TcSNP193	35	TcSNP151
36	TcSNP150	37	TcSNP144	38	TcSNP32	39	TcSNP25

SNP Profiles of NACIONAL View Data

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Input profile: CATONGO

1._CATONGO

identical 39 shared markers

2._CATONGO

identical 39 shared markers

3._CATONGO

identical 39 shared markers

4._CATONGO

identical 39 shared markers

5._CATONGO

identical 39 shared markers

6._CATONGO

identical 39 shared markers

7._CATONGO

identical 38 shared markers

8._CATONGO

identical 38 shared markers

9._CATONGO

identical 38 shared markers

10._CATONGO

identical 38 shared markers

11._CATONGO

97.4 % 39 shared markers

12._CATONGO

97.4 % 39 shared markers

13._CATONGO

96.2 % 39 shared markers

14._CATONGO

96.2 % 39 shared markers

15._CATONGO

96.2 % 39 shared markers

16._CATONGO

96.2 % 39 shared markers

17._CATONGO

96.2 % 39 shared markers

18._CATONGO

96.2 % 39 shared markers

19._CATONGO

96.2 % 39 shared markers

identical
39 shared markers

identical
39 shared markers

identical
39 shared markers

identical
39 shared markers

identical
39 shared markers

identical
39 shared markers

identical
38 shared markers

identical
38 shared markers

identical
38 shared markers

identical
38 shared markers

97.4 %
39 shared markers

97.4 %
39 shared markers

96.2 %
39 shared markers

96.2 %
39 shared markers

96.2 %
39 shared markers

96.2 %
39 shared markers

96.2 %
39 shared markers

96.2 %
39 shared markers

96.2 %
39 shared markers