SNP Profiles of RB-47   View Data

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 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAAACCCCGGAATTCCCTTTGGTTTTTT
1._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
2._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
3._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
4._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
5._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
6._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
7._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
8._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
9._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
10._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
11._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
12._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
13._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
14._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
15._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
16._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
17._GC-05-101-3-03
AAAACCCCGGAATTCCCTTT__TTTTTT
18._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
19._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
20._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
21._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
22._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
23._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
24._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
25._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
26._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
27._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
28._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
29._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
30._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
31._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
32._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
33._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
34._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
35._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
36._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
37._RB_47_[BRA]
AAAACCCC________CTTT____TT__
38._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
39._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
40._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
41._RB_47_[BRA]
AAAACCCC__________TTGG__TT__
42._GC-08-065-1-87
AAAACCCCGGAACTCCCTTTGGTTTTTT
43._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
44._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
45._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
46._RB_47_[BRA]
AAAACCCC________CTTTGG__TT__
47._RUQ_135
____CCCC____CC________TTTT__
48._RUQ_135
AAAACCCC________CTCTAG__TT__
49._RUQ_135
______CC________CT______TT__
50._GC-05-101-3-3
AAAA__CCGGAA__GGAG__GGAAAAAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTCCAAGGGGCCCGCCAATTGGAAAAGG
1._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
2._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
3._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
4._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
5._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
6._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
7._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
8._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
9._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
10._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
11._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
12._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
13._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
14._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
15._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
16._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
17._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
18._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
19._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
20._RB_47_[BRA]
______GG____CG________AAAA__
21._RB_47_[BRA]
______GG____CG________AAAA__
22._RB_47_[BRA]
______GG____CG________AAAA__
23._RB_47_[BRA]
______GG____CG________AAAA__
24._RB_47_[BRA]
______GG____CG________AAAA__
25._RB_47_[BRA]
______GG____CG________AAAA__
26._RB_47_[BRA]
______GG____CG________AAAA__
27._RB_47_[BRA]
______GG____CG________AAAA__
28._RB_47_[BRA]
______GG____CG________AAAA__
29._RB_47_[BRA]
______GG____CG________AAAA__
30._RB_47_[BRA]
______GG____CG________AAAA__
31._RB_47_[BRA]
______GG____CG________AAAA__
32._RB_47_[BRA]
______GG____CG________AAAA__
33._RB_47_[BRA]
______GG____CG________AAAA__
34._RB_47_[BRA]
______GG____CG________AAAA__
35._RB_47_[BRA]
______GG____CG________AAAA__
36._RB_47_[BRA]
______GG____CG________AAAA__
37._RB_47_[BRA]
______GG____CG________AAAA__
38._RB_47_[BRA]
______GG____CG________AAAA__
39._RB_47_[BRA]
______GG____CG________AAAA__
40._RB_47_[BRA]
______GG____CG________AAAA__
41._RB_47_[BRA]
______GG____CG________AAAA__
42._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
43._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
44._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
45._RB_47_[BRA]
______GG____CG________AAAA__
46._RB_47_[BRA]
______GG____CG________AAAA__
47._RUQ_135
__________CC________GG__AAGG
48._RUQ_135
______GG____CG________AAAA__
49._RUQ_135
____AA____GG__CC____GG__AAGG
50._GC-05-101-3-3
AACCAAGGCC__CGGGAAAAGGAAAACC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGAATTGGGGGGCCAAGGGGGGAACCGG
1._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
2._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
3._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
4._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
5._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
6._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
7._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
8._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
9._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
10._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
11._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
12._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
13._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
14._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
15._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
16._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
17._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
18._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG__AACCGG
19._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG__AACCGG
20._RB_47_[BRA]
GGAA______GG__AAGG____AA____
21._RB_47_[BRA]
GGAA______GG__AAGG____AA____
22._RB_47_[BRA]
GGAA______GG__AAGG____AA____
23._RB_47_[BRA]
GGAA______GG__AAGG____AA____
24._RB_47_[BRA]
GGAA______GG__AAGG____AA____
25._RB_47_[BRA]
GGAA______GG__AAGG____AA____
26._RB_47_[BRA]
GGAA______GG__AAGG____AA____
27._RB_47_[BRA]
GGAA______GG__AAGG____AA____
28._RB_47_[BRA]
GGAA______GG__AAGG____AA____
29._RB_47_[BRA]
GGAA______GG__AAGG____AA____
30._RB_47_[BRA]
GGAA______GG__AAGG____AA____
31._RB_47_[BRA]
GGAA______GG__AAGG____AA____
32._RB_47_[BRA]
GGAA______GG__AAGG____AA____
33._RB_47_[BRA]
GGAA______GG__AAGG____AA____
34._RB_47_[BRA]
GGAA______GG__AAGG____AA____
35._RB_47_[BRA]
GGAA______GG__AAGG____AA____
36._RB_47_[BRA]
GGAA______GG__AAGG____AA____
37._RB_47_[BRA]
GGAA______GG__AAGG____AA____
38._RB_47_[BRA]
GGAA______GG__AAGG____AA____
39._RB_47_[BRA]
GGAA______GG__AAGG____AA____
40._RB_47_[BRA]
GGAA______GG__AAGG____AA____
41._RB_47_[BRA]
GG________GG____GG__________
42._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
43._GC-05-101-3-03
GGATTTGGGGGGCCAAGGGGGGAACCGG
44._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG__AACCGG
45._RB_47_[BRA]
GGAT______GG__AAGG____AA____
46._RB_47_[BRA]
GGAA______GG__AAGG____AA____
47._RUQ_135
GG______GGGGCCAAGG____AACC__
48._RUQ_135
GGAA______GG__AAGG____AG____
49._RUQ_135
CC______GGGG________GG__CC__
50._GC-05-101-3-3
CCAAAACCGGGGCCAACCCCCCAAGGGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
CCGTTTTTAAAGAACCCCGGAAGGTTCC
1._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
2._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
3._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
4._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
5._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
6._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
7._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
8._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
9._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
10._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
11._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
12._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
13._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
14._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGG__CC
15._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
16._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTT__
17._GC-05-101-3-03
CCGTTTTTAAAGAACC__GGAAGGTTCC
18._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
19._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGG__GGTTCC
20._RB_47_[BRA]
______TT__________________CC
21._RB_47_[BRA]
______TT__________________CC
22._RB_47_[BRA]
______TT__________________CC
23._RB_47_[BRA]
______TT__________________CC
24._RB_47_[BRA]
______TT__________________CC
25._RB_47_[BRA]
______TT__________________CC
26._RB_47_[BRA]
______TT__________________CC
27._RB_47_[BRA]
______TT__________________CC
28._RB_47_[BRA]
______TT__________________CC
29._RB_47_[BRA]
______TT__________________CC
30._RB_47_[BRA]
______TT__________________CC
31._RB_47_[BRA]
______TT__________________CC
32._RB_47_[BRA]
______TT__________________CC
33._RB_47_[BRA]
______TT__________________CC
34._RB_47_[BRA]
______TT__________________CC
35._RB_47_[BRA]
______TT__________________CC
36._RB_47_[BRA]
______TT__________________CC
37._RB_47_[BRA]
______TT__________________CC
38._RB_47_[BRA]
______TT__________________CC
39._RB_47_[BRA]
______TT__________________CC
40._RB_47_[BRA]
______TT____________________
41._RB_47_[BRA]
______TT__________________CC
42._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
43._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
44._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAA__TTCC
45._RB_47_[BRA]
______TT__________________CC
46._RB_47_[BRA]
______TT__________________CC
47._RUQ_135
__GTTT____AG____________CTCC
48._RUQ_135
______TT__________________CC
49._RUQ_135
____TT__AA________________CC
50._GC-05-101-3-3
GGAC__AA__AGAAGG__GGAACCAGGG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
CCTTGGGGCCCCCCGGGGACAAGGGGAA
1._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
2._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
3._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
4._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
5._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
6._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
7._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
8._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
9._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
10._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
11._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
12._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
13._GC-08-065-1-87
CCTTGGGGCCCC__GGGGACAAGGGGAA
14._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
15._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGAC__GGGGAA
16._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
17._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
18._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
19._GC-08-065-1-87
CCTTGGGGCCCC__GGGGACAAGGGGAA
20._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
21._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
22._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
23._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
24._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
25._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
26._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
27._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
28._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
29._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
30._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
31._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
32._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
33._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
34._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
35._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
36._RB_47_[BRA]
CC____GG__CCCCGG__AC__GGGG__
37._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
38._RB_47_[BRA]
CC____GG__CC__GG__ACAAGGGG__
39._RB_47_[BRA]
CC____GG__CC__GG__ACAAGGGG__
40._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
41._RB_47_[BRA]
__________CCCCGG__ACAA__GG__
42._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
43._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
44._GC-08-065-1-87
CCTTGG__CCCCACGGGGACAAGGGGAA
45._RB_47_[BRA]
CC____GG__CCCCGG__ACAAGGGG__
46._RB_47_[BRA]
CC________CCACGG__ACAAGGGG__
47._RUQ_135
__TT__GGCCCCCC__GGACAAGGGGAA
48._RUQ_135
CC____GG__CCCCGG__ACAAGGGG__
49._RUQ_135
______CCCC__CC__GGACAA______
50._GC-05-101-3-3
GGAAGGCCGGGGCCGGGGACAACCCCAA
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CCCGAACTCCGGCCACGGACCCCCAAAC
1._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
2._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
3._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
4._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
5._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
6._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
7._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
8._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
9._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
10._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
11._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
12._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
13._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
14._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
15._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
16._GC-05-161-4-14
CCCGAA__CCGGCCACGGACCCCCAAAC
17._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
18._GC-08-065-1-87
CCCGAACT__GGCCACGGACCCCCAAAC
19._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
20._RB_47_[BRA]
____AACT__________ACCC______
21._RB_47_[BRA]
____AACT__________ACCC______
22._RB_47_[BRA]
____AACT__________ACCC______
23._RB_47_[BRA]
____AACT__________ACCC______
24._RB_47_[BRA]
____AACT__________ACCC______
25._RB_47_[BRA]
____AACT__________ACCC______
26._RB_47_[BRA]
____AACT__________ACCC______
27._RB_47_[BRA]
____AACT__________ACCC______
28._RB_47_[BRA]
____AACT__________ACCC______
29._RB_47_[BRA]
____AACT__________ACCC______
30._RB_47_[BRA]
____AACT__________ACCC______
31._RB_47_[BRA]
____AACT__________ACCC______
32._RB_47_[BRA]
____AACT__________ACCC______
33._RB_47_[BRA]
____AACT__________ACCC______
34._RB_47_[BRA]
____AACT__________ACCC______
35._RB_47_[BRA]
____AACT__________ACCC______
36._RB_47_[BRA]
____AACT__________ACCC______
37._RB_47_[BRA]
____AACT__________ACCC______
38._RB_47_[BRA]
____AACT__________ACCC______
39._RB_47_[BRA]
____AACT__________ACCC______
40._RB_47_[BRA]
____AA____________ACCC______
41._RB_47_[BRA]
____AACT__________ACCC______
42._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
43._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
44._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
45._RB_47_[BRA]
____AACT__________ACCC______
46._RB_47_[BRA]
____AACT__________ACCC______
47._RUQ_135
__________________ACCC____AC
48._RUQ_135
____AACT__________ACCC______
49._RUQ_135
__CG________________GG______
50._GC-05-101-3-3
______AGCCGGCCAC__AC__GGAAAC
 85 86 87 88 89 90 91 92 93 94 95    
_Input profile
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
1._GC-05-101-3-03
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
2._GC-05-101-3-03
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
3._GC-05-101-3-03
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
4._GC-05-161-4-14
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
5._GC-05-161-4-14
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
6._GC-05-161-4-14
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
7._GC-05-161-4-14
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
8._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
9._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
10._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
11._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
12._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
13._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
14._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
15._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
16._GC-05-161-4-14
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
17._GC-05-101-3-03
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
18._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
19._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
20._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
21._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
22._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
23._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
24._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
25._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
26._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
27._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
28._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
29._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
30._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
31._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
32._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
33._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
34._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
35._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
36._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
37._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
38._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
39._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
40._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
41._RB_47_[BRA]
CCCC________CTGGCC____X_XX_XX_X
42._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
43._GC-05-101-3-03
CCCCTT__AACCCTGGCCTTGGX_XX_XX_X
44._GC-08-065-1-87
CCCCTTTTAACCCTGGCTTTGGX_XX_XX_X
45._RB_47_[BRA]
CCCCTT__AA__CTGGCC____X_XX_XX_X
46._RB_47_[BRA]
CCCCTT__AA__CTGGCT____X_XX_XX_X
47._RUQ_135
CC______AACCCTGG______X_XX_XX_X
48._RUQ_135
CCCCCT__AA__CTGGCC____X_XX_XX_X
49._RUQ_135
__CC__________________X_XX_XX_X
50._GC-05-101-3-3
GGGG__AA____AGCCGGAAGGX_XX_XX_X

Input profile: RB_47_[BRA] GC-05-161-4-14

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

1._RB_47_[BRA] GC-05-101-3-03

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

2._RB_47_[BRA] GC-05-101-3-03

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

3._RB_47_[BRA] GC-05-101-3-03

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

4._RB_47_[BRA] GC-05-161-4-14

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

5._RB_47_[BRA] GC-05-161-4-14

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

6._RB_47_[BRA] GC-05-161-4-14

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

7._RB_47_[BRA] GC-05-161-4-14

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

8._RB_47_[BRA] GC-08-065-1-87

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

9._RB_47_[BRA] GC-08-065-1-87

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

10._RB_47_[BRA] GC-08-065-1-87

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

11._RB_47_[BRA] GC-08-065-1-87

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

12._RB_47_[BRA] GC-08-065-1-87

identical
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

13._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

14._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

15._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

16._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

17._RB_47_[BRA] GC-05-101-3-03

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

18._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

19._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

20._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 11
 Dapeng Zhang, 2016

21._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 9
 Dapeng Zhang, 2016

22._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 1
 Dapeng Zhang, 2016

23._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 3
 Dapeng Zhang, 2016

24._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 4
 Dapeng Zhang, 2016

25._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

26._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 3
 Dapeng Zhang, 2016

27._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 4
 Dapeng Zhang, 2016

28._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 5
 Dapeng Zhang, 2016

29._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 1 > FP
 Dapeng Zhang, 2016

30._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 3
 Dapeng Zhang, 2016

31._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 4
 Dapeng Zhang, 2016

32._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 5
 Dapeng Zhang, 2016

33._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 6
 Dapeng Zhang, 2016

34._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 7
 Dapeng Zhang, 2016

35._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 8
 Dapeng Zhang, 2016

36._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 10
 Dapeng Zhang, 2016

37._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 5
 Dapeng Zhang, 2016

38._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 1
 Dapeng Zhang, 2016

39._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 2
 Dapeng Zhang, 2016

40._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

41._RB_47_[BRA]

identical
31 shared markers

 View  View all  Clone  Any
Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

42._RB_47_[BRA] GC-08-065-1-87

99.5 %
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

43._RB_47_[BRA] GC-05-101-3-03

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP3
 Mars, 2018

44._RB_47_[BRA] GC-08-065-1-87

98.9 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

45._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 2 > FP
 Dapeng Zhang, 2016

46._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 12
 Dapeng Zhang, 2016

47._RB_47_[BRA] RUQ_135

96.3 %
41 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

48._RB_47_[BRA] RUQ_135

95 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

49._RB_47_[BRA] RUQ_135

84.6 %
26 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

50._RB_47_[BRA] GC-05-101-3-3

50 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 3, Rep: 3, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP1309
56TcSNP151 57TcSNP1520 58TcSNP799 59TcSNP899 60TcSNP226
61TcSNP1439 62TcSNP1442 63TcSNP193 64TcSNP25 65TcSNP364
66TcSNP144 67TcSNP230 68TcSNP560 69TcSNP723 70TcSNP731
71TcSNP701 72TcSNP1041 73TcSNP645 74TcSNP917 75Tcm003s01336581
76Tcm003s07402719 77Tcm001s00947643 78Tcm006s26664133 79Tcm002s20575712 80TcSNP529
81TcSNP1458 82TcSNP60 83TcSNP430 84TcSNP823 85TcSNP619
86TcSNP994 87TcSNP1144 88TcSNP1156 89TcSNP469 90TcSNP999
91TcSNP242 92TcSNP1253 93TcSNP1414 94TcSNP154 95TcSNP240