SNP Profiles of NACIONAL View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	GG	GG	TT	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG
1._CATONGO___	TT	GG	GG	TT	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG
2._CATONGO___	TT	GG	GG	TT	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG
3._CATONGO___	TT	GG	GG	TT	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG
4._CATONGO___	TT	GG	GG	TT	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG
5._CATONGO___	TT	GG	GG	TT	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG
6._CATONGO___	TT	GG	GG	TT	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG
7._CATONGO___	TT	GG	GG	CC	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG
8._CATONGO___	TT	GG	GG	CC	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG
9._CATONGO___	TT	GG	GG	CC	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG
10._CATONGO___	TT	GG	GG	CC	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG
11._CATONGO___	TT	GG	GG	CC	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG
12._CATONGO___	TT	GG	GG	CC	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG
13._CATONGO___	TT	GG	GG	CC	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG
14._CATONGO___	TT	GG	GG	CC	TT	AA	CC	__	CC	TT	AA	AA	CC	GG
15._CATONGO___	TT	GG	GG	CC	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG
16._CATONGO___	TT	GG	GG	CC	TT	AA	CC	__	CC	TT	AA	AA	CC	GG
17._CATONGO___	TT	GG	GG	CC	TT	AA	CC	__	CC	TT	AA	AA	CC	GG
18._CATONGO___	TT	GG	GG	CC	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG
19._CATONGO___	TT	GG	GG	CC	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	TT	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC
1._CATONGO___	TT	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC
2._CATONGO___	TT	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC
3._CATONGO___	TT	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC
4._CATONGO___	TT	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC
5._CATONGO___	TT	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC
6._CATONGO___	TT	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC
7._CATONGO___	TT	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC
8._CATONGO___	TT	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC
9._CATONGO___	TT	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC
10._CATONGO___	TT	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC
11._CATONGO___	TT	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC
12._CATONGO___	TT	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC
13._CATONGO___	TT	__	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC
14._CATONGO___	TT	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC
15._CATONGO___	TT	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	__
16._CATONGO___	TT	AA	CC	__	CC	GG	GG	GG	TT	AA	CC	TT	TT	CC
17._CATONGO___	TT	AA	CC	TT	CC	GG	GG	GG	TT	AA	CC	TT	TT	__
18._CATONGO___	TT	AA	CC	TT	CC	GG	GG	AA	TT	AA	CC	TT	TT	CC
19._CATONGO___	TT	AA	CC	TT	CC	GG	GG	AA	TT	AA	CC	TT	TT	CC

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	AA	GG	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X
1._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X
2._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X
3._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X
4._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X
5._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X
6._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AC	TT	GG	X_X	X_X
7._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X
8._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X
9._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X
10._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X
11._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X
12._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X
13._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X
14._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X
15._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X
16._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X
17._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X
18._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X
19._CATONGO___	AA	GG	AA	CC	AA	CC	AA	CC	TT	AA	TT	GG	X_X	X_X

Input profile: CATONGO

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 8 > FP

Dapeng Zhang, 2016

1._CATONGO

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 7

Dapeng Zhang, 2016

2._CATONGO

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 1

Dapeng Zhang, 2016

3._CATONGO

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 2

Dapeng Zhang, 2016

4._CATONGO

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 4

Dapeng Zhang, 2016

5._CATONGO

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 6

Dapeng Zhang, 2016

6._CATONGO

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 7

Dapeng Zhang, 2016

7._CATONGO

96.3 %
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 9 > FP

Dapeng Zhang, 2016

8._CATONGO

96.3 %
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8308 3

Dapeng Zhang, 2016

9._CATONGO

96.3 %
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8308 2 > FP

Dapeng Zhang, 2016

10._CATONGO

96.3 %
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 5

Dapeng Zhang, 2016

11._CATONGO

96.3 %
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 10

Dapeng Zhang, 2016

12._CATONGO

96.3 %
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8308 1

Dapeng Zhang, 2016

13._CATONGO

96.2 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 6

Dapeng Zhang, 2016

14._CATONGO

96.2 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 2 > FP

Dapeng Zhang, 2016

15._CATONGO

96.2 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8850 8

Dapeng Zhang, 2016

16._CATONGO

96.1 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 3

Dapeng Zhang, 2016

17._CATONGO

96.1 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8849 4 > FP

Dapeng Zhang, 2016

18._CATONGO

93.8 %
40 shared markers

View View all Clone Any

Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica

Location: Cabiria

Dapeng Zhang, 2016

19._CATONGO

93.8 %
40 shared markers

View View all Clone Any

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B D254 T1

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25