SNP Profiles of GU-154C   View Data

 Show/Hide Profiles

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AACCACGGGGCTCCCCCCGGTTCCTTAA
1._GU_154_/C___
AACCACGGGGCTCCCCCCGGTTCCTTAA
2._GU_154_/C___
AACCACGGGGCTCCCCCCGGTTCCTTAA
3._GU_154_/C___
AACCACGGGGCTCCCCCCGGTTCCTTAA
4._GU_154_/C___
AACCACGGGGCTCCCCCCGGTTCCTTAA
5._GU_154_/C___
AACCACGGGGCTCCCCCCGGTTCCTTAA
6._GU_154_/C___
AACCACGGGGCTCCCCCCGGTTCCTTAA
7._GU_154_/C___
AACCACGGGGCTCCCCCCGGTTCCTTAA
8._GU_154_/C___
AACCACGGGGCTCCCCCCGGTTCCTTAA
9._GU_154_/C___
AACCACGGGGCTCCCCCCGGTTCCTTAA
10._GU_154_/C___
AACCACGGGGCTCCCCCCGGTTCCTTAA
11._GU_154_/C___
AACCACGGGGCTCCCCCCGGTTCCTTAA
12._GU_154_/C___
AACCACGGGGCTCC__CCGGTTCCTTAA
13._GU_154_/C___
AACCACGGGGCTCCCCCCGGTTCCTTAA
14._GU_154_/C___
AACCAC________CCCCGG__CC____
15._GU_154_/C___
AACCAC________CCCCGG__CC____
16._GU_154_/C___
AACCAC________CCCCGG__CC____
17._GU_154_/C___
AACCAC________CCCCGG__CC____
18._GU_154_/C___
AACCAC________CCCCGG__CC____
19._GU_154_/C___
AACCAC________CCCCGG__CC____
20._GU_154_/C___
AACCAC________CCCCGG__CC____
21._GU_154_/C___
AACCAC________CCCCGG__CC____
22._GU_154_/C___
AACCAC________CCCCGG__CC____
23._GU_154_/C___
AACCAC________CCCCGG__CC____
24._GU_154_/C___
AACCAC________CCCCGG__CC____
25._GU_154_/C___
AACCAC__________CCGG__CC____
26._GU_154_/C___
AACCAC________CCCCGG__CC____
27._GU_154_/C___
AACCAC________CCCCGG__CC____
28._GU_154_/C___
AA__ACGGGG__GGGG__GGAAGGAATT
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCGGGGCCGGCTAATTGGATAACCGGAA
1._GU_154_/C___
CCGGGGCCGGCTAATTGGATAACCGGAA
2._GU_154_/C___
CCGGGGCCGGCTAATTGGATAACCGGAA
3._GU_154_/C___
CCGGGGCCGGCTAATTGGATAACCGGAA
4._GU_154_/C___
CCGGGGCCGGCTAATTGGATAACCGGAA
5._GU_154_/C___
CCGGGGCCGGCTAATTGGATAACCGGAA
6._GU_154_/C___
CCGGGGCCGGCTAATTGGATAACCGGAA
7._GU_154_/C___
CCGGGGCCGGCTAATTGGATAACCGGAA
8._GU_154_/C___
CCGGGGCCGGCTAATTGGATAACCGGAA
9._GU_154_/C___
CCGGGGCCGGCTAATTGGATAACCGGAA
10._GU_154_/C___
CCGGGGCCGGCTAATTGGATAACCGGAA
11._GU_154_/C___
CCGGGGCCGGCTAATTGGAT__CCGGAA
12._GU_154_/C___
CCGGGGCCGGCTAATTGGATAACCGGAA
13._GU_154_/C___
CCGGGGCCGGCTAATTGGATAACCGGAA
14._GU_154_/C___
__GG____GG________ATAA__GGAA
15._GU_154_/C___
__GG____GG________ATAA__GGAA
16._GU_154_/C___
__GG____GG________ATAA__GGAA
17._GU_154_/C___
__GG____GG________ATAA__GGAA
18._GU_154_/C___
__GG____GG________ATAA__GGAA
19._GU_154_/C___
__GG____GG________ATAA__GGAA
20._GU_154_/C___
__GG____GG________ATAA__GGAA
21._GU_154_/C___
__GG____GG________ATAA__GGAA
22._GU_154_/C___
__GG____GG________ATAA__GGAA
23._GU_154_/C___
__GG____GG________ATAA__GGAA
24._GU_154_/C___
__GG____GG________ATAA__GGAA
25._GU_154_/C___
__GG____GG________ATAA__GGAA
26._GU_154_/C___
__GG____GG________ATAA__GGAA
27._GU_154_/C___
__GG____GG________AT____GGAA
28._GU_154_/C___
CCGGCC__GGAGGGAAGGATAAGGCCAA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
TTTTGGCCCCAGTTGGGGGGCCGGCCGG
1._GU_154_/C___
TTTTGGCCCCAGTTGGGGGGCCGGCCGG
2._GU_154_/C___
TTTTGGCCCCAGTTGGGGGGCCGGCCGG
3._GU_154_/C___
TTTTGGCCCCAGTTGGGGGGCCGGCCGG
4._GU_154_/C___
TTTTGGCCCCAGTTGGGGGGCCGGCCGG
5._GU_154_/C___
TTTTGGCCCCAGTTGGGGGGCCGGCCGG
6._GU_154_/C___
TTTTGGCCCCAGTTGGGGGGCCGGCCGG
7._GU_154_/C___
TTTTGGCCCCAGTTGGGGGGCCGGCCGG
8._GU_154_/C___
TTTTGGCCCCAGTTGGGGGGCCGGCCGG
9._GU_154_/C___
TTTTGGCCCCAGTTGGGGGGCCGGCCGG
10._GU_154_/C___
TTTTGGCCCCAGTTGGGGGGCCGGCCGG
11._GU_154_/C___
TTTTGGCCCCAGTTGGGGGGCCGGCCGG
12._GU_154_/C___
TTTTGGCC__AGTTGGGGGGCCGGCCGG
13._GU_154_/C___
TTTTGGCCCCAGTTGGGGGGCC__CCGG
14._GU_154_/C___
______CC__AGTT____GG________
15._GU_154_/C___
______CC__AGTT____GG________
16._GU_154_/C___
______CC__AGTT____GG________
17._GU_154_/C___
______CC__AGTT____GG________
18._GU_154_/C___
______CC__AGTT____GG________
19._GU_154_/C___
______CC__AGTT____GG________
20._GU_154_/C___
______CC__AGTT____GG________
21._GU_154_/C___
______CC__AGTT____GG________
22._GU_154_/C___
______CC__AGTT____GG________
23._GU_154_/C___
______CC__AGTT____GG________
24._GU_154_/C___
______CC__AGTT____GG________
25._GU_154_/C___
______CC__AGTT____GG________
26._GU_154_/C___
______CC__AGTT____GG________
27._GU_154_/C___
______CC__AGTT____GG________
28._GU_154_/C___
AAAAGGCCCCAGAACCCCGGGGGGGGCC
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
TTTTAAGGAACCCCGGGGTTTTTTCCTT
1._GU_154_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
2._GU_154_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
3._GU_154_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
4._GU_154_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
5._GU_154_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
6._GU_154_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
7._GU_154_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
8._GU_154_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
9._GU_154_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
10._GU_154_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
11._GU_154_/C___
TTTTAAGGAACCCCGGGGTTTTTTCCTT
12._GU_154_/C___
TTTTAAGG__CCCCGGGGTTTTTTCCTT
13._GU_154_/C___
__TTAAGG__CCCCGGGGTTTTTTCCTT
14._GU_154_/C___
__TT__________________TTCC__
15._GU_154_/C___
__TT__________________TTCC__
16._GU_154_/C___
__TT__________________TTCC__
17._GU_154_/C___
__TT__________________TTCC__
18._GU_154_/C___
__TT__________________TTCC__
19._GU_154_/C___
__TT__________________TTCC__
20._GU_154_/C___
__TT__________________TTCC__
21._GU_154_/C___
__TT__________________TTCC__
22._GU_154_/C___
__TT__________________TTCC__
23._GU_154_/C___
__TT__________________TTCC__
24._GU_154_/C___
__TT__________________TTCC__
25._GU_154_/C___
__TT__________________TTCC__
26._GU_154_/C___
__TT__________________TTCC__
27._GU_154_/C___
__TT__________________TTCC__
28._GU_154_/C___
__AA__GGAAGG__GGGGAAAAAAGGAA
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
GGCCCCCCAAGGGGAAGGGGGGAACCCC
1._GU_154_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
2._GU_154_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
3._GU_154_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
4._GU_154_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
5._GU_154_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
6._GU_154_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
7._GU_154_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
8._GU_154_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
9._GU_154_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
10._GU_154_/C___
GGCCCCCC__GGGGAAGGGGGGAACCCC
11._GU_154_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
12._GU_154_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
13._GU_154_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
14._GU_154_/C___
__CC__CCAAGG__AAGGGGGG______
15._GU_154_/C___
__CC__CCAAGG__AAGGGGGG______
16._GU_154_/C___
__CC__CCAAGG__AAGGGGGG______
17._GU_154_/C___
__CC__CCAAGG__AAGGGGGG______
18._GU_154_/C___
__CC__CCAAGG__AAGGGGGG______
19._GU_154_/C___
__CC__CCAAGG__AAGGGGGG______
20._GU_154_/C___
__CC__CCAAGG__AAGGGGGG______
21._GU_154_/C___
__CC__CCAAGG__AAGGGGGG______
22._GU_154_/C___
__CC__CCAAGG__AAGGGGGG______
23._GU_154_/C___
__CC__CCAAGG__AAGGGGGG______
24._GU_154_/C___
__CC__CCAAGG__AAGGGGGG______
25._GU_154_/C___
__CC__CCAAGG__AAGGGGGG______
26._GU_154_/C___
__CC__CC__GG__AAGGGGGG______
27._GU_154_/C___
__CC__CCAAGG__AAGGGGGG______
28._GU_154_/C___
GGGGGGGGAAGGGGAAGGCCCCAA____
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
GGCCACAACCCCGGAACGCCTTAACCCC
1._GU_154_/C___
GGCCACAACCCCGGAACGCCTTAACCCC
2._GU_154_/C___
GGCCACAACCCCGGAACGCCTTAACCCC
3._GU_154_/C___
GGCCACAACCCCGGAACGCCTTAACCCC
4._GU_154_/C___
GGCCACAACCCCGGAACGCCTTAACCCC
5._GU_154_/C___
GGCCACAACCCCGGAACGCCTTAACCCC
6._GU_154_/C___
GGCCACAACCCCGGAACGCCTTAACCCC
7._GU_154_/C___
GGCCACAACCCCGGAACGCCTTAACCCC
8._GU_154_/C___
GGCCACAACCCCGGAACGCCTTAACCCC
9._GU_154_/C___
GGCCACAACCCC__AACGCCTTAACCCC
10._GU_154_/C___
GGCCACAACCCCGGAACGCCTTAACCCC
11._GU_154_/C___
GGCCACAACCCCGGAACGCCTTAACCCC
12._GU_154_/C___
GGCCACAACCCCGGAACGCCTTAACCCC
13._GU_154_/C___
__CCACAACCCCGGAACGCCTTAACCCC
14._GU_154_/C___
GGCC__________AACG______CCCC
15._GU_154_/C___
GGCC__________AACG______CCCC
16._GU_154_/C___
GGCC__________AACG______CCCC
17._GU_154_/C___
GGCC__________AACG______CCCC
18._GU_154_/C___
GGCC__________AACG______CCCC
19._GU_154_/C___
GGCC__________AACG______CCCC
20._GU_154_/C___
GGCC__________AACG______CCCC
21._GU_154_/C___
GGCC__________AACG______CCCC
22._GU_154_/C___
GGCC__________AACG______CCCC
23._GU_154_/C___
GGCC__________AACG______CCCC
24._GU_154_/C___
__CC__________AACG______CCCC
25._GU_154_/C___
GGCC__________AACG______CCCC
26._GU_154_/C___
GGCC__________AACG______CCCC
27._GU_154_/C___
GGCC__________AACG______CCCC
28._GU_154_/C___
__GGACAACCCC__AACGGGTTAAGGGG
 85 86 87 88 89 90 91 92 93      
_Input profile
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
1._GU_154_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
2._GU_154_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
3._GU_154_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
4._GU_154_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
5._GU_154_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
6._GU_154_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
7._GU_154_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
8._GU_154_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
9._GU_154_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
10._GU_154_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
11._GU_154_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
12._GU_154_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
13._GU_154_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
14._GU_154_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
15._GU_154_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
16._GU_154_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
17._GU_154_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
18._GU_154_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
19._GU_154_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
20._GU_154_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
21._GU_154_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
22._GU_154_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
23._GU_154_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
24._GU_154_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
25._GU_154_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
26._GU_154_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
27._GU_154_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
28._GU_154_/C___
__GG____GGAAAATTGGX_XX_XX_XX_XX_X

Input profile: GU_154_/C GC-01-078-4-14

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

1._GU_154_/C GC-01-078-4-14

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15 > FP4
 Mars, 2018

2._GU_154_/C GC-01-078-4-14

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

3._GU_154_/C GC-01-078-4-14

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP3
 Mars, 2018

4._GU_154_/C GC-01-078-4-14

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018

5._GU_154_/C GC-01-078-4-14

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

6._GU_154_/C GC-01-078-4-14

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

7._GU_154_/C GC-01-078-4-14

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

8._GU_154_/C GC-01-078-4-14

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

9._GU_154_/C GC-01-078-4-14

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

10._GU_154_/C GC-01-078-4-14

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

11._GU_154_/C GC-01-078-4-14

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

12._GU_154_/C GC-01-078-4-14

identical
90 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

13._GU_154_/C GC-01-078-4-14

identical
89 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

14._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 15 > F
 Dapeng Zhang, 2016

15._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 2
 Dapeng Zhang, 2016

16._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 3
 Dapeng Zhang, 2016

17._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 4
 Dapeng Zhang, 2016

18._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 9
 Dapeng Zhang, 2016

19._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 13
 Dapeng Zhang, 2016

20._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 14
 Dapeng Zhang, 2016

21._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 16
 Dapeng Zhang, 2016

22._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 10 > F
 Dapeng Zhang, 2016

23._GU_154_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 12 > F
 Dapeng Zhang, 2016

24._GU_154_/C

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 5
 Dapeng Zhang, 2016

25._GU_154_/C

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 7
 Dapeng Zhang, 2016

26._GU_154_/C

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 8
 Dapeng Zhang, 2016

27._GU_154_/C

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1414 1 > FP
 Dapeng Zhang, 2016

28._GU_154_/C GC-01-78-4-14

48.1 %
79 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 14, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP534 3TcSNP591 4TcSNP42 5TcSNP418
6TcSNP702 7TcSNP1096 8TcSNP1060 9TcSNP1165 10TcSNP429
11TcSNP75 12TcSNP891 13TcSNP122 14TcSNP316 15TcSNP521
16TcSNP1062 17TcSNP836 18TcSNP878 19TcSNP929 20TcSNP413
21TcSNP653 22TcSNP1149 23TcSNP174 24TcSNP32 25TcSNP372
26TcSNP448 27TcSNP872 28TcSNP953 29TcSNP1034 30TcSNP1175
31TcSNP1111 32TcSNP577 33TcSNP90 34TcSNP998 35TcSNP150
36TcSNP28 37TcSNP751 38TcSNP1484 39TcSNP602 40TcSNP561
41TcSNP894 42TcSNP1063 43TcSNP1126 44TcSNP1270 45TcSNP606
46TcSNP329 47TcSNP689 48TcSNP944 49TcSNP1242 50TcSNP1383
51TcSNP547 52TcSNP776 53TcSNP1309 54TcSNP151 55TcSNP1520
56TcSNP799 57TcSNP899 58TcSNP226 59TcSNP1439 60TcSNP1442
61TcSNP193 62TcSNP25 63TcSNP364 64TcSNP144 65TcSNP230
66TcSNP560 67TcSNP723 68TcSNP731 69TcSNP701 70TcSNP1041
71TcSNP645 72TcSNP917 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240