SNP Profiles of RB 47   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAAACCCCGGAATTCCCTTTGGTTTTTT
1._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
2._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
3._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
4._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
5._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
6._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
7._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
8._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
9._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
10._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
11._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
12._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
13._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
14._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
15._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
16._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
17._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTT__TTTTTT
18._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
19._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
20._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
21._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
22._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
23._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
24._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
25._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
26._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
27._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
28._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
29._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
30._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
31._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
32._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
33._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
34._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
35._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
36._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
37._RB_47_[BRA]___
AAAACCCC________CTTT____TT__
38._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
39._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
40._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
41._RB_47_[BRA]___
AAAACCCC__________TTGG__TT__
42._RB_47_[BRA]___
AAAACCCCGGAACTCCCTTTGGTTTTTT
43._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
44._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
45._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
46._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
47._RB_47_[BRA]___
____CCCC____CC________TTTT__
48._RB_47_[BRA]___
AAAACCCC________CTCTAG__TT__
49._RB_47_[BRA]___
______CC________CT______TT__
50._RB_47_[BRA]___
AAAA__CCGGAA__GGAG__GGAAAAAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTCCAAGGGGCCCGCCAATTGGAAAAGG
1._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
2._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
3._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
4._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
5._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
6._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
7._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
8._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
9._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
10._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
11._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
12._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
13._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
14._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
15._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
16._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
17._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
18._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
19._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
20._RB_47_[BRA]___
______GG____CG________AAAA__
21._RB_47_[BRA]___
______GG____CG________AAAA__
22._RB_47_[BRA]___
______GG____CG________AAAA__
23._RB_47_[BRA]___
______GG____CG________AAAA__
24._RB_47_[BRA]___
______GG____CG________AAAA__
25._RB_47_[BRA]___
______GG____CG________AAAA__
26._RB_47_[BRA]___
______GG____CG________AAAA__
27._RB_47_[BRA]___
______GG____CG________AAAA__
28._RB_47_[BRA]___
______GG____CG________AAAA__
29._RB_47_[BRA]___
______GG____CG________AAAA__
30._RB_47_[BRA]___
______GG____CG________AAAA__
31._RB_47_[BRA]___
______GG____CG________AAAA__
32._RB_47_[BRA]___
______GG____CG________AAAA__
33._RB_47_[BRA]___
______GG____CG________AAAA__
34._RB_47_[BRA]___
______GG____CG________AAAA__
35._RB_47_[BRA]___
______GG____CG________AAAA__
36._RB_47_[BRA]___
______GG____CG________AAAA__
37._RB_47_[BRA]___
______GG____CG________AAAA__
38._RB_47_[BRA]___
______GG____CG________AAAA__
39._RB_47_[BRA]___
______GG____CG________AAAA__
40._RB_47_[BRA]___
______GG____CG________AAAA__
41._RB_47_[BRA]___
______GG____CG________AAAA__
42._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
43._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
44._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
45._RB_47_[BRA]___
______GG____CG________AAAA__
46._RB_47_[BRA]___
______GG____CG________AAAA__
47._RB_47_[BRA]___
__________CC________GG__AAGG
48._RB_47_[BRA]___
______GG____CG________AAAA__
49._RB_47_[BRA]___
____AA____GG__CC____GG__AAGG
50._RB_47_[BRA]___
AACCAAGGCC__CGGGAAAAGGAAAACC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGAATTGGGGGGCCAAGGGGGGAACCGG
1._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
2._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
3._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
4._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
5._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
6._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
7._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
8._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
9._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
10._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
11._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
12._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
13._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
14._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
15._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
16._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
17._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
18._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGG__AACCGG
19._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGG__AACCGG
20._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
21._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
22._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
23._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
24._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
25._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
26._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
27._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
28._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
29._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
30._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
31._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
32._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
33._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
34._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
35._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
36._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
37._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
38._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
39._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
40._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
41._RB_47_[BRA]___
GG________GG____GG__________
42._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
43._RB_47_[BRA]___
GGATTTGGGGGGCCAAGGGGGGAACCGG
44._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGG__AACCGG
45._RB_47_[BRA]___
GGAT______GG__AAGG____AA____
46._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
47._RB_47_[BRA]___
GG______GGGGCCAAGG____AACC__
48._RB_47_[BRA]___
GGAA______GG__AAGG____AG____
49._RB_47_[BRA]___
CC______GGGG________GG__CC__
50._RB_47_[BRA]___
CCAAAACCGGGGCCAACCCCCCAAGGGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
CCGTTTTTAAAGAACCCCGGAAGGTTCC
1._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
2._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
3._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
4._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
5._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
6._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
7._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
8._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
9._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
10._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
11._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
12._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
13._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
14._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGG__CC
15._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
16._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTT__
17._RB_47_[BRA]___
CCGTTTTTAAAGAACC__GGAAGGTTCC
18._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
19._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGG__GGTTCC
20._RB_47_[BRA]___
______TT__________________CC
21._RB_47_[BRA]___
______TT__________________CC
22._RB_47_[BRA]___
______TT__________________CC
23._RB_47_[BRA]___
______TT__________________CC
24._RB_47_[BRA]___
______TT__________________CC
25._RB_47_[BRA]___
______TT__________________CC
26._RB_47_[BRA]___
______TT__________________CC
27._RB_47_[BRA]___
______TT__________________CC
28._RB_47_[BRA]___
______TT__________________CC
29._RB_47_[BRA]___
______TT__________________CC
30._RB_47_[BRA]___
______TT__________________CC
31._RB_47_[BRA]___
______TT__________________CC
32._RB_47_[BRA]___
______TT__________________CC
33._RB_47_[BRA]___
______TT__________________CC
34._RB_47_[BRA]___
______TT__________________CC
35._RB_47_[BRA]___
______TT__________________CC
36._RB_47_[BRA]___
______TT__________________CC
37._RB_47_[BRA]___
______TT__________________CC
38._RB_47_[BRA]___
______TT__________________CC
39._RB_47_[BRA]___
______TT__________________CC
40._RB_47_[BRA]___
______TT____________________
41._RB_47_[BRA]___
______TT__________________CC
42._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
43._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGTTCC
44._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAA__TTCC
45._RB_47_[BRA]___
______TT__________________CC
46._RB_47_[BRA]___
______TT__________________CC
47._RB_47_[BRA]___
__GTTT____AG____________CTCC
48._RB_47_[BRA]___
______TT__________________CC
49._RB_47_[BRA]___
____TT__AA________________CC
50._RB_47_[BRA]___
GGAC__AA__AGAAGG__GGAACCAGGG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
CCTTGGGGCCCCCCGGGGACAAGGGGAA
1._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
2._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
3._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
4._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
5._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
6._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
7._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
8._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
9._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
10._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
11._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
12._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
13._RB_47_[BRA]___
CCTTGGGGCCCC__GGGGACAAGGGGAA
14._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
15._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGAC__GGGGAA
16._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
17._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
18._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
19._RB_47_[BRA]___
CCTTGGGGCCCC__GGGGACAAGGGGAA
20._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
21._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
22._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
23._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
24._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
25._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
26._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
27._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
28._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
29._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
30._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
31._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
32._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
33._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
34._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
35._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
36._RB_47_[BRA]___
CC____GG__CCCCGG__AC__GGGG__
37._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
38._RB_47_[BRA]___
CC____GG__CC__GG__ACAAGGGG__
39._RB_47_[BRA]___
CC____GG__CC__GG__ACAAGGGG__
40._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
41._RB_47_[BRA]___
__________CCCCGG__ACAA__GG__
42._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
43._RB_47_[BRA]___
CCTTGGGGCCCCCCGGGGACAAGGGGAA
44._RB_47_[BRA]___
CCTTGG__CCCCACGGGGACAAGGGGAA
45._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
46._RB_47_[BRA]___
CC________CCACGG__ACAAGGGG__
47._RB_47_[BRA]___
__TT__GGCCCCCC__GGACAAGGGGAA
48._RB_47_[BRA]___
CC____GG__CCCCGG__ACAAGGGG__
49._RB_47_[BRA]___
______CCCC__CC__GGACAA______
50._RB_47_[BRA]___
GGAAGGCCGGGGCCGGGGACAACCCCAA
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CCCGAACTCCGGCCACGGACCCCCAAAC
1._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
2._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
3._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
4._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
5._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
6._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
7._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
8._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
9._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
10._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
11._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
12._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
13._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
14._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
15._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
16._RB_47_[BRA]___
CCCGAA__CCGGCCACGGACCCCCAAAC
17._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
18._RB_47_[BRA]___
CCCGAACT__GGCCACGGACCCCCAAAC
19._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
20._RB_47_[BRA]___
____AACT__________ACCC______
21._RB_47_[BRA]___
____AACT__________ACCC______
22._RB_47_[BRA]___
____AACT__________ACCC______
23._RB_47_[BRA]___
____AACT__________ACCC______
24._RB_47_[BRA]___
____AACT__________ACCC______
25._RB_47_[BRA]___
____AACT__________ACCC______
26._RB_47_[BRA]___
____AACT__________ACCC______
27._RB_47_[BRA]___
____AACT__________ACCC______
28._RB_47_[BRA]___
____AACT__________ACCC______
29._RB_47_[BRA]___
____AACT__________ACCC______
30._RB_47_[BRA]___
____AACT__________ACCC______
31._RB_47_[BRA]___
____AACT__________ACCC______
32._RB_47_[BRA]___
____AACT__________ACCC______
33._RB_47_[BRA]___
____AACT__________ACCC______
34._RB_47_[BRA]___
____AACT__________ACCC______
35._RB_47_[BRA]___
____AACT__________ACCC______
36._RB_47_[BRA]___
____AACT__________ACCC______
37._RB_47_[BRA]___
____AACT__________ACCC______
38._RB_47_[BRA]___
____AACT__________ACCC______
39._RB_47_[BRA]___
____AACT__________ACCC______
40._RB_47_[BRA]___
____AA____________ACCC______
41._RB_47_[BRA]___
____AACT__________ACCC______
42._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
43._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
44._RB_47_[BRA]___
CCCGAACTCCGGCCACGGACCCCCAAAC
45._RB_47_[BRA]___
____AACT__________ACCC______
46._RB_47_[BRA]___
____AACT__________ACCC______
47._RB_47_[BRA]___
__________________ACCC____AC
48._RB_47_[BRA]___
____AACT__________ACCC______
49._RB_47_[BRA]___
__CG________________GG______
50._RB_47_[BRA]___
______AGCCGGCCAC__AC__GGAAAC
 85 86 87 88 89 90 91 92 93 94 95    
_Input profile
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
1._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
2._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
3._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
4._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
5._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
6._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
7._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
8._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
9._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
10._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
11._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
12._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
13._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
14._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
15._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
16._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
17._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
18._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
19._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
20._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
21._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
22._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
23._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
24._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
25._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
26._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
27._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
28._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
29._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
30._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
31._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
32._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
33._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
34._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
35._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
36._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
37._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
38._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
39._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
40._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
41._RB_47_[BRA]___
CCCC________CTGGCC____X_XX_XX_X
42._RB_47_[BRA]___
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
43._RB_47_[BRA]___
CCCCTT__AACCCTGGCCTTGGX_XX_XX_X
44._RB_47_[BRA]___
CCCCTTTTAACCCTGGCTTTGGX_XX_XX_X
45._RB_47_[BRA]___
CCCCTT__AA__CTGGCC____X_XX_XX_X
46._RB_47_[BRA]___
CCCCTT__AA__CTGGCT____X_XX_XX_X
47._RB_47_[BRA]___
CC______AACCCTGG______X_XX_XX_X
48._RB_47_[BRA]___
CCCCCT__AA__CTGGCC____X_XX_XX_X
49._RB_47_[BRA]___
__CC__________________X_XX_XX_X
50._RB_47_[BRA]___
GGGG__AA____AGCCGGAAGGX_XX_XX_X

Input profile: RB_47_[BRA] GC-05-101-3-03

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

1._RB_47_[BRA] GC-05-101-3-03

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

2._RB_47_[BRA] GC-05-101-3-03

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

3._RB_47_[BRA] GC-05-161-4-14

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

4._RB_47_[BRA] GC-05-161-4-14

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

5._RB_47_[BRA] GC-05-161-4-14

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

6._RB_47_[BRA] GC-05-161-4-14

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

7._RB_47_[BRA] GC-05-161-4-14

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

8._RB_47_[BRA] GC-08-065-1-87

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

9._RB_47_[BRA] GC-08-065-1-87

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

10._RB_47_[BRA] GC-08-065-1-87

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

11._RB_47_[BRA] GC-08-065-1-87

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

12._RB_47_[BRA] GC-08-065-1-87

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

13._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

14._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

15._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

16._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

17._RB_47_[BRA] GC-05-101-3-03

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

18._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

19._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

20._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 11
 Dapeng Zhang, 2016

21._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 9
 Dapeng Zhang, 2016

22._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 1
 Dapeng Zhang, 2016

23._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 3
 Dapeng Zhang, 2016

24._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 4
 Dapeng Zhang, 2016

25._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

26._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 3
 Dapeng Zhang, 2016

27._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 4
 Dapeng Zhang, 2016

28._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 5
 Dapeng Zhang, 2016

29._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 1 > FP
 Dapeng Zhang, 2016

30._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 3
 Dapeng Zhang, 2016

31._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 4
 Dapeng Zhang, 2016

32._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 5
 Dapeng Zhang, 2016

33._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 6
 Dapeng Zhang, 2016

34._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 7
 Dapeng Zhang, 2016

35._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 8
 Dapeng Zhang, 2016

36._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 10
 Dapeng Zhang, 2016

37._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 5
 Dapeng Zhang, 2016

38._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 1
 Dapeng Zhang, 2016

39._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 2
 Dapeng Zhang, 2016

40._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

41._RB_47_[BRA]

identical
31 shared markers

 View  View all  Clone  Any
Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

42._RB_47_[BRA] GC-08-065-1-87

99.5 %
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

43._RB_47_[BRA] GC-05-101-3-03

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP3
 Mars, 2018

44._RB_47_[BRA] GC-08-065-1-87

98.9 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

45._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 2 > FP
 Dapeng Zhang, 2016

46._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 12
 Dapeng Zhang, 2016

47._RB_47_[BRA] RUQ_135

96.3 %
41 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

48._RB_47_[BRA] RUQ_135

95 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

49._RB_47_[BRA] RUQ_135

84.6 %
26 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

50._RB_47_[BRA] GC-05-101-3-3

50 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 3, Rep: 3, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP1309
56TcSNP151 57TcSNP1520 58TcSNP799 59TcSNP899 60TcSNP226
61TcSNP1439 62TcSNP1442 63TcSNP193 64TcSNP25 65TcSNP364
66TcSNP144 67TcSNP230 68TcSNP560 69TcSNP723 70TcSNP731
71TcSNP701 72TcSNP1041 73TcSNP645 74TcSNP917 75Tcm003s01336581
76Tcm003s07402719 77Tcm001s00947643 78Tcm006s26664133 79Tcm002s20575712 80TcSNP529
81TcSNP1458 82TcSNP60 83TcSNP430 84TcSNP823 85TcSNP619
86TcSNP994 87TcSNP1144 88TcSNP1156 89TcSNP469 90TcSNP999
91TcSNP242 92TcSNP1253 93TcSNP1414 94TcSNP154 95TcSNP240