SNP Profiles of RB 47 [BRA]   View Data

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 Key

 1234567891011121314
_Input profile
AAAACCCCGGAATTCCCTTTTTTTTTTT
1._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTTTTTTTTT
2._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTTTTTTTTT
3._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTTTTTTTTT
4._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTTTTTTTTT
5._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTTTTTTTTT
6._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTTTTTTTTT
7._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTTTTTTTTT
8._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTTTTTTTTT
9._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTTTTTTTTT
10._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTTTTTTTTT
11._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTTTTTTTTT
12._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTTTTTTTTT
13._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTTTTTTTTT
14._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTTTTTTTTT
15._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTTTTTTTTT
16._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTTTTTTTTT
17._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTTTTTTTTT
18._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTTTTTTTTT
19._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTTTTTTTTT
20._RB_47_[BRA]
AAAACCCC____CTTT_TT__
21._RB_47_[BRA]
AAAACCCC____CTTT_TT__
22._RB_47_[BRA]
AAAACCCC____CTTT_TT__
23._RB_47_[BRA]
AAAACCCC____CTTT_TT__
24._RB_47_[BRA]
AAAACCCC____CTTT_TT__
25._RB_47_[BRA]
AAAACCCC____CTTT_TT__
26._RB_47_[BRA]
AAAACCCC____CTTT_TT__
27._RB_47_[BRA]
AAAACCCC____CTTT_TT__
28._RB_47_[BRA]
AAAACCCC____CTTT_TT__
29._RB_47_[BRA]
AAAACCCC____CTTT_TT__
30._RB_47_[BRA]
AAAACCCC____CTTT_TT__
31._RB_47_[BRA]
AAAACCCC____CTTT_TT__
32._RB_47_[BRA]
AAAACCCC____CTTT_TT__
33._RB_47_[BRA]
AAAACCCC____CTTT_TT__
34._RB_47_[BRA]
AAAACCCC____CTTT_TT__
35._RB_47_[BRA]
AAAACCCC____CTTT_TT__
36._RB_47_[BRA]
AAAACCCC____CTTT_TT__
37._RB_47_[BRA]
AAAACCCC____CTTT_TT__
38._RB_47_[BRA]
AAAACCCC____CTTT_TT__
39._RB_47_[BRA]
AAAACCCC____CTTT_TT__
40._RB_47_[BRA]
AAAACCCC____CTTT_TT__
41._RB_47_[BRA]
AAAACCCC_____TT_TT__
42._GC-08-065-1-87
AAAACCCCGGAACTCCCTTTTTTTTTTT
43._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTTTTTTTTT
44._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTTTTTTTTT
45._RB_47_[BRA]
AAAACCCC____CTTT_TT__
46._RB_47_[BRA]
AAAACCCC____CTTT_TT__
47._RUQ_135
__CCCC__CC_-_TTTT__
48._RUQ_135
AAAACCCC____CTCT_TT__
49._RUQ_135
___CC____CT__TT__
50._GC-05-101-3-3
AAAA_CCGGAA_GGAG_AAAAAAAA
 1516171819202122232425262728
_Input profile
CCAAGGGGCCCGCCAATTGGAAAAGGGG
1._GC-05-101-3-03
CCAAGGGGCCCGCCAATTGGAAAAGGGG
2._GC-05-101-3-03
CCAAGGGGCCCGCCAATTGGAAAAGGGG
3._GC-05-101-3-03
CCAAGGGGCCCGCCAATTGGAAAAGGGG
4._GC-05-161-4-14
CCAAGGGGCCCGCCAATTGGAAAAGGGG
5._GC-05-161-4-14
CCAAGGGGCCCGCCAATTGGAAAAGGGG
6._GC-05-161-4-14
CCAAGGGGCCCGCCAATTGGAAAAGGGG
7._GC-05-161-4-14
CCAAGGGGCCCGCCAATTGGAAAAGGGG
8._GC-05-161-4-14
CCAAGGGGCCCGCCAATTGGAAAAGGGG
9._GC-08-065-1-87
CCAAGGGGCCCGCCAATTGGAAAAGGGG
10._GC-08-065-1-87
CCAAGGGGCCCGCCAATTGGAAAAGGGG
11._GC-08-065-1-87
CCAAGGGGCCCGCCAATTGGAAAAGGGG
12._GC-08-065-1-87
CCAAGGGGCCCGCCAATTGGAAAAGGGG
13._GC-08-065-1-87
CCAAGGGGCCCGCCAATTGGAAAAGGGG
14._GC-08-065-1-87
CCAAGGGGCCCGCCAATTGGAAAAGGGG
15._GC-08-065-1-87
CCAAGGGGCCCGCCAATTGGAAAAGGGG
16._GC-08-065-1-87
CCAAGGGGCCCGCCAATTGGAAAAGGGG
17._GC-05-161-4-14
CCAAGGGGCCCGCCAATTGGAAAAGGGG
18._GC-08-065-1-87
CCAAGGGGCCCGCCAATTGGAAAAGGGG
19._GC-08-065-1-87
CCAAGGGGCCCGCCAATTGGAAAAGGGG
20._RB_47_[BRA]
__GG__CG____AAAA_GG
21._RB_47_[BRA]
__GG__CG____AAAA_GG
22._RB_47_[BRA]
__GG__CG____AAAA_GG
23._RB_47_[BRA]
__GG__CG____AAAA_GG
24._RB_47_[BRA]
__GG__CG____AAAA_GG
25._RB_47_[BRA]
__GG__CG____AAAA_GG
26._RB_47_[BRA]
__GG__CG____AAAA_GG
27._RB_47_[BRA]
__GG__CG____AAAA_GG
28._RB_47_[BRA]
__GG__CG____AAAA_GG
29._RB_47_[BRA]
__GG__CG____AAAA_GG
30._RB_47_[BRA]
__GG__CG____AAAA_GG
31._RB_47_[BRA]
__GG__CG____AAAA_GG
32._RB_47_[BRA]
__GG__CG____AAAA_GG
33._RB_47_[BRA]
__GG__CG____AAAA_GG
34._RB_47_[BRA]
__GG__CG____AAAA_GG
35._RB_47_[BRA]
__GG__CG____AAAA_GG
36._RB_47_[BRA]
__GG__CG____AAAA_GG
37._RB_47_[BRA]
__GG__CG____AAAA_GG
38._RB_47_[BRA]
__GG__CG____AAAA_GG
39._RB_47_[BRA]
__GG__CG____AAAA_GG
40._RB_47_[BRA]
__GG__CG____AAAA_GG
41._RB_47_[BRA]
__GG__CG____AAAA_GG
42._GC-08-065-1-87
CCAAGGGGCCCGCCAATTGGAAAAGGGG
43._GC-05-101-3-03
CCAAGGGGCCCGCCAATTGGAAAAGGGG
44._GC-08-065-1-87
CCAAGGGGCCCGCCAATTGGAAAAGGGG
45._RB_47_[BRA]
__GG__CG____AAAA_GG
46._RB_47_[BRA]
__GG__CG____AAAA_GG
47._RUQ_135
____CC____GG_AAGGGG
48._RUQ_135
__GG__CG____AAAA_GG
49._RUQ_135
_AA__GG_CC__GG_AAGGCC
50._GC-05-101-3-3
CCAAGGCC_CGGGAAAAGGAAAACCCC
 2930313233343536373839404142
_Input profile
AATTGGGGGGCCAAGGGGGGAACCGGCC
1._GC-05-101-3-03
AATTGGGGGGCCAAGGGGGGAACCGGCC
2._GC-05-101-3-03
AATTGGGGGGCCAAGGGGGGAACCGGCC
3._GC-05-101-3-03
AATTGGGGGGCCAAGGGGGGAACCGGCC
4._GC-05-161-4-14
AATTGGGGGGCCAAGGGGGGAACCGGCC
5._GC-05-161-4-14
AATTGGGGGGCCAAGGGGGGAACCGGCC
6._GC-05-161-4-14
AATTGGGGGGCCAAGGGGGGAACCGGCC
7._GC-05-161-4-14
AATTGGGGGGCCAAGGGGGGAACCGGCC
8._GC-05-161-4-14
AATTGGGGGGCCAAGGGGGGAACCGGCC
9._GC-08-065-1-87
AATTGGGGGGCCAAGGGGGGAACCGGCC
10._GC-08-065-1-87
AATTGGGGGGCCAAGGGGGGAACCGGCC
11._GC-08-065-1-87
AATTGGGGGGCCAAGGGGGGAACCGGCC
12._GC-08-065-1-87
AATTGGGGGGCCAAGGGGGGAACCGGCC
13._GC-08-065-1-87
AATTGGGGGGCCAAGGGGGGAACCGGCC
14._GC-08-065-1-87
AATTGGGGGGCCAAGGGGGGAACCGGCC
15._GC-08-065-1-87
AATTGGGGGGCCAAGGGGGGAACCGGCC
16._GC-08-065-1-87
AATTGGGGGGCCAAGGGGGGAACCGGCC
17._GC-05-161-4-14
AATTGGGGGGCCAAGGGGGGAACCGGCC
18._GC-08-065-1-87
AATTGGGGGGCCAAGGGG_AACCGGCC
19._GC-08-065-1-87
AATTGGGGGGCCAAGGGG_AACCGGCC
20._RB_47_[BRA]
AA___GG_AAGG__AA___
21._RB_47_[BRA]
AA___GG_AAGG__AA___
22._RB_47_[BRA]
AA___GG_AAGG__AA___
23._RB_47_[BRA]
AA___GG_AAGG__AA___
24._RB_47_[BRA]
AA___GG_AAGG__AA___
25._RB_47_[BRA]
AA___GG_AAGG__AA___
26._RB_47_[BRA]
AA___GG_AAGG__AA___
27._RB_47_[BRA]
AA___GG_AAGG__AA___
28._RB_47_[BRA]
AA___GG_AAGG__AA___
29._RB_47_[BRA]
AA___GG_AAGG__AA___
30._RB_47_[BRA]
AA___GG_AAGG__AA___
31._RB_47_[BRA]
AA___GG_AAGG__AA___
32._RB_47_[BRA]
AA___GG_AAGG__AA___
33._RB_47_[BRA]
AA___GG_AAGG__AA___
34._RB_47_[BRA]
AA___GG_AAGG__AA___
35._RB_47_[BRA]
AA___GG_AAGG__AA___
36._RB_47_[BRA]
AA___GG_AAGG__AA___
37._RB_47_[BRA]
AA___GG_AAGG__AA___
38._RB_47_[BRA]
AA___GG_AAGG__AA___
39._RB_47_[BRA]
AA___GG_AAGG__AA___
40._RB_47_[BRA]
AA___GG_AAGG__AA___
41._RB_47_[BRA]
____GG__GG______
42._GC-08-065-1-87
AATTGGGGGGCCAAGGGGGGAACCGGCC
43._GC-05-101-3-03
ATTTGGGGGGCCAAGGGGGGAACCGGCC
44._GC-08-065-1-87
AATTGGGGGGCCAAGGGG_AACCGGCC
45._RB_47_[BRA]
AT___GG_AAGG__AA___
46._RB_47_[BRA]
AA___GG_AAGG__AA___
47._RUQ_135
___GGGGCCAAGG__AACC__
48._RUQ_135
AA___GG_AAGG__AG___
49._RUQ_135
___GGGG____GG_CC__
50._GC-05-101-3-3
AAAACCGGGGCCAACCCCCCAAGGGGGG
 4344454647484950515253545556
_Input profile
GTTTTTAAAGAACCGGAAGGTTCCCCTT
1._GC-05-101-3-03
GTTTTTAAAGAACCGGAAGGTTCCCCTT
2._GC-05-101-3-03
GTTTTTAAAGAACCGGAAGGTTCCCCTT
3._GC-05-101-3-03
GTTTTTAAAGAACCGGAAGGTTCCCCTT
4._GC-05-161-4-14
GTTTTTAAAGAACCGGAAGGTTCCCCTT
5._GC-05-161-4-14
GTTTTTAAAGAACCGGAAGGTTCCCCTT
6._GC-05-161-4-14
GTTTTTAAAGAACCGGAAGGTTCCCCTT
7._GC-05-161-4-14
GTTTTTAAAGAACCGGAAGGTTCCCCTT
8._GC-05-161-4-14
GTTTTTAAAGAACCGGAAGGTTCCCCTT
9._GC-08-065-1-87
GTTTTTAAAGAACCGGAAGGTTCCCCTT
10._GC-08-065-1-87
GTTTTTAAAGAACCGGAAGGTTCCCCTT
11._GC-08-065-1-87
GTTTTTAAAGAACCGGAAGGTTCCCCTT
12._GC-08-065-1-87
GTTTTTAAAGAACCGGAAGGTTCCCCTT
13._GC-08-065-1-87
GTTTTTAAAGAACCGGAAGGTTCCCCTT
14._GC-08-065-1-87
GTTTTTAAAGAACCGGAAGGTTCCCCTT
15._GC-08-065-1-87
GTTTTTAAAGAACCGGAAGG_CCCCTT
16._GC-08-065-1-87
GTTTTTAAAGAACCGGAAGGTTCCCCTT
17._GC-05-161-4-14
GTTTTTAAAGAACCGGAAGGTT_CCTT
18._GC-08-065-1-87
GTTTTTAAAGAACCGGAAGGTTCCCCTT
19._GC-08-065-1-87
GTTTTTAAAGAACCGG_GGTTCCCCTT
20._RB_47_[BRA]
__TT________CCCC_
21._RB_47_[BRA]
__TT________CCCC_
22._RB_47_[BRA]
__TT________CCCC_
23._RB_47_[BRA]
__TT________CCCC_
24._RB_47_[BRA]
__TT________CCCC_
25._RB_47_[BRA]
__TT________CCCC_
26._RB_47_[BRA]
__TT________CCCC_
27._RB_47_[BRA]
__TT________CCCC_
28._RB_47_[BRA]
__TT________CCCC_
29._RB_47_[BRA]
__TT________CCCC_
30._RB_47_[BRA]
__TT________CCCC_
31._RB_47_[BRA]
__TT________CCCC_
32._RB_47_[BRA]
__TT________CCCC_
33._RB_47_[BRA]
__TT________CCCC_
34._RB_47_[BRA]
__TT________CCCC_
35._RB_47_[BRA]
__TT________CCCC_
36._RB_47_[BRA]
__TT________CCCC_
37._RB_47_[BRA]
__TT________CCCC_
38._RB_47_[BRA]
__TT________CCCC_
39._RB_47_[BRA]
__TT________CCCC_
40._RB_47_[BRA]
__TT_________CC_
41._RB_47_[BRA]
__TT________CC__
42._GC-08-065-1-87
GTTTTTAAAGAACCGGAAGGTTCCCCTT
43._GC-05-101-3-03
GTTTTTAAAGAACCGGAAGGTTCCCCTT
44._GC-08-065-1-87
GTTTTTAAAGAACCGGAA_TTCCCCTT
45._RB_47_[BRA]
__TT________CCCC_
46._RB_47_[BRA]
__TT________CCCC_
47._RUQ_135
GTTT__AG_____CTCC_TT
48._RUQ_135
__TT________CCCC_
49._RUQ_135
_TT_AA_______CC__
50._GC-05-101-3-3
AC_AA_AGAAGGGGAACCAGGGGGAA
 5758596061626364656667686970
_Input profile
GGGGCCCCCCGGGGACAAGGGGAACCCG
1._GC-05-101-3-03
GGGGCCCCCCGGGGACAAGGGGAACCCG
2._GC-05-101-3-03
GGGGCCCCCCGGGGACAAGGGGAACCCG
3._GC-05-101-3-03
GGGGCCCCCCGGGGACAAGGGGAACCCG
4._GC-05-161-4-14
GGGGCCCCCCGGGGACAAGGGGAACCCG
5._GC-05-161-4-14
GGGGCCCCCCGGGGACAAGGGGAACCCG
6._GC-05-161-4-14
GGGGCCCCCCGGGGACAAGGGGAACCCG
7._GC-05-161-4-14
GGGGCCCCCCGGGGACAAGGGGAACCCG
8._GC-05-161-4-14
GGGGCCCCCCGGGGACAAGGGGAACCCG
9._GC-08-065-1-87
GGGGCCCCCCGGGGACAAGGGGAACCCG
10._GC-08-065-1-87
GGGGCCCCCCGGGGACAAGGGGAACCCG
11._GC-08-065-1-87
GGGGCCCCCCGGGGACAAGGGGAACCCG
12._GC-08-065-1-87
GGGGCCCCCCGGGGACAAGGGGAACCCG
13._GC-08-065-1-87
GGGGCCCCCCGGGGACAAGGGGAACCCG
14._GC-08-065-1-87
GGGGCCCC_GGGGACAAGGGGAACCCG
15._GC-08-065-1-87
GGGGCCCCCCGGGGACAAGGGGAACCCG
16._GC-08-065-1-87
GGGGCCCCCCGGGGAC_GGGGAACCCG
17._GC-05-161-4-14
GGGGCCCCCCGGGGACAAGGGGAACCCG
18._GC-08-065-1-87
GGGGCCCCCCGGGGACAAGGGGAACCCG
19._GC-08-065-1-87
GGGGCCCC_GGGGACAAGGGGAACCCG
20._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
21._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
22._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
23._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
24._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
25._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
26._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
27._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
28._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
29._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
30._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
31._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
32._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
33._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
34._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
35._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
36._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
37._RB_47_[BRA]
_GG_CCCCGG_AC_GGGG___
38._RB_47_[BRA]
_GG_CC_GG_ACAAGGGG___
39._RB_47_[BRA]
_GG_CC_GG_ACAAGGGG___
40._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
41._RB_47_[BRA]
___CCCCGG_ACAA_GG___
42._GC-08-065-1-87
GGGGCCCCCCGGGGACAAGGGGAACCCG
43._GC-05-101-3-03
GGGGCCCCCCGGGGACAAGGGGAACCCG
44._GC-08-065-1-87
GG_CCCCACGGGGACAAGGGGAACCCG
45._RB_47_[BRA]
_GG_CCCCGG_ACAAGGGG___
46._RB_47_[BRA]
___CCACGG_ACAAGGGG___
47._RUQ_135
-GGCCCCCC_GGACAAGGGGAA__
48._RUQ_135
_GG_CCCCGG_ACAAGGGG___
49._RUQ_135
_CCCC_CC_GGACAA____CG
50._GC-05-101-3-3
GGCCGGGGCCGGGGACAACCCCAA__
 7172737475767778798081828384
_Input profile
AACTCCGGCCACGGACCCCCAAACCCCC
1._GC-05-101-3-03
AACTCCGGCCACGGACCCCCAAACCCCC
2._GC-05-101-3-03
AACTCCGGCCACGGACCCCCAAACCCCC
3._GC-05-101-3-03
AACTCCGGCCACGGACCCCCAAACCCCC
4._GC-05-161-4-14
AACTCCGGCCACGGACCCCCAAACCCCC
5._GC-05-161-4-14
AACTCCGGCCACGGACCCCCAAACCCCC
6._GC-05-161-4-14
AACTCCGGCCACGGACCCCCAAACCCCC
7._GC-05-161-4-14
AACTCCGGCCACGGACCCCCAAACCCCC
8._GC-05-161-4-14
AACTCCGGCCACGGACCCCCAAACCCCC
9._GC-08-065-1-87
AACTCCGGCCACGGACCCCCAAACCCCC
10._GC-08-065-1-87
AACTCCGGCCACGGACCCCCAAACCCCC
11._GC-08-065-1-87
AACTCCGGCCACGGACCCCCAAACCCCC
12._GC-08-065-1-87
AACTCCGGCCACGGACCCCCAAACCCCC
13._GC-08-065-1-87
AACTCCGGCCACGGACCCCCAAACCCCC
14._GC-08-065-1-87
AACTCCGGCCACGGACCCCCAAACCCCC
15._GC-08-065-1-87
AACTCCGGCCACGGACCCCCAAACCCCC
16._GC-08-065-1-87
AACTCCGGCCACGGACCCCCAAACCCCC
17._GC-05-161-4-14
AA_CCGGCCACGGACCCCCAAACCCCC
18._GC-08-065-1-87
AACT_GGCCACGGACCCCCAAACCCCC
19._GC-08-065-1-87
AACTCCGGCCACGGACCCCCAAACCCCC
20._RB_47_[BRA]
AACT_____ACCC___CCCC
21._RB_47_[BRA]
AACT_____ACCC___CCCC
22._RB_47_[BRA]
AACT_____ACCC___CCCC
23._RB_47_[BRA]
AACT_____ACCC___CCCC
24._RB_47_[BRA]
AACT_____ACCC___CCCC
25._RB_47_[BRA]
AACT_____ACCC___CCCC
26._RB_47_[BRA]
AACT_____ACCC___CCCC
27._RB_47_[BRA]
AACT_____ACCC___CCCC
28._RB_47_[BRA]
AACT_____ACCC___CCCC
29._RB_47_[BRA]
AACT_____ACCC___CCCC
30._RB_47_[BRA]
AACT_____ACCC___CCCC
31._RB_47_[BRA]
AACT_____ACCC___CCCC
32._RB_47_[BRA]
AACT_____ACCC___CCCC
33._RB_47_[BRA]
AACT_____ACCC___CCCC
34._RB_47_[BRA]
AACT_____ACCC___CCCC
35._RB_47_[BRA]
AACT_____ACCC___CCCC
36._RB_47_[BRA]
AACT_____ACCC___CCCC
37._RB_47_[BRA]
AACT_____ACCC___CCCC
38._RB_47_[BRA]
AACT_____ACCC___CCCC
39._RB_47_[BRA]
AACT_____ACCC___CCCC
40._RB_47_[BRA]
AA______ACCC___CCCC
41._RB_47_[BRA]
AACT_____ACCC___CCCC
42._GC-08-065-1-87
AACTCCGGCCACGGACCCCCAAACCCCC
43._GC-05-101-3-03
AACTCCGGCCACGGACCCCCAAACCCCC
44._GC-08-065-1-87
AACTCCGGCCACGGACCCCCAAACCCCC
45._RB_47_[BRA]
AACT_____ACCC___CCCC
46._RB_47_[BRA]
AACT_____ACCC___CCCC
47._RUQ_135
_______ACCC__ACCC_
48._RUQ_135
AACT_____ACCC___CCCC
49._RUQ_135
________GG____CC
50._GC-05-101-3-3
_AGCCGGCCAC_AC_GGAAACGGGG
 858687888990919293     
_Input profile
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
1._GC-05-101-3-03
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
2._GC-05-101-3-03
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
3._GC-05-101-3-03
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
4._GC-05-161-4-14
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
5._GC-05-161-4-14
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
6._GC-05-161-4-14
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
7._GC-05-161-4-14
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
8._GC-05-161-4-14
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
9._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
10._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
11._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
12._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
13._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
14._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
15._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
16._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
17._GC-05-161-4-14
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
18._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
19._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
20._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
21._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
22._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
23._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
24._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
25._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
26._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
27._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
28._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
29._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
30._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
31._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
32._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
33._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
34._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
35._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
36._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
37._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
38._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
39._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
40._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
41._RB_47_[BRA]
____CTGGCC__X_XX_XX_XX_XX_X
42._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
43._GC-05-101-3-03
TT_AACCCTGGCCTTGGX_XX_XX_XX_XX_X
44._GC-08-065-1-87
TTTTAACCCTGGCTTTGGX_XX_XX_XX_XX_X
45._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
46._RB_47_[BRA]
TT_AA_CTGGCT__X_XX_XX_XX_XX_X
47._RUQ_135
__AACCCTGG___X_XX_XX_XX_XX_X
48._RUQ_135
CT_AA_CTGGCC__X_XX_XX_XX_XX_X
49._RUQ_135
_________X_XX_XX_XX_XX_X
50._GC-05-101-3-3
_AA__AGCCGGAAGGX_XX_XX_XX_XX_X

Input profile: RB_47_[BRA] GC-05-101-3-03

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

1._RB_47_[BRA] GC-05-101-3-03

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

2._RB_47_[BRA] GC-05-101-3-03

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

3._RB_47_[BRA] GC-05-101-3-03

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

4._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

5._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

6._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

7._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

8._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

9._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

10._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

11._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

12._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

13._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

14._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

15._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

16._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

17._RB_47_[BRA] GC-05-161-4-14

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

18._RB_47_[BRA] GC-08-065-1-87

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

19._RB_47_[BRA] GC-08-065-1-87

identical
90 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

20._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 11
 Dapeng Zhang, 2016

21._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 9
 Dapeng Zhang, 2016

22._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

23._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 3
 Dapeng Zhang, 2016

24._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 4
 Dapeng Zhang, 2016

25._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 5
 Dapeng Zhang, 2016

26._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

27._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 3
 Dapeng Zhang, 2016

28._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 4
 Dapeng Zhang, 2016

29._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 5
 Dapeng Zhang, 2016

30._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 1 > FP
 Dapeng Zhang, 2016

31._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 3
 Dapeng Zhang, 2016

32._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 4
 Dapeng Zhang, 2016

33._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 5
 Dapeng Zhang, 2016

34._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 6
 Dapeng Zhang, 2016

35._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 7
 Dapeng Zhang, 2016

36._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 8
 Dapeng Zhang, 2016

37._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 10
 Dapeng Zhang, 2016

38._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 1
 Dapeng Zhang, 2016

39._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 2
 Dapeng Zhang, 2016

40._RB_47_[BRA]

identical
37 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

41._RB_47_[BRA]

identical
30 shared markers

 View  View all  Clone  Any
Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

42._RB_47_[BRA] GC-08-065-1-87

99.5 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

43._RB_47_[BRA] GC-05-101-3-03

99.5 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP3
 Mars, 2018

44._RB_47_[BRA] GC-08-065-1-87

98.9 %
90 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

45._RB_47_[BRA]

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 2 > FP
 Dapeng Zhang, 2016

46._RB_47_[BRA]

97.4 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 12
 Dapeng Zhang, 2016

47._RB_47_[BRA] RUQ_135

96.3 %
41 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

48._RB_47_[BRA] RUQ_135

96.2 %
39 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

49._RB_47_[BRA] RUQ_135

84.6 %
26 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

50._RB_47_[BRA] GC-05-101-3-3

49.4 %
79 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 3, Rep: 3, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP75 12TcSNP891 13TcSNP122 14TcSNP316 15TcSNP521
16TcSNP860 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1383
51TcSNP547 52TcSNP776 53TcSNP1309 54TcSNP151 55TcSNP1520
56TcSNP799 57TcSNP899 58TcSNP226 59TcSNP1439 60TcSNP1442
61TcSNP193 62TcSNP25 63TcSNP364 64TcSNP144 65TcSNP230
66TcSNP560 67TcSNP723 68TcSNP731 69TcSNP701 70TcSNP1041
71TcSNP645 72TcSNP917 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240