SNP Profiles of RB 47 [BRA]   View Data

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 Key

 1234567891011121314
_Input profile
AAAACCCCGGAATTCCCTTTGGTTTTTT
1._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
2._RB_47_[BRA]
AAAACCCC_____TTGG_TT_
3._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
4._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
5._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
6._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
7._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
8._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
9._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
10._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
11._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
12._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
13._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
14._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
15._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
16._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
17._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
18._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
19._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
20._GC-05-101-3-03
AAAACCCCGGAATTCCCTTT_TTTTTT
21._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
22._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
23._GC-08-065-1-87
AAAACCCCGGAACTCCCTTTGGTTTTTT
24._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
25._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
26._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
27._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
28._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
29._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
30._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
31._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
32._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
33._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
34._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
35._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
36._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
37._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
38._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
39._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
40._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
41._RB_47_[BRA]
AAAACCCC____CTTT__TT_
42._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
43._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
44._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
45._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
46._RUQ_135
__CCCC__CC_-__TTTT_
47._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
48._RUQ_135
AAAACCCC____CTCTAG_TT_
49._RUQ_135
___CC____CT___TT_
50._GC-05-101-3-3
AAAA_CCGGAA_GGAG_GGAAAAAA
 1516171819202122232425262728
_Input profile
TTCCAAGGGGCCCGCCAATTGGAAAAGG
1._RB_47_[BRA]
___GG__CG____AAAA_
2._RB_47_[BRA]
___GG__CG____AAAA_
3._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
4._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
5._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
6._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
7._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
8._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
9._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
10._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
11._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
12._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
13._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
14._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
15._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
16._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
17._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
18._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
19._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
20._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
21._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
22._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
23._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
24._RB_47_[BRA]
___GG__CG____AAAA_
25._RB_47_[BRA]
___GG__CG____AAAA_
26._RB_47_[BRA]
___GG__CG____AAAA_
27._RB_47_[BRA]
___GG__CG____AAAA_
28._RB_47_[BRA]
___GG__CG____AAAA_
29._RB_47_[BRA]
___GG__CG____AAAA_
30._RB_47_[BRA]
___GG__CG____AAAA_
31._RB_47_[BRA]
___GG__CG____AAAA_
32._RB_47_[BRA]
___GG__CG____AAAA_
33._RB_47_[BRA]
___GG__CG____AAAA_
34._RB_47_[BRA]
___GG__CG____AAAA_
35._RB_47_[BRA]
___GG__CG____AAAA_
36._RB_47_[BRA]
___GG__CG____AAAA_
37._RB_47_[BRA]
___GG__CG____AAAA_
38._RB_47_[BRA]
___GG__CG____AAAA_
39._RB_47_[BRA]
___GG__CG____AAAA_
40._RB_47_[BRA]
___GG__CG____AAAA_
41._RB_47_[BRA]
___GG__CG____AAAA_
42._RB_47_[BRA]
___GG__CG____AAAA_
43._RB_47_[BRA]
___GG__CG____AAAA_
44._RB_47_[BRA]
___GG__CG____AAAA_
45._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
46._RUQ_135
_____CC____GG_AAGG
47._RB_47_[BRA]
___GG__CG____AAAA_
48._RUQ_135
___GG__CG____AAAA_
49._RUQ_135
__AA__GG_CC__GG_AAGG
50._GC-05-101-3-3
AACCAAGGCC_CGGGAAAAGGAAAACC
 2930313233343536373839404142
_Input profile
GGATTTGGGGGGCCAAGGGGGGAACCGG
1._RB_47_[BRA]
GGAT___GG_AAGG__AA__
2._RB_47_[BRA]
GG____GG__GG_____
3._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
4._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
5._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
6._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
7._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
8._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
9._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
10._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
11._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
12._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
13._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
14._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
15._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
16._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
17._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
18._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
19._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
20._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
21._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG_AACCGG
22._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG_AACCGG
23._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
24._RB_47_[BRA]
GGAA___GG_AAGG__AA__
25._RB_47_[BRA]
GGAA___GG_AAGG__AA__
26._RB_47_[BRA]
GGAA___GG_AAGG__AA__
27._RB_47_[BRA]
GGAA___GG_AAGG__AA__
28._RB_47_[BRA]
GGAA___GG_AAGG__AA__
29._RB_47_[BRA]
GGAA___GG_AAGG__AA__
30._RB_47_[BRA]
GGAA___GG_AAGG__AA__
31._RB_47_[BRA]
GGAA___GG_AAGG__AA__
32._RB_47_[BRA]
GGAA___GG_AAGG__AA__
33._RB_47_[BRA]
GGAA___GG_AAGG__AA__
34._RB_47_[BRA]
GGAA___GG_AAGG__AA__
35._RB_47_[BRA]
GGAA___GG_AAGG__AA__
36._RB_47_[BRA]
GGAA___GG_AAGG__AA__
37._RB_47_[BRA]
GGAA___GG_AAGG__AA__
38._RB_47_[BRA]
GGAA___GG_AAGG__AA__
39._RB_47_[BRA]
GGAA___GG_AAGG__AA__
40._RB_47_[BRA]
GGAA___GG_AAGG__AA__
41._RB_47_[BRA]
GGAA___GG_AAGG__AA__
42._RB_47_[BRA]
GGAA___GG_AAGG__AA__
43._RB_47_[BRA]
GGAA___GG_AAGG__AA__
44._RB_47_[BRA]
GGAA___GG_AAGG__AA__
45._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG_AACCGG
46._RUQ_135
GG___GGGGCCAAGG__AACC_
47._RB_47_[BRA]
GGAA___GG_AAGG__AA__
48._RUQ_135
GGAA___GG_AAGG__AG__
49._RUQ_135
CC___GGGG____GG_CC_
50._GC-05-101-3-3
CCAAAACCGGGGCCAACCCCCCAAGGGG
 4344454647484950515253545556
_Input profile
CCGTTTTTAAAGAACCCCGGAAGGTTCC
1._RB_47_[BRA]
___TT_________CC
2._RB_47_[BRA]
___TT_________CC
3._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
4._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
5._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
6._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
7._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
8._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
9._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
10._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
11._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
12._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
13._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
14._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
15._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
16._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
17._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGG_CC
18._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
19._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTT_
20._GC-05-101-3-03
CCGTTTTTAAAGAACC_GGAAGGTTCC
21._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
22._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGG_GGTTCC
23._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
24._RB_47_[BRA]
___TT_________CC
25._RB_47_[BRA]
___TT_________CC
26._RB_47_[BRA]
___TT_________CC
27._RB_47_[BRA]
___TT_________CC
28._RB_47_[BRA]
___TT_________CC
29._RB_47_[BRA]
___TT_________CC
30._RB_47_[BRA]
___TT_________CC
31._RB_47_[BRA]
___TT_________CC
32._RB_47_[BRA]
___TT_________CC
33._RB_47_[BRA]
___TT_________CC
34._RB_47_[BRA]
___TT_________CC
35._RB_47_[BRA]
___TT_________CC
36._RB_47_[BRA]
___TT_________CC
37._RB_47_[BRA]
___TT_________CC
38._RB_47_[BRA]
___TT_________CC
39._RB_47_[BRA]
___TT_________CC
40._RB_47_[BRA]
___TT_________CC
41._RB_47_[BRA]
___TT_________CC
42._RB_47_[BRA]
___TT_________CC
43._RB_47_[BRA]
___TT_________CC
44._RB_47_[BRA]
___TT__________
45._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAA_TTCC
46._RUQ_135
_GTTT__AG______CTCC
47._RB_47_[BRA]
___TT_________CC
48._RUQ_135
___TT_________CC
49._RUQ_135
__TT_AA________CC
50._GC-05-101-3-3
GGAC_AA_AGAAGG_GGAACCAGGG
 5758596061626364656667686970
_Input profile
CCTTGGGGCCCCCCGGGGACAAGGGGAA
1._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
2._RB_47_[BRA]
_____CCCCGG_ACAA_GG_
3._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
4._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
5._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
6._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
7._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
8._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
9._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
10._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
11._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
12._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
13._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
14._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
15._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
16._GC-08-065-1-87
CCTTGGGGCCCC_GGGGACAAGGGGAA
17._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
18._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGAC_GGGGAA
19._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
20._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
21._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
22._GC-08-065-1-87
CCTTGGGGCCCC_GGGGACAAGGGGAA
23._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
24._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
25._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
26._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
27._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
28._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
29._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
30._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
31._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
32._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
33._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
34._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
35._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
36._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
37._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
38._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
39._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
40._RB_47_[BRA]
CC__GG_CCCCGG_AC_GGGG_
41._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
42._RB_47_[BRA]
CC__GG_CC_GG_ACAAGGGG_
43._RB_47_[BRA]
CC__GG_CC_GG_ACAAGGGG_
44._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
45._GC-08-065-1-87
CCTTGG_CCCCACGGGGACAAGGGGAA
46._RUQ_135
_TT-GGCCCCCC_GGACAAGGGGAA
47._RB_47_[BRA]
CC____CCACGG_ACAAGGGG_
48._RUQ_135
CC__GG_CCCCGG_ACAAGGGG_
49._RUQ_135
___CCCC_CC_GGACAA___
50._GC-05-101-3-3
GGAAGGCCGGGGCCGGGGACAACCCCAA
 7172737475767778798081828384
_Input profile
CCCGAACTCCGGCCACGGACCCCCAAAC
1._RB_47_[BRA]
__AACT_____ACCC___
2._RB_47_[BRA]
__AACT_____ACCC___
3._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
4._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
5._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
6._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
7._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
8._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
9._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
10._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
11._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
12._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
13._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
14._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
15._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
16._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
17._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
18._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
19._GC-05-161-4-14
CCCGAA_CCGGCCACGGACCCCCAAAC
20._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
21._GC-08-065-1-87
CCCGAACT_GGCCACGGACCCCCAAAC
22._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
23._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
24._RB_47_[BRA]
__AACT_____ACCC___
25._RB_47_[BRA]
__AACT_____ACCC___
26._RB_47_[BRA]
__AACT_____ACCC___
27._RB_47_[BRA]
__AACT_____ACCC___
28._RB_47_[BRA]
__AACT_____ACCC___
29._RB_47_[BRA]
__AACT_____ACCC___
30._RB_47_[BRA]
__AACT_____ACCC___
31._RB_47_[BRA]
__AACT_____ACCC___
32._RB_47_[BRA]
__AACT_____ACCC___
33._RB_47_[BRA]
__AACT_____ACCC___
34._RB_47_[BRA]
__AACT_____ACCC___
35._RB_47_[BRA]
__AACT_____ACCC___
36._RB_47_[BRA]
__AACT_____ACCC___
37._RB_47_[BRA]
__AACT_____ACCC___
38._RB_47_[BRA]
__AACT_____ACCC___
39._RB_47_[BRA]
__AACT_____ACCC___
40._RB_47_[BRA]
__AACT_____ACCC___
41._RB_47_[BRA]
__AACT_____ACCC___
42._RB_47_[BRA]
__AACT_____ACCC___
43._RB_47_[BRA]
__AACT_____ACCC___
44._RB_47_[BRA]
__AA______ACCC___
45._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
46._RUQ_135
_________ACCC__AC
47._RB_47_[BRA]
__AACT_____ACCC___
48._RUQ_135
__AACT_____ACCC___
49._RUQ_135
_CG________GG___
50._GC-05-101-3-3
___AGCCGGCCAC_AC_GGAAAC
 85868788899091929394    
_Input profile
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
1._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
2._RB_47_[BRA]
CCCC___CTGGCC__X_XX_XX_XX_X
3._GC-05-101-3-03
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
4._GC-05-101-3-03
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
5._GC-05-101-3-03
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
6._GC-05-161-4-14
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
7._GC-05-161-4-14
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
8._GC-05-161-4-14
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
9._GC-05-161-4-14
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
10._GC-05-161-4-14
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
11._GC-08-065-1-87
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
12._GC-08-065-1-87
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
13._GC-08-065-1-87
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
14._GC-08-065-1-87
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
15._GC-08-065-1-87
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
16._GC-08-065-1-87
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
17._GC-08-065-1-87
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
18._GC-08-065-1-87
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
19._GC-05-161-4-14
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
20._GC-05-101-3-03
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
21._GC-08-065-1-87
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
22._GC-08-065-1-87
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
23._GC-08-065-1-87
CCCCTTAACCCTGGCCTTGGX_XX_XX_XX_X
24._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
25._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
26._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
27._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
28._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
29._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
30._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
31._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
32._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
33._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
34._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
35._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
36._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
37._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
38._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
39._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
40._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
41._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
42._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
43._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
44._RB_47_[BRA]
CCCCTTAA_CTGGCC__X_XX_XX_XX_X
45._GC-08-065-1-87
CCCCTTAACCCTGGCTTTGGX_XX_XX_XX_X
46._RUQ_135
CC__AACCCTGG___X_XX_XX_XX_X
47._RB_47_[BRA]
CCCCTTAA_CTGGCT__X_XX_XX_XX_X
48._RUQ_135
CCCCCTAA_CTGGCC__X_XX_XX_XX_X
49._RUQ_135
_CC________X_XX_XX_XX_X
50._GC-05-101-3-3
GGGG___AGCCGGAAGGX_XX_XX_XX_X

Input profile: RB_47_[BRA] GC-05-101-3-03

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP3
 Mars, 2018

1._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 2 > FP
 Dapeng Zhang, 2016

2._RB_47_[BRA]

identical
31 shared markers

 View  View all  Clone  Any
Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

3._RB_47_[BRA] GC-05-101-3-03

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

4._RB_47_[BRA] GC-05-101-3-03

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

5._RB_47_[BRA] GC-05-101-3-03

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

6._RB_47_[BRA] GC-05-161-4-14

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

7._RB_47_[BRA] GC-05-161-4-14

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

8._RB_47_[BRA] GC-05-161-4-14

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

9._RB_47_[BRA] GC-05-161-4-14

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

10._RB_47_[BRA] GC-05-161-4-14

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

11._RB_47_[BRA] GC-08-065-1-87

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

12._RB_47_[BRA] GC-08-065-1-87

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

13._RB_47_[BRA] GC-08-065-1-87

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

14._RB_47_[BRA] GC-08-065-1-87

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

15._RB_47_[BRA] GC-08-065-1-87

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

16._RB_47_[BRA] GC-08-065-1-87

99.5 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

17._RB_47_[BRA] GC-08-065-1-87

99.5 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

18._RB_47_[BRA] GC-08-065-1-87

99.5 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

19._RB_47_[BRA] GC-05-161-4-14

99.5 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

20._RB_47_[BRA] GC-05-101-3-03

99.5 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

21._RB_47_[BRA] GC-08-065-1-87

99.5 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

22._RB_47_[BRA] GC-08-065-1-87

99.5 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

23._RB_47_[BRA] GC-08-065-1-87

98.9 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

24._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 11
 Dapeng Zhang, 2016

25._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 9
 Dapeng Zhang, 2016

26._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

27._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 3
 Dapeng Zhang, 2016

28._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 4
 Dapeng Zhang, 2016

29._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

30._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 3
 Dapeng Zhang, 2016

31._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 4
 Dapeng Zhang, 2016

32._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 5
 Dapeng Zhang, 2016

33._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 1 > FP
 Dapeng Zhang, 2016

34._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 3
 Dapeng Zhang, 2016

35._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 4
 Dapeng Zhang, 2016

36._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 5
 Dapeng Zhang, 2016

37._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 6
 Dapeng Zhang, 2016

38._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 7
 Dapeng Zhang, 2016

39._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 8
 Dapeng Zhang, 2016

40._RB_47_[BRA]

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 10
 Dapeng Zhang, 2016

41._RB_47_[BRA]

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 5
 Dapeng Zhang, 2016

42._RB_47_[BRA]

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 1
 Dapeng Zhang, 2016

43._RB_47_[BRA]

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 2
 Dapeng Zhang, 2016

44._RB_47_[BRA]

98.7 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

45._RB_47_[BRA] GC-08-065-1-87

98.4 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

46._RB_47_[BRA] RUQ_135

96.3 %
41 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

47._RB_47_[BRA]

96.2 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 12
 Dapeng Zhang, 2016

48._RB_47_[BRA] RUQ_135

93.8 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

49._RB_47_[BRA] RUQ_135

84.6 %
26 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

50._RB_47_[BRA] GC-05-101-3-3

50 %
79 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 3, Rep: 3, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP1309
56TcSNP151 57TcSNP1520 58TcSNP799 59TcSNP899 60TcSNP226
61TcSNP1439 62TcSNP1442 63TcSNP193 64TcSNP25 65TcSNP364
66TcSNP144 67TcSNP230 68TcSNP560 69TcSNP723 70TcSNP731
71TcSNP701 72TcSNP1041 73TcSNP645 74TcSNP917 75Tcm003s01336581
76Tcm003s07402719 77Tcm001s00947643 78Tcm006s26664133 79Tcm002s20575712 80TcSNP529
81TcSNP1458 82TcSNP60 83TcSNP430 84TcSNP823 85TcSNP619
86TcSNP994 87TcSNP1144 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1253 92TcSNP1414 93TcSNP154 94TcSNP240