SNP Profiles of EET-233   View Data

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 1234567891011121314
_Input profile
AACCCCACGGGGCCCCCCCCGGTTCTTT
1._GC-05-076-2-27
AACCCCACGGGGCCCCCCCCGGTTCTTT
2._GC-05-076-2-27
AACCCCACGGGGCCCCCCCCGGTTCTTT
3._GC-05-076-2-27
AACCCCACGGGGCCCCCCCCGGTTCTTT
4._GC-05-076-2-27
AACCCCACGGGGCCCCCCCCGGTTCTTT
5._GC-05-149-4-02
AACCCCACGGGGCCCCCCCCGGTTCTTT
6._GC-05-149-4-02
_CCCCACGGGGCCCCCCCCGGTTCTTT
7._EET_233_[ECU]
AACCCCAC____CCCCGG_CT_
8._EET_233_[ECU]
AACCCCAC____CCCCGG_CT_
9._EET_233_[ECU]
AACCCCAC____CCCCGG_CT_
10._EET_233_[ECU]
AACCCCAC____CCCCGG_CT_
11._EET_233_[ECU]
AACCCCAC____CCCCGG_CT_
12._EET_233_[ECU]
AACCCCAC____CCCCGG_CT_
13._EET_233_[ECU]
AACCCCAC____CCCCGG_CT_
14._EET_233_[ECU]
AACCCCAC____CCCCGG_CT_
15._EET_233_[ECU]
AACCCCAC____CCCCGG_CT_
16._EET_233_[ECU]
AACCCCAC____CCCCGG_CT_
17._EET_233_[ECU]
AACCCCAC____CCCCGG_CT_
18._EET_233_[ECU]
AACCCCAC____CCCCGG_CT_
19._EET_233_[ECU]
AACCCCAC____CCCCGG_CT_
20._EET_233_[ECU]
AACCCCAC____CCCCGG_CT_
21._EET_233_[ECU]
AACCCCAC____CCCCGG_CT_
22._EET_233_[ECU]
_CCCCAC____CCCCGG_CT_
23._RUQ_1517
__CTCC__TT_CC__TTTT_
24._GC-05-178-4-31
AT_CCCCAGAATTTTCCTTAGTTTTTT
25._GC-05-149-4-02
TT_CTCCAAAATTTTCCTTAGTTTTCT
26._GC-05-085-2-36
TT_CTCCAAAATTTTCCTTAGTTTTCT
27._GC-05-085-2-36
TT_CTCCAAAATTTTCCTTAGTTTTCT
28._GC-05-149-4-02
TT_CTCCAAAATTTTCCTTAGTTTTCT
29._GC-05-178-4-31
TT_CTCCAAAATTTTCCTTAGTTTTCT
30._GC-05-085-2-36
TT_CTCCAAAATTTTCCTTAGTTTTCT
31._GC-05-178-4-31
TT_CTCCAAAATTTTCCTTAGTTTTCT
32._GC-05-178-4-31
TT_CTCCAAAATTTTCCTTAGTTTTCT
33._EET_233_[ECU]
AAAACTCC____CCCTAA_CT_
34._GC-05-085-2-36
TT_CTCCAAAATTTTCCTTAGTTTTCT
35._GC-05-085-2-36
TT_CTCCAAAATTTTCCTTAGTTTTCT
36._EET_233_[ECU]
TT_CTCC____CCTTAG_TT_
37._EET_233_[ECU]
TT_CTCC____CCTTAG_TT_
38._EET_233_[ECU]
TT_CTCC____CCTTAG_TT_
39._EET_233_[ECU]
TT_CTCC____CCTTAG_TT_
40._EET_233_[ECU]
AT_CCCC____CCTTAG_TT_
41._EET_233_[ECU]
TT_CTCC____CCTTAG_TT_
42._EET_233_[ECU]
TT_CTCC____CCTTAG_TT_
43._EET_233_[ECU]
TT_CTCC____CCTTAG_TT_
44._EET_233_[ECU]
TT_CTCC____CCTTAG_TT_
45._EET_233_[ECU]
TT_CTCC____CCTTAG_TT_
46._RUQ_1517
TTCCCTCC____CTTTAG_TT_
47._EET_233_[ECU]
TT_CTCC____CCTTAG_TT_
48._GC-05-149-4-2
AACC_ACGGGG_GGGG_GGAAAGAA
49._GC-05-149-4-2
AACC_ACGGGG_GGGG_GGAAAGAA
50._GC-05-178-4-31
AT__CCAGAA_AAGG_AGAAAAAA
51._RUQ_1517
TTCC_CCAAAA_AAGG_AGAAAAAG
52._GC-05-76-2-27
TT__CCAAAA_AAGG_AGAAAAAG
 1516171819202122232425262728
_Input profile
AAAAGGCGCCGGCTAATTGGTTAACCCC
1._GC-05-076-2-27
AAAAGGCGCCGGCTAATTGGTTAACCCC
2._GC-05-076-2-27
AAAAGGCGCCGGCTAATTGGTTAACCCC
3._GC-05-076-2-27
AAAAGGCGCCGGCTAATTGGTTAACCCC
4._GC-05-076-2-27
AAAAGGCGCCGGCTAA_GGTTAACCCC
5._GC-05-149-4-02
AAAAGGCG_GGCTAATTGGTTAACCCC
6._GC-05-149-4-02
AAAAGGCGCCGGCTAATTGGTTAACCCC
7._EET_233_[ECU]
__GG__GG____TTAA_CC
8._EET_233_[ECU]
__GG__GG____TTAA_CC
9._EET_233_[ECU]
__GG__GG____TTAA_CC
10._EET_233_[ECU]
__GG__GG____TTAA_CC
11._EET_233_[ECU]
__GG__GG____TTAA_CC
12._EET_233_[ECU]
__GG__GG____TTAA_CC
13._EET_233_[ECU]
__GG__GG____TTAA_CC
14._EET_233_[ECU]
__GG__GG____TTAA_CC
15._EET_233_[ECU]
__GG__GG____TTAA_CC
16._EET_233_[ECU]
__GG__GG____TTAA_CC
17._EET_233_[ECU]
__GG__GG____TTAA_CC
18._EET_233_[ECU]
__GG__GG____TTAA_CC
19._EET_233_[ECU]
__GG__GG____TTAA_CC
20._EET_233_[ECU]
__GG__GG____TTAA_CC
21._EET_233_[ECU]
__GG__GG____TTAA_CC
22._EET_233_[ECU]
__GG__GG____TTAA_CC
23._RUQ_1517
____GG____GG_TTCCGG
24._GC-05-178-4-31
ATAAGGCCGGGGCCAATTGGAAATGGCC
25._GC-05-149-4-02
TTAAGGCCGGGGCCAACCGG_TTCCGG
26._GC-05-085-2-36
TTAAGGCCGGGGCCAACCGGAATTCCGG
27._GC-05-085-2-36
TTAAGGCCGGGGCCAACCGGAATTCCGG
28._GC-05-149-4-02
TTAAGGCCGGGGCCAACCGGAATTCCGG
29._GC-05-178-4-31
TTAAGGCCGGGGCCAACCGGAATTCCGG
30._GC-05-085-2-36
TTAAGGCCGGGGCCAACCGGAATTCCGG
31._GC-05-178-4-31
TTAAGGCCGGGGCCAACCGGAATTCCGG
32._GC-05-178-4-31
TTAAGGCCGGGGCCAACCGGAATTCCGG
33._EET_233_[ECU]
__AG__GG____TTAA_GG
34._GC-05-085-2-36
TTAAGGCCGGGGCCAACCGGAATTCCGG
35._GC-05-085-2-36
TTAAGGCCGGGGCCAACCGGAATTCCGG
36._EET_233_[ECU]
__GG__GG_____TT_GG
37._EET_233_[ECU]
__GG__GG____AATT_GG
38._EET_233_[ECU]
__GG__GG____AATT_GG
39._EET_233_[ECU]
__GG__GG____AATT_GG
40._EET_233_[ECU]
__GG__GG____AAAT_CC
41._EET_233_[ECU]
__GG__GG____AATT_GG
42._EET_233_[ECU]
__GG__GG____AATT_GG
43._EET_233_[ECU]
__GG__GG____AATT_GG
44._EET_233_[ECU]
__GG__GG____AATT_GG
45._EET_233_[ECU]
__GG__GG____AATT_GG
46._RUQ_1517
__GG__GG____AATT_GG
47._EET_233_[ECU]
__GG__GG____AATT_GG
48._GC-05-149-4-2
TTAAGGCG_GGAGAAAAGGTTAAGGGG
49._GC-05-149-4-2
TTAAGGCG_GGAGAAAAGGTTAAGGGG
50._GC-05-178-4-31
ATAAGGGG_GGGGAGAAGGAAATCCGG
51._RUQ_1517
AAAAGGGG_GGGGAAGGGGAATTGGCC
52._GC-05-76-2-27
AAAAGGGG_GGGGAAGGGGAATTGGCC
 2930313233343536373839404142
_Input profile
AATTGGGGGGCCAAGTGGTTAGCCGGCC
1._GC-05-076-2-27
AATTGGGGGGCCAAGTGGTTAGCCGGCC
2._GC-05-076-2-27
AATTGGGGGGCCAAGTGGTTAGCCGGCC
3._GC-05-076-2-27
AATTGGGGGGCCAAGTGGTTAGCCGGCC
4._GC-05-076-2-27
AATTGGGGGGCCAAGTGGTTAGCCGGCC
5._GC-05-149-4-02
AATTGGGGGGCCAAGTGGTTAGCCGGCC
6._GC-05-149-4-02
AATTGGGGGGCCAAGTGGTTAGCCGGCC
7._EET_233_[ECU]
AA___GG_AAGT__AG___
8._EET_233_[ECU]
AA___GG_AAGT__AG___
9._EET_233_[ECU]
AA___GG_AAGT__AG___
10._EET_233_[ECU]
AA___GG_AAGT__AG___
11._EET_233_[ECU]
AA___GG_AAGT__AG___
12._EET_233_[ECU]
AA___GG_AAGT__AG___
13._EET_233_[ECU]
AA___GG_AAGT__AG___
14._EET_233_[ECU]
AA___GG_AAGT__AG___
15._EET_233_[ECU]
AA___GG_AAGT__AG___
16._EET_233_[ECU]
AA___GG_AAGT__AG___
17._EET_233_[ECU]
AA___GG_AAGT__AG___
18._EET_233_[ECU]
AA___GG_AAGT__AG___
19._EET_233_[ECU]
AA___GG_AAGT__AG___
20._EET_233_[ECU]
AA___GG_AAGT__AG___
21._EET_233_[ECU]
AA___GG_AAGT__AG___
22._EET_233_[ECU]
AA___GG_AAGT__AG___
23._RUQ_1517
___AGGGACAGGT__GGCT__
24._GC-05-178-4-31
TTTTTTAAGGCCAAGGGTTTAACCGGGG
25._GC-05-149-4-02
ATTTTTAGCGACAGGTGGTTGGCTGGGG
26._GC-05-085-2-36
ATTTTTAGCGACAGGTGGTTGGCTGG_
27._GC-05-085-2-36
ATTTTTAGCGACAGGTGGTTGGCTGGGG
28._GC-05-149-4-02
ATTTTTAGCGACAGGTGGTTGGCTGGGG
29._GC-05-178-4-31
ATTTTTAGCGACAGGTGGTTGGCTGGGG
30._GC-05-085-2-36
ATTTTTAGCGACAGGTGGTTGGCTGGGG
31._GC-05-178-4-31
ATTTTTAGCGACAGGTGGTTGGCTGGGG
32._GC-05-178-4-31
ATTTTTAGCGACAGGTGGTTGGCTGGGG
33._EET_233_[ECU]
AT___CC_AGTT__AG___
34._GC-05-085-2-36
ATTTTTAGCGACAGGTGGTTGGCTGGGG
35._GC-05-085-2-36
ATTTTTAGCGACAGGTGGTTGGCTGGGG
36._EET_233_[ECU]
AT___CG_AGGT__GG___
37._EET_233_[ECU]
AT___CG_AGGT__GG___
38._EET_233_[ECU]
AT___CG_AGGT__GG___
39._EET_233_[ECU]
AT___CG_AGGT__GG___
40._EET_233_[ECU]
TT___GG_AAGG__AA___
41._EET_233_[ECU]
AT___CG_AGGT__GG___
42._EET_233_[ECU]
AT___CG_AGGT__GG___
43._EET_233_[ECU]
AT___CG_AGGT__GG___
44._EET_233_[ECU]
AT___CG_AGGT__GG___
45._EET_233_[ECU]
AT___CG_AGGT__GG___
46._RUQ_1517
AT___CG_AGGT__GG___
47._EET_233_[ECU]
AT___CG_AGGT__GG___
48._GC-05-149-4-2
AAAACCGGCGCCAAAC_AAAGGGGGGG
49._GC-05-149-4-2
AAAACCGGCGCCAAACCCAAAGGGGGGG
50._GC-05-178-4-31
TTAAAAAAGGCCAACCACAAAAGGGGCC
51._RUQ_1517
ATAAAAAGCGACAGACCCAAGGAGGGCC
52._GC-05-76-2-27
ATAAAAAGCGACAGACCCAAGGAGGGCC
 4344454647484950515253545556
_Input profile
GGTTTTGGAAAACCCCGGAGGTTTCTCC
1._GC-05-076-2-27
GGTTTTGGAAAACCCCGGAGGTTTCTCC
2._GC-05-076-2-27
GGTTTTGGAAAACCCCGGAGGTTTCTCC
3._GC-05-076-2-27
GGTTTTGGAAAACCCCGGAGGTTTCTCC
4._GC-05-076-2-27
GGTTTTGGAAAACCCCGGAGGTTTCTCC
5._GC-05-149-4-02
GGTTTTGGAAAACCCCGGAGGTTTCTCC
6._GC-05-149-4-02
GGTTTTGGAAAACCCCGGAGGTTTCTCC
7._EET_233_[ECU]
__TT_________CTCC
8._EET_233_[ECU]
__TT_________CTCC
9._EET_233_[ECU]
__TT_________CTCC
10._EET_233_[ECU]
__TT_________CTCC
11._EET_233_[ECU]
__TT_________CTCC
12._EET_233_[ECU]
__TT_________CTCC
13._EET_233_[ECU]
__TT_________CTCC
14._EET_233_[ECU]
__TT_________CTCC
15._EET_233_[ECU]
__TT_________CTCC
16._EET_233_[ECU]
__TT_________CTCC
17._EET_233_[ECU]
__TT_________CTCC
18._EET_233_[ECU]
__TT_________CTCC
19._EET_233_[ECU]
__TT_________CTCC
20._EET_233_[ECU]
__TT_________CTCC
21._EET_233_[ECU]
__TT_________CTCC
22._EET_233_[ECU]
__TT_________CTCC
23._RUQ_1517
GGTT__AG______TTCT_
24._GC-05-178-4-31
GGTTCTGGAAAGCCCCGGAAGTTTTTCC
25._GC-05-149-4-02
GGTTCTAGAGAACCACGGAGTTTTCTCT
26._GC-05-085-2-36
GGTTCTAGAGAACCACGGAGTTTTCTCT
27._GC-05-085-2-36
GGTTCTAGAGAACC_GGAGTTTTCTCT
28._GC-05-149-4-02
GGTTCTAGAGAACCACGGAGTTTTCTCT
29._GC-05-178-4-31
GGTTCTAGAGAACCACGGAGTTTTCTCT
30._GC-05-085-2-36
GGTTCTAG_AACCACGGAGTTTTCTCT
31._GC-05-178-4-31
GGTTCTAGAGAACCACGGAGTT_CTCT
32._GC-05-178-4-31
GGTTCTAGAGAACCACGGAGTTTTCTCT
33._EET_233_[ECU]
__CT_________TTCT
34._GC-05-085-2-36
GGTTCTAGAGAACCACGG_TTTTCTCT
35._GC-05-085-2-36
GGTTCTAGAGAACCACGGAGTTTTCTCT
36._EET_233_[ECU]
__CT_________CTCT
37._EET_233_[ECU]
__CT_________CTCT
38._EET_233_[ECU]
__CT_________CTCT
39._EET_233_[ECU]
__CT_________CTCT
40._EET_233_[ECU]
__CT_________TTCC
41._EET_233_[ECU]
__CT_________CTCT
42._EET_233_[ECU]
__CT_________CTCT
43._EET_233_[ECU]
__CT_________CTCT
44._EET_233_[ECU]
__CT_________CTCT
45._EET_233_[ECU]
__CT_________CTCT
46._RUQ_1517
__CT_________CTCT
47._EET_233_[ECU]
__CT_________CTCT
48._GC-05-149-4-2
CC_AA_AAAAGG_GGAGACAAAGGG
49._GC-05-149-4-2
CC_AA_AAAAGG_GGAGACAAAGGG
50._GC-05-178-4-31
CC_AG_AAAAGG_GGAAACAGAAGG
51._RUQ_1517
CC_AG_AGAAGG_GGAGAAAAAGAG
52._GC-05-76-2-27
CC_AG_AGAAGG_GGAGAAAAAGAG
 5758596061626364656667686970
_Input profile
TTGGCGCCTTACGGGGCCAGGTGGGGTT
1._GC-05-076-2-27
TTGGCGCCTTACGGGGCCAGGTGGGGTT
2._GC-05-076-2-27
TTGGCGCCTTACGGGGCCAGGTGGGGTT
3._GC-05-076-2-27
TTGGCGCCTTACGGGGCCAGGTGGGGTT
4._GC-05-076-2-27
TTGGCGCCTTACGGGGCCAGGTGGGGTT
5._GC-05-149-4-02
TTGGCGCCTTACGGGGCCAGGTGGGGTT
6._GC-05-149-4-02
TTGGCGCCTTACGGGGCCAGGTGGGGTT
7._EET_233_[ECU]
__CG_TTACGG_CCAGGTGG__
8._EET_233_[ECU]
__CG_TTACGG_CCAGGTGG__
9._EET_233_[ECU]
__CG_TTACGG_CCAGGTGG__
10._EET_233_[ECU]
__CG_TTACGG_CCAGGTGG__
11._EET_233_[ECU]
__CG_TTACGG_CCAGGTGG__
12._EET_233_[ECU]
__CG_TTACGG_CCAGGTGG__
13._EET_233_[ECU]
__CG_TTACGG_CCAGGTGG__
14._EET_233_[ECU]
__CG_TTACGG_CCAGGTGG__
15._EET_233_[ECU]
__CG_TTACGG_CCAGGTGG__
16._EET_233_[ECU]
__CG_TTACGG_CCAGGTGG__
17._EET_233_[ECU]
__CG_TTACGG_CCAGGTGG__
18._EET_233_[ECU]
__CG_TTACGG_CCAGGTGG__
19._EET_233_[ECU]
__CG_TTACGG_CCAGGTGG__
20._EET_233_[ECU]
__CG_TTACGG_CCAGGTGG__
21._EET_233_[ECU]
__CG_TTACGG_CCAGGTGG__
22._EET_233_[ECU]
__CG_TTACGG_CCAGGTGG__
23._RUQ_1517
TT-CCCCCTCC_GGCCAAGTGGAG_
24._GC-05-178-4-31
TTGGCCCCCTCCCGGGCCAAGGGGGGCT
25._GC-05-149-4-02
TTGGCCCCCTCCCCGGCCAAGTGGAGTT
26._GC-05-085-2-36
TTGGCCCCCTCCCCGGCC_GTGGAGTT
27._GC-05-085-2-36
TTGGCCCCCTCCCCGGCCAAGTGGAGTT
28._GC-05-149-4-02
TTGGCCCCCTCCCCGGCCAAGTGGAGTT
29._GC-05-178-4-31
TTGGCCCCCTCCCCGGCCAAGTGGAGTT
30._GC-05-085-2-36
TTGGCCCCCTCCCCGGCCAAGTGGAGTT
31._GC-05-178-4-31
TTGGCCCCCTCCCCGGCCAAGTGGAGTT
32._GC-05-178-4-31
TT_CCCCCTCCCCGGCCAAGTGGAGTT
33._EET_233_[ECU]
__CC_CTACCG_CCGGTTGG__
34._GC-05-085-2-36
TTGGCCCCCTCCCCGGCCAAGTGGAGTT
35._GC-05-085-2-36
TTGGCCCCCTCCCCGG_AAGTGGAGTT
36._EET_233_[ECU]
__CC_CTCCCC_CCAAGTGG__
37._EET_233_[ECU]
__CC_CTCCCC_CC_GTGG__
38._EET_233_[ECU]
__CC_CTCCCC_CCAAGTGG__
39._EET_233_[ECU]
__CC_CTCCCC_CCAAGTGG__
40._EET_233_[ECU]
__CC_CTCCCG_CCAAGGGG__
41._EET_233_[ECU]
__CC_CTCCCC_CCAAGTGG__
42._EET_233_[ECU]
__CC_CTCCCC_CCAAGTGG__
43._EET_233_[ECU]
__CC_CTCCCC_CCAAGTGG__
44._EET_233_[ECU]
__CC_CTCCCC_CCAAGTGG__
45._EET_233_[ECU]
__CC_CTCCCC_CCAAGTGG__
46._RUQ_1517
__CC_CTCCCC_CCAAGTGG__
47._EET_233_[ECU]
__CC_CTCCCC__AAGTGG__
48._GC-05-149-4-2
AAGGCGGGAAACGGGGCCAGACCCGG_
49._GC-05-149-4-2
AAGGCGGGAAACGGGGCCAGACCCGG_
50._GC-05-178-4-31
AAGGGGGGAGCCCGGGCCAACCCCGG_
51._RUQ_1517
AAGGGGGGAGCCCCGGCCAAACCCAG_
52._GC-05-76-2-27
AAGGGGGGAGCCCCGGCCAAACCCAG_
 7172737475767778798081828384
_Input profile
CGAACCAAAAACACAGACGGCCATCCCC
1._GC-05-076-2-27
CGAACCAAAAACACAGACGGCCATCCCC
2._GC-05-076-2-27
CGAACCAAAAACACAGACGGCCATCCCC
3._GC-05-076-2-27
CGAACCAAAAACACAGACGGCCATCCCC
4._GC-05-076-2-27
CGAACCAAAAACACAGACGGCCATCCCC
5._GC-05-149-4-02
CGAACCAAAAACACAGACGGCCATCCCC
6._GC-05-149-4-02
CGAACCAAAAACACAGACGGCC_CCCC
7._EET_233_[ECU]
_AACC_____ACGG___CC
8._EET_233_[ECU]
_AACC_____ACGG___CC
9._EET_233_[ECU]
_AACC_____ACGG___CC
10._EET_233_[ECU]
_AACC_____ACGG___CC
11._EET_233_[ECU]
_AACC_____ACGG___CC
12._EET_233_[ECU]
_AACC_____ACGG___CC
13._EET_233_[ECU]
_AACC_____ACGG___CC
14._EET_233_[ECU]
_AACC_____ACGG___CC
15._EET_233_[ECU]
_AACC_____ACGG___CC
16._EET_233_[ECU]
_AACC_____ACGG___CC
17._EET_233_[ECU]
_AACC_____ACGG___CC
18._EET_233_[ECU]
_AACC_____ACGG___CC
19._EET_233_[ECU]
_AACC_____ACGG___CC
20._EET_233_[ECU]
_AACC_____ACGG___CC
21._EET_233_[ECU]
_AACC_____ACGG___CC
22._EET_233_[ECU]
_AACC_____ACGG___CC
23._RUQ_1517
________ACCC__ACCT
24._GC-05-178-4-31
CCAGTTCCGGCCCCAAACCCCCAACCTT
25._GC-05-149-4-02
CCAACCCCGGAAACAGACCCCCAAACCT
26._GC-05-085-2-36
CCAACCCCGGAAACAGACCCCCAAACCT
27._GC-05-085-2-36
CCAACCCCGGAAACAGACCCCCAAACCT
28._GC-05-149-4-02
CCAACCCCGGAAACAGACCCCCAAACCT
29._GC-05-178-4-31
CCAACCCCGGAAACAGACCCCCAAACCT
30._GC-05-085-2-36
CCAACCCCGGAAACAGACCCCCAA_CT
31._GC-05-178-4-31
CCAACCCCGGAAACAGACCCCCAAACCT
32._GC-05-178-4-31
CCAACCCCGGAAACAGACCCCCAAACCT
33._EET_233_[ECU]
__TT_____ACGG___TT
34._GC-05-085-2-36
CCAACCCCGGAAACAGACCCCCAAACCT
35._GC-05-085-2-36
CCAACCCCGGAAACAGACCCCCAA_CT
36._EET_233_[ECU]
_AACC_____ACCC___CT
37._EET_233_[ECU]
_AACC_____ACCC___CT
38._EET_233_[ECU]
_AACC_____ACCC___CT
39._EET_233_[ECU]
_AACC_____ACCC___CT
40._EET_233_[ECU]
_AGTT_____ACCC___TT
41._EET_233_[ECU]
_AACC_____ACCC___CT
42._EET_233_[ECU]
_AACC_____ACCC___CT
43._EET_233_[ECU]
_AACC_____ACCC___CT
44._EET_233_[ECU]
_AACC_____ACCC___CT
45._EET_233_[ECU]
_AACC_____ACCC___CT
46._RUQ_1517
_AACC_____ACCC___CT
47._EET_233_[ECU]
_AACC_____ACCC___CT
48._GC-05-149-4-2
__GGAAAAACAC_ACCCGGATCCGG
49._GC-05-149-4-2
__GGAAAAACAC_ACCCGGATCCGG
50._GC-05-178-4-31
__AACCGGCCCC_ACGGGGAACCAA
51._RUQ_1517
__GGCCGGAAAC_ACGGGGAAACAG
52._GC-05-76-2-27
__GGCCGGAAAC_ACGGGGAAACAG
 85868788899091929394    
_Input profile
TTCCCTAACCCTGTCTTTGGX_XX_XX_XX_X
1._GC-05-076-2-27
TTCCCTAACCCTGTCTTTGGX_XX_XX_XX_X
2._GC-05-076-2-27
TTCCCTAACCCTGTCTTTGGX_XX_XX_XX_X
3._GC-05-076-2-27
TTCCCTAACCCTGTCTTTGGX_XX_XX_XX_X
4._GC-05-076-2-27
TTCCCTAACCCTGTCTTTGGX_XX_XX_XX_X
5._GC-05-149-4-02
TTCCCTAACCCTGTCTTTGGX_XX_XX_XX_X
6._GC-05-149-4-02
TTCCCTAACCCTGTCTTTGGX_XX_XX_XX_X
7._EET_233_[ECU]
TTCC_AA_CTGTCT__X_XX_XX_XX_X
8._EET_233_[ECU]
TTCC_AA_CTGTCT__X_XX_XX_XX_X
9._EET_233_[ECU]
TTCC_AA_CTGTCT__X_XX_XX_XX_X
10._EET_233_[ECU]
TTCC_AA_CTGTCT__X_XX_XX_XX_X
11._EET_233_[ECU]
TTCC_AA_CTGTCT__X_XX_XX_XX_X
12._EET_233_[ECU]
TTCC_AA_CTGTCT__X_XX_XX_XX_X
13._EET_233_[ECU]
TTCC_AA_CTGTCT__X_XX_XX_XX_X
14._EET_233_[ECU]
TTCC_AA_CTGTCT__X_XX_XX_XX_X
15._EET_233_[ECU]
TTCC_AA_CTGTCT__X_XX_XX_XX_X
16._EET_233_[ECU]
TTCC_AA_CTGTCT__X_XX_XX_XX_X
17._EET_233_[ECU]
TTCC_AA_CTGTCT__X_XX_XX_XX_X
18._EET_233_[ECU]
TTCC_AA_CTGTCT__X_XX_XX_XX_X
19._EET_233_[ECU]
TTCC_AA_CTGTCT__X_XX_XX_XX_X
20._EET_233_[ECU]
TTCC_AA_CTGTCT__X_XX_XX_XX_X
21._EET_233_[ECU]
TTCC_AA_CTGTCT__X_XX_XX_XX_X
22._EET_233_[ECU]
TTCC_AA_CTGTCT__X_XX_XX_XX_X
23._RUQ_1517
___AG-CCGG___X_XX_XX_XX_X
24._GC-05-178-4-31
CTCCCCGGCCCTTTCCTTGGX_XX_XX_XX_X
25._GC-05-149-4-02
TTCCTTAGCTCCGGCCATGGX_XX_XX_XX_X
26._GC-05-085-2-36
TTCCTTAGCTCCGGCC__X_XX_XX_XX_X
27._GC-05-085-2-36
TTCCTTAGCTCCGGCCATGGX_XX_XX_XX_X
28._GC-05-149-4-02
TTCCTTAGCTCCGGCCATGGX_XX_XX_XX_X
29._GC-05-178-4-31
TTCCTTAGCTCCGGCCATGGX_XX_XX_XX_X
30._GC-05-085-2-36
TTCCTTAGCTCCGGCC__X_XX_XX_XX_X
31._GC-05-178-4-31
TTCCTTAGCTCCGGCCATGGX_XX_XX_XX_X
32._GC-05-178-4-31
TTCCTTAGCTCCGGCCATGGX_XX_XX_XX_X
33._EET_233_[ECU]
TTCT_AG_CCGGCT__X_XX_XX_XX_X
34._GC-05-085-2-36
TTCCTTAGCTCC_CC__X_XX_XX_XX_X
35._GC-05-085-2-36
TTCCTTAGCTCCGGCC__X_XX_XX_XX_X
36._EET_233_[ECU]
TTCC_AG_CCGGCC__X_XX_XX_XX_X
37._EET_233_[ECU]
TTCC_AG_CCGGCC__X_XX_XX_XX_X
38._EET_233_[ECU]
TTCC_AG_CC_CC__X_XX_XX_XX_X
39._EET_233_[ECU]
TTCC_AG_CCGGCC__X_XX_XX_XX_X
40._EET_233_[ECU]
CTCC_GG_CTTTCC__X_XX_XX_XX_X
41._EET_233_[ECU]
TTCC_AG_CCGGCC__X_XX_XX_XX_X
42._EET_233_[ECU]
TTCC_AG_CCGGCC__X_XX_XX_XX_X
43._EET_233_[ECU]
TTCC_AG_CCGGCC__X_XX_XX_XX_X
44._EET_233_[ECU]
TTCC_AG_CCGGCC__X_XX_XX_XX_X
45._EET_233_[ECU]
TTCC_AG_CCGGCC__X_XX_XX_XX_X
46._RUQ_1517
TTCC_AG_CCGGCC__X_XX_XX_XX_X
47._EET_233_[ECU]
TTCC_AG_CCGGCC__X_XX_XX_XX_X
48._GC-05-149-4-2
AA_AG__AGACAGAAGGX_XX_XX_XX_X
49._GC-05-149-4-2
AA_AG__AGACAGAAGGX_XX_XX_XX_X
50._GC-05-178-4-31
AG_GG__AGAAGGAAGGX_XX_XX_XX_X
51._RUQ_1517
AA_AA__GGCCGGATGGX_XX_XX_XX_X
52._GC-05-76-2-27
AA_AA__GGCCGGATGGX_XX_XX_XX_X

Input profile: EET_233_[ECU] GC-05-076-2-27

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

1._EET_233_[ECU] GC-05-076-2-27

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

2._EET_233_[ECU] GC-05-076-2-27

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

3._EET_233_[ECU] GC-05-076-2-27

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

4._EET_233_[ECU] GC-05-076-2-27

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

5._EET_233_[ECU] GC-05-149-4-02

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

6._EET_233_[ECU] GC-05-149-4-02

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

7._EET_233_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5227 1 > FP
 Dapeng Zhang, 2016

8._EET_233_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5336 3 > FP
 Dapeng Zhang, 2016

9._EET_233_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5336 1 > FP
 Dapeng Zhang, 2016

10._EET_233_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5336 5
 Dapeng Zhang, 2016

11._EET_233_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5336 4
 Dapeng Zhang, 2016

12._EET_233_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5132 4 > FP
 Dapeng Zhang, 2016

13._EET_233_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5132 1 > FP
 Dapeng Zhang, 2016

14._EET_233_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5132 5
 Dapeng Zhang, 2016

15._EET_233_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5132 3
 Dapeng Zhang, 2016

16._EET_233_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5132 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

17._EET_233_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5402 4
 Dapeng Zhang, 2016

18._EET_233_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5227 5
 Dapeng Zhang, 2016

19._EET_233_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5227 4
 Dapeng Zhang, 2016

20._EET_233_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5227 3
 Dapeng Zhang, 2016

21._EET_233_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5227 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

22._EET_233_[ECU]

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5402 3
 Dapeng Zhang, 2016

23._EET_233_[ECU] RUQ_1517

64.6 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

24._EET_233_[ECU] GC-05-178-4-31

64 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

25._EET_233_[ECU] GC-05-149-4-02

61.4 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

26._EET_233_[ECU] GC-05-085-2-36

61.2 %
89 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 2, Rep: 36, Tree: PL5
Notes: PL5 FP4
 Mars, 2018

27._EET_233_[ECU] GC-05-085-2-36

60.9 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

28._EET_233_[ECU] GC-05-149-4-02

60.8 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

29._EET_233_[ECU] GC-05-178-4-31

60.8 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

30._EET_233_[ECU] GC-05-085-2-36

60.7 %
89 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 2, Rep: 36, Tree: PL2
Notes: PL2 FP2
 Mars, 2018

31._EET_233_[ECU] GC-05-178-4-31

60.3 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP2
 Mars, 2018

32._EET_233_[ECU] GC-05-178-4-31

60.3 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

33._EET_233_[ECU]

60.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5336 2
 Dapeng Zhang, 2016

34._EET_233_[ECU] GC-05-085-2-36

60.1 %
89 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 2, Rep: 36, Tree: PL1
Notes: PL1 FP1
 Mars, 2018

35._EET_233_[ECU] GC-05-085-2-36

60.1 %
89 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 2, Rep: 36, Tree: PL3
Notes: PL3 FP3
 Mars, 2018

36._EET_233_[ECU]

59.2 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5402 2
 Dapeng Zhang, 2016

37._EET_233_[ECU]

57.9 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5236 5 > FP
 Dapeng Zhang, 2016

38._EET_233_[ECU]

57.9 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5236 1 > FP
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

39._EET_233_[ECU]

57.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5236 2 > FP
 Dapeng Zhang, 2016

40._EET_233_[ECU]

57.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5431 1
 Dapeng Zhang, 2016

41._EET_233_[ECU]

57.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5236 4
 Dapeng Zhang, 2016

42._EET_233_[ECU]

57.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5431 3 > FP
 Dapeng Zhang, 2016

43._EET_233_[ECU]

57.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5431 5
 Dapeng Zhang, 2016

44._EET_233_[ECU]

57.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5431 4
 Dapeng Zhang, 2016

45._EET_233_[ECU]

57.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5402 1 > FP
 Dapeng Zhang, 2016

46._EET_233_[ECU] RUQ_1517

57.5 %
40 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

47._EET_233_[ECU]

56.6 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5236 3 > FP
 Dapeng Zhang, 2016

48._EET_233_[ECU] GC-05-149-4-2

51.3 %
79 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 2, Rep: 27, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

49._EET_233_[ECU] GC-05-149-4-2

50.6 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 2, Rep: 27, Tree: 2
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

50._EET_233_[ECU] GC-05-178-4-31

37.3 %
79 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 4, Rep: 31, Tree: 1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

51._EET_233_[ECU] RUQ_1517

36.3 %
80 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

52._EET_233_[ECU] GC-05-76-2-27

35.4 %
79 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 2, Rep: 36, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP823 84TcSNP619 85TcSNP994
86TcSNP1144 87TcSNP1156 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1253 92TcSNP1414 93TcSNP154 94TcSNP240