SNP Profiles of GNV(II)-53   View Data

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 Key

 1234567891011121314
_Input profile
ATACCTACAGGGCTCTCTTTAGCTCTCT
1._GC-08-180-4-23
ATACCTACAGGGCTCTCTTTAGCTCTCT
2._GC-08-181-4-24
ATACCTACAGGGCTCTCTTTAGCTCTCT
3._GC-08-181-4-24
ATACCTACAGGGCTCTCTTTAGCTCTCT
4._GC-08-181-4-24
ATACCTACAGGGCTCTCTTTAGCTCTCT
5._GC-08-181-4-24
ATACCTACAGGGCTCTCTTTAGCTCTCT
6._GC-08-181-4-24
ATACCTACAGGGCTCTCTTTAGCTCTCT
7._GC-08-180-4-23
ATACCTACAGGGCTCTCTTTAGCTCTCT
8._GC-08-180-4-23
ATACCTACAGGGCTCTCTTTAGCTCTCT
9._GC-04-007-1-07
ATACCTACAGGGCTCTCTTTAGCTCTCT
10._GC-04-008-1-08
ATACCTACAGGGCTCTCTTTAGCTCTCT
11._GC-04-008-1-08
ATACCTACAGGGCTCTCTTTAGCTCTCT
12._GC-04-008-1-08
ATACCTACAGGGCTCTCTTTAGCTCTCT
13._GC-04-008-1-08
ATACCTACAGGGCTCTCTTTAGCTCTCT
14._GC-04-008-1-08
ATACCTACAGGGCTCTCTTTAGCTCTCT
15._GC-04-007-1-07
ATACCTACAGGGCTCTCTTTAGCTCTCT
16._GC-04-007-1-07
ATACCTACAGGGCTCTCTTTAGCTCTCT
17._GC-04-007-1-07
ATACCTACAGGGCTCTCTTTAGCTCTCT
18._GC-04-007-1-07
ATACCTACAGGGCTCTCTTTAGCTCTCT
19._GC-04-007-1-07
ATACCTACAGGGCTCTCTTTAGCTCTCT
20._GC-08-181-4-24
ATACCTACAGGGCTCTCTTTAGCTCTCT
21._GC-08-181-4-24
ATACCTACAGGGCTCTCTTTAGCTCTCT
22._GC-08-180-4-23
ATACCTACAGGGCTCTCTTTAGCTCTCT
23._GC-04-007-1-07
ATACCTACAGGGCTCTCTTTAGCTCTCT
24._GC-08-180-4-23
AAACCTACGGAGCTCTCTCTGGTTCCCC
25._GC-08-180-4-23
AAACCTACGGAGCCCCCTCTAGTTCTCT
 1516171819202122232425262728
_Input profile
TTACAAAGCGCGCGCCAGCTAGATATCG
1._GC-08-180-4-23
TTACAAAGCGCGCGCCAGCTAGATATCG
2._GC-08-181-4-24
TTACAAAGCGCGCGCCAGCTAGATATCG
3._GC-08-181-4-24
TTACAAAGCGCGCGCCAGCTAGATATCG
4._GC-08-181-4-24
TTACAAAGCGCGCGCCAGCTAGATATCG
5._GC-08-181-4-24
TTACAAAGCGCGCGCCAGCTAGATATCG
6._GC-08-181-4-24
TTACAAAGCGCGCGCCAGCTAGATATCG
7._GC-08-180-4-23
TTACAAAGCGCGCGCCAGCTAGATATCG
8._GC-08-180-4-23
TTACAAAGCGCGCGCCAGCTAGATATCG
9._GC-04-007-1-07
TTACAAAGCGCGCGCCAGCTAGATATCG
10._GC-04-008-1-08
TTACAAAGCGCGCGCCAGCTAGATATCG
11._GC-04-008-1-08
TTACAAAGCGCGCGCCAGCTAGATATCG
12._GC-04-008-1-08
TTACAAAGCGCGCGCCAGCTAGATATCG
13._GC-04-008-1-08
TTACAAAGCGCGCGCCAGCTAGATATCG
14._GC-04-008-1-08
TTACAAAGCGCGCGCCAGCTAGATATCG
15._GC-04-007-1-07
TTACAAAGCGCGCGCCAGCTAGATATCG
16._GC-04-007-1-07
TTACAAAGCGCGCGCCAGCTAGATATCG
17._GC-04-007-1-07
TTACAAAGCGCGCGCCAGCTAGATATCG
18._GC-04-007-1-07
TTACAAAGCGCGCGCCAGCTAGATATCG
19._GC-04-007-1-07
TTACAAAGCGCGCGCCAGCTAGATATCG
20._GC-08-181-4-24
TTACAAAGCGCGCGCCAGCTAGATATCG
21._GC-08-181-4-24
TTACAAAGCGCGCGCCAGCTAGATATCG
22._GC-08-180-4-23
TTACAAAGCGCGCGCCAGCTAGATATCG
23._GC-04-007-1-07
TTACAAAGCGCGCGCCAGCTAGATATCG
24._GC-08-180-4-23
ATCCAAAGCGCCCGCCAATTGGATATCG
25._GC-08-180-4-23
ATCCAAGGGGGGCGCTAATTGGTTAACC
 2930313233343536373839404142
_Input profile
CCATTTGTAGCGACAAGGGTGTAACCAG
1._GC-08-180-4-23
CCATTTGTAGCGACAAGGGTGTAACCAG
2._GC-08-181-4-24
CCATTTGTAGCGACAAGGGTGTAACCAG
3._GC-08-181-4-24
CCATTTGTAGCGACAAGGGTGTAACCAG
4._GC-08-181-4-24
CCATTTGTAGCGACAAGGGTGTAACCAG
5._GC-08-181-4-24
CCATTTGTAGCGACAAGGGTGTAACCAG
6._GC-08-181-4-24
CCATTTGTAGCGACAAGGGTGTAACCAG
7._GC-08-180-4-23
CCATTTGTAGCGACAAGGGTGTAACCAG
8._GC-08-180-4-23
CCATTTGTAGCGACAAGGGTGTAACCAG
9._GC-04-007-1-07
CCATTTGTAGCGACAAGGGTGTAACCAG
10._GC-04-008-1-08
CCATTTGTAGCGACAAGGGTGTAACCAG
11._GC-04-008-1-08
CCATTTGTAGCGACAAGGGTGTAACCAG
12._GC-04-008-1-08
CCATTTGTAGCGACAAGGGTGTAACCAG
13._GC-04-008-1-08
CCATTTGTAGCGACAAGGGTGTAACCAG
14._GC-04-008-1-08
CCATTTGTAGCGACAAGGGTGTAACCAG
15._GC-04-007-1-07
CCATTTGTAGCGACAAGGGTGTAACCAG
16._GC-04-007-1-07
CCATTTGTAGCGACAAGGGTGTAACCAG
17._GC-04-007-1-07
CCATTTGTAGCGACAAGGGTGTAACCAG
18._GC-04-007-1-07
CCATTTGTAGCGACAAGGGTGTAACCAG
19._GC-04-007-1-07
CCATTTGTAGCGACAAGGGTGTAACCAG
20._GC-08-181-4-24
CCATTTGTAGCGACAAGGGTGTAACCAG
21._GC-08-181-4-24
CCATTTGTAGCGACAAGGGTGTAACC_
22._GC-08-180-4-23
CCATTTGTAGCGACAAGGGTGTAACCAG
23._GC-04-007-1-07
CCATTTGTAGCGACAAGGGTGTAACCAG
24._GC-08-180-4-23
GGAACTGTAACCCCGGTTGGTTAGCTAA
25._GC-08-180-4-23
GGATTTGGAGCCACAGGGGGGTAGCTGG
 4344454647484950515253545556
_Input profile
CCGGATCTGGAGAACTCCAGAGGTCTCT
1._GC-08-180-4-23
CCGGATCTGGAGAACTCCAGAGGTCTCT
2._GC-08-181-4-24
CCGGATCTGGAGAACTCCAGAGGTCTCT
3._GC-08-181-4-24
CCGGATCTGGAGAACTCCAGAGGTCTCT
4._GC-08-181-4-24
CCGGATCTGGAGAACTCCAGAGGTCTCT
5._GC-08-181-4-24
CCGGATCTGGAGAACTCCAGAGGTCTCT
6._GC-08-181-4-24
CCGGATCTGGAGAACTCCAGAGGTCTCT
7._GC-08-180-4-23
CCGGATCTGGAGAACTCCAGAGGTCTCT
8._GC-08-180-4-23
CCGGATCTGGAGAACTCCAGAGGTCTCT
9._GC-04-007-1-07
CCGGATCTGGAGAACTCCAGAGGTCTCT
10._GC-04-008-1-08
CCGGATCTGGAGAACTCCAGAGGTCTCT
11._GC-04-008-1-08
CCGGATCTGGAGAACTCCAGAGGTCTCT
12._GC-04-008-1-08
CCGGATCTGGAGAACTCCAGAGGTCTCT
13._GC-04-008-1-08
CCGGATCTGGAGAACTCCAGAGGTCTCT
14._GC-04-008-1-08
CCGGATCTGGAGAACTCCAGAGGTCTCT
15._GC-04-007-1-07
CCGGATCTGGAGAACTCCAGAGGTCTCT
16._GC-04-007-1-07
CCGGATCTGGAGAACTCCAGAGGTCTCT
17._GC-04-007-1-07
CCGGATCTGGAGAACTCCAGAGGTCTCT
18._GC-04-007-1-07
CCGGATCTGGAGAACTCCAGAGGTCTCT
19._GC-04-007-1-07
CCGGATCTGGAGAACTCCAGAGGTCTCT
20._GC-08-181-4-24
CCGGATCTGGAGAACTCCAGAGGTCTCT
21._GC-08-181-4-24
CCGGATCTGGAGAACTCCAGAGGTCTCT
22._GC-08-180-4-23
CCGGATCTGGAGAACTCCAGAGGTCTCT
23._GC-04-007-1-07
CCGGATCTGGAGAACTCCAGAGGTCTCT
24._GC-08-180-4-23
CCGGTTCTAAAG_CCACAGGGGTCTCT
25._GC-08-180-4-23
CGGTATCTAGAGAGCTCCGGAGTTCCCT
 5758596061626364656667686970
_Input profile
TTAGCGCTCTACGGAGAAAAGTGGAGTT
1._GC-08-180-4-23
TTAGCGCTCTACGGAGAAAAGTGGAGTT
2._GC-08-181-4-24
TTAGCGCTCTACGGAGAAAAGTGGAGTT
3._GC-08-181-4-24
TTAGCGCTCTACGGAGAAAAGTGGAGTT
4._GC-08-181-4-24
TTAGCGCTCTACGGAGAAAAGTGGAGTT
5._GC-08-181-4-24
TTAGCGCTCTACGGAGAAAAGTGGAGTT
6._GC-08-181-4-24
TTAGCGCTCTACGGAGAAAAGTGGAGTT
7._GC-08-180-4-23
TTAGCGCTCTACGGAGAAAAGTGGAGTT
8._GC-08-180-4-23
TTAGCGCTCTACGGAGAAAAGTGGAGTT
9._GC-04-007-1-07
TTAGCGCTCTACGGAGAAAAGTGGAGTT
10._GC-04-008-1-08
TTAGCGCTCTACGGAGAAAAGTGGAGTT
11._GC-04-008-1-08
TTAGCGCTCTACGGAGAAAAGTGGAGTT
12._GC-04-008-1-08
TTAGCGCTCTACGGAGAAAAGTGGAGTT
13._GC-04-008-1-08
TTAGCGCTCTACGGAGAAAAGTGGAGTT
14._GC-04-008-1-08
TTAGCGCTCTACGGAGAAAAGTGGAGTT
15._GC-04-007-1-07
TTAGCGCTCTACGGAGAAAAGTGGAGTT
16._GC-04-007-1-07
TTAGCGCTCTACGGAGAAAAGTGGAGTT
17._GC-04-007-1-07
TTAGCGCTCTACGGAGAAAAGTGGAGTT
18._GC-04-007-1-07
TTAGCGCTCTACGGAGAAAAGTGGAGTT
19._GC-04-007-1-07
TTAGCGCTCTACGGAGAAAAGTGGAGTT
20._GC-08-181-4-24
TTAGCGCTCT_GGAGAAAAGTGGAGTT
21._GC-08-181-4-24
TTAGCGCTCTACGGAGAAAAGTGGAGTT
22._GC-08-180-4-23
TTAGCGCTCTACGGAGAAAAGTGGAGTT
23._GC-04-007-1-07
TTAGCGCTCTACGGAGAAAAGTGGAGTT
24._GC-08-180-4-23
GTAGCC_CTACCGAGACAAGTGGAGCT
25._GC-08-180-4-23
TTGGGGCCCTAAGGAGCCAGGGGTAGTT
 7172737475767778798081828384
_Input profile
CCAGTTCCGGCCACAAACCGCTAACCTT
1._GC-08-180-4-23
CCAGTTCCGGCCACAAACCGCTAACCTT
2._GC-08-181-4-24
CCAGTTCCGGCCACAAACCGCTAACCTT
3._GC-08-181-4-24
CCAGTTCCGGCCACAAACCGCTAACCTT
4._GC-08-181-4-24
CCAGTTCCGGCCACAAACCGCTAACCTT
5._GC-08-181-4-24
CCAGTTCCGGCCACAAACCGCTAACCTT
6._GC-08-181-4-24
CCAGTTCCGGCCACAAACCGCTAACCTT
7._GC-08-180-4-23
CCAGTTCCGGCCACAAACCGCTAACCTT
8._GC-08-180-4-23
CCAGTTCCGGCCACAAACCGCTAACCTT
9._GC-04-007-1-07
CCAGTTCCGGCCACAAACCGCTAACCTT
10._GC-04-008-1-08
CCAGTTCCGGCCACAAACCGCTAACCTT
11._GC-04-008-1-08
CCAGTTCCGGCCACAAACCGCTAACCTT
12._GC-04-008-1-08
CCAGTTCCGGCCACAAACCGCTAACCTT
13._GC-04-008-1-08
CCAGTTCCGGCCACAAACCGCTAACCTT
14._GC-04-008-1-08
CCAGTTCCGGCCACAAACCGCTAACCTT
15._GC-04-007-1-07
CCAGTTCCGGCCACAAACCGCTAACCTT
16._GC-04-007-1-07
CCAGTTCCGGCCACAAACCGCTAACCTT
17._GC-04-007-1-07
CCAGTTCCGGCCACAAACCGCTAACCTT
18._GC-04-007-1-07
CCAGTTCCGGCCACAAACCGCTAACCTT
19._GC-04-007-1-07
CCAGTTCCGGCCACAAACCGCTAACCTT
20._GC-08-181-4-24
CCAGTTCCGGCCACAAACCGCTAACCTT
21._GC-08-181-4-24
CCAGTTCCGGCCACAAACCGCTAACCTT
22._GC-08-180-4-23
_AGTTCCGGCCACAAACCGCTAACCTT
23._GC-04-007-1-07
CCAGTTCCGGCCAC_ACCGCTAACCTT
24._GC-08-180-4-23
CGAGCTCCAGCCAAAGACCGCCTTAACT
25._GC-08-180-4-23
GGAACCCCGGCCCCAAACGGCCAAACCT
 85868788899091929394    
_Input profile
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
1._GC-08-180-4-23
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
2._GC-08-181-4-24
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
3._GC-08-181-4-24
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
4._GC-08-181-4-24
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
5._GC-08-181-4-24
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
6._GC-08-181-4-24
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
7._GC-08-180-4-23
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
8._GC-08-180-4-23
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
9._GC-04-007-1-07
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
10._GC-04-008-1-08
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
11._GC-04-008-1-08
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
12._GC-04-008-1-08
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
13._GC-04-008-1-08
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
14._GC-04-008-1-08
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
15._GC-04-007-1-07
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
16._GC-04-007-1-07
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
17._GC-04-007-1-07
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
18._GC-04-007-1-07
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
19._GC-04-007-1-07
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
20._GC-08-181-4-24
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
21._GC-08-181-4-24
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
22._GC-08-180-4-23
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
23._GC-04-007-1-07
CTCTCTAGCTTTGTCTATGGX_XX_XX_XX_X
24._GC-08-180-4-23
CTCTCTAGCTCTGTCTATGGX_XX_XX_XX_X
25._GC-08-180-4-23
CTCCCCAACTTTGTCTAAAGX_XX_XX_XX_X

Input profile: GNV_II_53 GC-04-008-1-08

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

1._GNV_II_53 GC-08-180-4-23

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

2._GNV_II_53 GC-08-181-4-24

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

3._GNV_II_53 GC-08-181-4-24

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

4._GNV_II_53 GC-08-181-4-24

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

5._GNV_II_53 GC-08-181-4-24

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

6._GNV_II_53 GC-08-181-4-24

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

7._GNV_II_53 GC-08-180-4-23

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

8._GNV_II_53 GC-08-180-4-23

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

9._GNV_II_53 GC-04-007-1-07

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

10._GNV_II_53 GC-04-008-1-08

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

11._GNV_II_53 GC-04-008-1-08

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5 > FP1
 Mars, 2018

12._GNV_II_53 GC-04-008-1-08

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

13._GNV_II_53 GC-04-008-1-08

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

14._GNV_II_53 GC-04-008-1-08

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

15._GNV_II_53 GC-04-007-1-07

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

16._GNV_II_53 GC-04-007-1-07

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

17._GNV_II_53 GC-04-007-1-07

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

18._GNV_II_53 GC-04-007-1-07

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018

19._GNV_II_53 GC-04-007-1-07

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

20._GNV_II_53 GC-08-181-4-24

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

21._GNV_II_53 GC-08-181-4-24

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

22._GNV_II_53 GC-08-180-4-23

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

23._GNV_II_53 GC-04-007-1-07

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

24._GNV_II_53 GC-08-180-4-23

71.2 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

25._GNV_II_53 GC-08-180-4-23

68.6 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP823 84TcSNP619 85TcSNP994
86TcSNP1144 87TcSNP1156 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1253 92TcSNP1414 93TcSNP154 94TcSNP240