SNP Profiles of POUND 25 /A   View Data

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 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAAACCCCGGAATTCCCTTTGGTTTTTT
1._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
2._RB_47_[BRA]___
AAAACCCC__________TTGG__TT__
3._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
4._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
5._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
6._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
7._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
8._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
9._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
10._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
11._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
12._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
13._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
14._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
15._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
16._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
17._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
18._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
19._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
20._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTT__TTTTTT
21._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
22._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
23._RB_47_[BRA]___
AAAACCCCGGAACTCCCTTTGGTTTTTT
24._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
25._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
26._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
27._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
28._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
29._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
30._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
31._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
32._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
33._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
34._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
35._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
36._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
37._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
38._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
39._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
40._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
41._RB_47_[BRA]___
AAAACCCC________CTTT____TT__
42._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
43._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
44._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
45._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
46._RB_47_[BRA]___
____CCCC____CC________TTTT__
47._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
48._RB_47_[BRA]___
AAAACCCC________CTCTAG__TT__
49._RB_47_[BRA]___
______CC________CT______TT__
50._RB_47_[BRA]___
AAAA__CCGGAA__GGAG__GGAAAAAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTCCAAGGGGCCCGCCAATTGGAAAAGG
1._RB_47_[BRA]___
______GG____CG________AAAA__
2._RB_47_[BRA]___
______GG____CG________AAAA__
3._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
4._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
5._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
6._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
7._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
8._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
9._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
10._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
11._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
12._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
13._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
14._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
15._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
16._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
17._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
18._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
19._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
20._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
21._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
22._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
23._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
24._RB_47_[BRA]___
______GG____CG________AAAA__
25._RB_47_[BRA]___
______GG____CG________AAAA__
26._RB_47_[BRA]___
______GG____CG________AAAA__
27._RB_47_[BRA]___
______GG____CG________AAAA__
28._RB_47_[BRA]___
______GG____CG________AAAA__
29._RB_47_[BRA]___
______GG____CG________AAAA__
30._RB_47_[BRA]___
______GG____CG________AAAA__
31._RB_47_[BRA]___
______GG____CG________AAAA__
32._RB_47_[BRA]___
______GG____CG________AAAA__
33._RB_47_[BRA]___
______GG____CG________AAAA__
34._RB_47_[BRA]___
______GG____CG________AAAA__
35._RB_47_[BRA]___
______GG____CG________AAAA__
36._RB_47_[BRA]___
______GG____CG________AAAA__
37._RB_47_[BRA]___
______GG____CG________AAAA__
38._RB_47_[BRA]___
______GG____CG________AAAA__
39._RB_47_[BRA]___
______GG____CG________AAAA__
40._RB_47_[BRA]___
______GG____CG________AAAA__
41._RB_47_[BRA]___
______GG____CG________AAAA__
42._RB_47_[BRA]___
______GG____CG________AAAA__
43._RB_47_[BRA]___
______GG____CG________AAAA__
44._RB_47_[BRA]___
______GG____CG________AAAA__
45._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
46._RB_47_[BRA]___
__________CC________GG__AAGG
47._RB_47_[BRA]___
______GG____CG________AAAA__
48._RB_47_[BRA]___
______GG____CG________AAAA__
49._RB_47_[BRA]___
____AA____GG__CC____GG__AAGG
50._RB_47_[BRA]___
AACCAAGGCC__CGGGAAAAGGAAAACC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGATTTGGGGGGCCAAGGGGGGAACCGG
1._RB_47_[BRA]___
GGAT______GG__AAGG____AA____
2._RB_47_[BRA]___
GG________GG____GG__________
3._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
4._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
5._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
6._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
7._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
8._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
9._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
10._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
11._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
12._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
13._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
14._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
15._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
16._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
17._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
18._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
19._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
20._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
21._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGG__AACCGG
22._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGG__AACCGG
23._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
24._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
25._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
26._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
27._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
28._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
29._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
30._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
31._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
32._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
33._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
34._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
35._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
36._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
37._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
38._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
39._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
40._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
41._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
42._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
43._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
44._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
45._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGG__AACCGG
46._RB_47_[BRA]___
GG______GGGGCCAAGG____AACC__
47._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
48._RB_47_[BRA]___
GGAA______GG__AAGG____AG____
49._RB_47_[BRA]___
CC______GGGG________GG__CC__
50._RB_47_[BRA]___
CCAAAACCGGGGCCAACCCCCCAAGGGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
CCGTTTTTAAAGAACCCCGGAAGGTTCC
1._RB_47_[BRA]___
______TT__________________CC
2._RB_47_[BRA]___
______TT__________________CC
3._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
4._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
5._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
6._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
7._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
8._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
9._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
10._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
11._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
12._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
13._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
14._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
15._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
16._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
17._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGG__CC
18._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
19._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTT__
20._RB_47_[BRA]___
CCGTTTTTAAAGAACC__GGAAGGTTCC
21._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
22._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGG__GGTTCC
23._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
24._RB_47_[BRA]___
______TT__________________CC
25._RB_47_[BRA]___
______TT__________________CC
26._RB_47_[BRA]___
______TT__________________CC
27._RB_47_[BRA]___
______TT__________________CC
28._RB_47_[BRA]___
______TT__________________CC
29._RB_47_[BRA]___
______TT__________________CC
30._RB_47_[BRA]___
______TT__________________CC
31._RB_47_[BRA]___
______TT__________________CC
32._RB_47_[BRA]___
______TT__________________CC
33._RB_47_[BRA]___
______TT__________________CC
34._RB_47_[BRA]___
______TT__________________CC
35._RB_47_[BRA]___
______TT__________________CC
36._RB_47_[BRA]___
______TT__________________CC
37._RB_47_[BRA]___
______TT__________________CC
38._RB_47_[BRA]___
______TT__________________CC
39._RB_47_[BRA]___
______TT__________________CC
40._RB_47_[BRA]___
______TT__________________CC
41._RB_47_[BRA]___
______TT__________________CC
42._RB_47_[BRA]___
______TT__________________CC
43._RB_47_[BRA]___
______TT__________________CC
44._RB_47_[BRA]___
______TT____________________
45._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAA__TTCC
46._RB_47_[BRA]___
__GTTT____AG____________CTCC
47._RB_47_[BRA]___
______TT__________________CC
48._RB_47_[BRA]___
______TT__________________CC
49._RB_47_[BRA]___
____TT__AA________________CC
50._RB_47_[BRA]___
GGAC__AA__AGAAGG__GGAACCAGGG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
CCTTGGGGCCCCCCGGGGACAAGGGGAA
1._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
2._RB_47_[BRA]___
__________CCCCGG__ACAA__GG__
3._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
4._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
5._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
6._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
7._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
8._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
9._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
10._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
11._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
12._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
13._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
14._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
15._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
16._RB_47_[BRA]___
CCTTGGGGCCCC__GGGGACAAGGGGAA
17._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
18._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGAC__GGGGAA
19._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
20._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
21._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
22._RB_47_[BRA]___
CCTTGGGGCCCC__GGGGACAAGGGGAA
23._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
24._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
25._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
26._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
27._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
28._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
29._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
30._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
31._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
32._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
33._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
34._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
35._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
36._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
37._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
38._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
39._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
40._RB_47_[BRA]___
CC____GG__CCCCGG__AC__GGGG__
41._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
42._RB_47_[BRA]___
CC____GG__CC__GG__ACAAGGGG__
43._RB_47_[BRA]___
CC____GG__CC__GG__ACAAGGGG__
44._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
45._RB_47_[BRA]___
CCTTGG__CCCCACGGGGACAAGGGGAA
46._RB_47_[BRA]___
__TT__GGCCCCCC__GGACAAGGGGAA
47._RB_47_[BRA]___
CC________CCACGG__ACAAGGGG__
48._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
49._RB_47_[BRA]___
______CCCC__CC__GGACAA______
50._RB_47_[BRA]___
GGAAGGCCGGGGCCGGGGACAACCCCAA
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CCCGAACTCCGGCCACGGACCCCCAAAC
1._RB_47_[BRA]___
____AACT__________ACCC______
2._RB_47_[BRA]___
____AACT__________ACCC______
3._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
4._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
5._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
6._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
7._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
8._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
9._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
10._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
11._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
12._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
13._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
14._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
15._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
16._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
17._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
18._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
19._RB_47_[BRA]___
CCCGAA__CCGGCCACGGACCCCCAAAC
20._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
21._RB_47_[BRA]___
CCCGAACT__GGCCACGGACCCCCAAAC
22._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
23._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
24._RB_47_[BRA]___
____AACT__________ACCC______
25._RB_47_[BRA]___
____AACT__________ACCC______
26._RB_47_[BRA]___
____AACT__________ACCC______
27._RB_47_[BRA]___
____AACT__________ACCC______
28._RB_47_[BRA]___
____AACT__________ACCC______
29._RB_47_[BRA]___
____AACT__________ACCC______
30._RB_47_[BRA]___
____AACT__________ACCC______
31._RB_47_[BRA]___
____AACT__________ACCC______
32._RB_47_[BRA]___
____AACT__________ACCC______
33._RB_47_[BRA]___
____AACT__________ACCC______
34._RB_47_[BRA]___
____AACT__________ACCC______
35._RB_47_[BRA]___
____AACT__________ACCC______
36._RB_47_[BRA]___
____AACT__________ACCC______
37._RB_47_[BRA]___
____AACT__________ACCC______
38._RB_47_[BRA]___
____AACT__________ACCC______
39._RB_47_[BRA]___
____AACT__________ACCC______
40._RB_47_[BRA]___
____AACT__________ACCC______
41._RB_47_[BRA]___
____AACT__________ACCC______
42._RB_47_[BRA]___
____AACT__________ACCC______
43._RB_47_[BRA]___
____AACT__________ACCC______
44._RB_47_[BRA]___
____AA____________ACCC______
45._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
46._RB_47_[BRA]___
__________________ACCC____AC
47._RB_47_[BRA]___
____AACT__________ACCC______
48._RB_47_[BRA]___
____AACT__________ACCC______
49._RB_47_[BRA]___
__CG________________GG______
50._RB_47_[BRA]___
______AGCCGGCCAC__AC__GGAAAC
 85 86 87 88 89 90 91 92 93 94     
_Input profile
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
1._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
2._RB_47_[BRA]___
CCCC______CTGGCC____X_XX_XX_XX_X
3._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
4._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
5._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
6._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
7._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
8._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
9._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
10._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
11._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
12._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
13._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
14._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
15._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
16._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
17._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
18._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
19._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
20._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
21._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
22._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
23._RB_47_[BRA]___
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
24._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
25._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
26._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
27._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
28._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
29._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
30._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
31._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
32._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
33._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
34._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
35._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
36._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
37._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
38._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
39._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
40._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
41._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
42._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
43._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
44._RB_47_[BRA]___
CCCCTTAA__CTGGCC____X_XX_XX_XX_X
45._RB_47_[BRA]___
CCCCTTAACCCTGGCTTTGGX_XX_XX_XX_X
46._RB_47_[BRA]___
CC____AACCCTGG______X_XX_XX_XX_X
47._RB_47_[BRA]___
CCCCTTAA__CTGGCT____X_XX_XX_XX_X
48._RB_47_[BRA]___
CCCCCTAA__CTGGCC____X_XX_XX_XX_X
49._RB_47_[BRA]___
__CC________________X_XX_XX_XX_X
50._RB_47_[BRA]___
GGGG______AGCCGGAAGGX_XX_XX_XX_X

Input profile: RB_47_[BRA] GC-05-101-3-03

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP3
 Mars, 2018

1._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 2 > FP
 Dapeng Zhang, 2016

2._RB_47_[BRA]

identical
31 shared markers

 View  View all  Clone  Any
Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

3._RB_47_[BRA] GC-05-101-3-03

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

4._RB_47_[BRA] GC-05-101-3-03

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

5._RB_47_[BRA] GC-05-101-3-03

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

6._RB_47_[BRA] GC-05-161-4-14

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

7._RB_47_[BRA] GC-05-161-4-14

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

8._RB_47_[BRA] GC-05-161-4-14

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

9._RB_47_[BRA] GC-05-161-4-14

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

10._RB_47_[BRA] GC-05-161-4-14

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

11._RB_47_[BRA] GC-08-065-1-87

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

12._RB_47_[BRA] GC-08-065-1-87

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

13._RB_47_[BRA] GC-08-065-1-87

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

14._RB_47_[BRA] GC-08-065-1-87

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

15._RB_47_[BRA] GC-08-065-1-87

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

16._RB_47_[BRA] GC-08-065-1-87

99.5 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

17._RB_47_[BRA] GC-08-065-1-87

99.5 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

18._RB_47_[BRA] GC-08-065-1-87

99.5 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

19._RB_47_[BRA] GC-05-161-4-14

99.5 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

20._RB_47_[BRA] GC-05-101-3-03

99.5 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

21._RB_47_[BRA] GC-08-065-1-87

99.5 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

22._RB_47_[BRA] GC-08-065-1-87

99.5 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

23._RB_47_[BRA] GC-08-065-1-87

98.9 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

24._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 11
 Dapeng Zhang, 2016

25._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 9
 Dapeng Zhang, 2016

26._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 1
 Dapeng Zhang, 2016

27._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 3
 Dapeng Zhang, 2016

28._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 4
 Dapeng Zhang, 2016

29._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

30._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 3
 Dapeng Zhang, 2016

31._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 4
 Dapeng Zhang, 2016

32._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 5
 Dapeng Zhang, 2016

33._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 1 > FP
 Dapeng Zhang, 2016

34._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 3
 Dapeng Zhang, 2016

35._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 4
 Dapeng Zhang, 2016

36._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 5
 Dapeng Zhang, 2016

37._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 6
 Dapeng Zhang, 2016

38._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 7
 Dapeng Zhang, 2016

39._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 8
 Dapeng Zhang, 2016

40._RB_47_[BRA]

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 10
 Dapeng Zhang, 2016

41._RB_47_[BRA]

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 5
 Dapeng Zhang, 2016

42._RB_47_[BRA]

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 1
 Dapeng Zhang, 2016

43._RB_47_[BRA]

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 2
 Dapeng Zhang, 2016

44._RB_47_[BRA]

98.7 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

45._RB_47_[BRA] GC-08-065-1-87

98.4 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

46._RB_47_[BRA] RUQ_135

96.3 %
41 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

47._RB_47_[BRA]

96.2 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 12
 Dapeng Zhang, 2016

48._RB_47_[BRA] RUQ_135

93.8 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

49._RB_47_[BRA] RUQ_135

84.6 %
26 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

50._RB_47_[BRA] GC-05-101-3-3

50 %
79 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 3, Rep: 3, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP1309
56TcSNP151 57TcSNP1520 58TcSNP799 59TcSNP899 60TcSNP226
61TcSNP1439 62TcSNP1442 63TcSNP193 64TcSNP25 65TcSNP364
66TcSNP144 67TcSNP230 68TcSNP560 69TcSNP723 70TcSNP731
71TcSNP701 72TcSNP1041 73TcSNP645 74TcSNP917 75Tcm003s01336581
76Tcm003s07402719 77Tcm001s00947643 78Tcm006s26664133 79Tcm002s20575712 80TcSNP529
81TcSNP1458 82TcSNP60 83TcSNP430 84TcSNP823 85TcSNP619
86TcSNP994 87TcSNP1144 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1253 92TcSNP1414 93TcSNP154 94TcSNP240