SNP Profiles of RB 47 [BRA]   View Data

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 Key

 1234567891011121314
_Input profile
AAAACCCCGGAATTCCCTTTGGTTTTTT
1._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
2._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
3._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
4._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
5._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
6._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
7._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
8._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
9._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
10._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
11._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
12._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
13._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
14._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
15._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
16._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
17._GC-05-101-3-03
AAAACCCCGGAATTCCCTTT_TTTTTT
18._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
19._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
20._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
21._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
22._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
23._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
24._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
25._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
26._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
27._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
28._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
29._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
30._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
31._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
32._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
33._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
34._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
35._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
36._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
37._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
38._RB_47_[BRA]
AAAACCCC____CTTT__TT_
39._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
40._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
41._RB_47_[BRA]
AAAACCCC_____TTGG_TT_
42._GC-08-065-1-87
AAAACCCCGGAACTCCCTTTGGTTTTTT
43._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
44._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
45._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
46._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
47._RUQ_135
__CCCC__CC_-__TTTT_
48._RUQ_135
AAAACCCC____CTCTAG_TT_
49._RUQ_135
___CC____CT___TT_
50._GC-05-101-3-3
AAAA_CCGGAA_GGAG_GGAAAAAA
 1516171819202122232425262728
_Input profile
TTCCAAGGGGCCCGCCAATTGGAAAAGG
1._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
2._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
3._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
4._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
5._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
6._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
7._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
8._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
9._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
10._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
11._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
12._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
13._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
14._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
15._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
16._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
17._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
18._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
19._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
20._RB_47_[BRA]
___GG__CG____AAAA_
21._RB_47_[BRA]
___GG__CG____AAAA_
22._RB_47_[BRA]
___GG__CG____AAAA_
23._RB_47_[BRA]
___GG__CG____AAAA_
24._RB_47_[BRA]
___GG__CG____AAAA_
25._RB_47_[BRA]
___GG__CG____AAAA_
26._RB_47_[BRA]
___GG__CG____AAAA_
27._RB_47_[BRA]
___GG__CG____AAAA_
28._RB_47_[BRA]
___GG__CG____AAAA_
29._RB_47_[BRA]
___GG__CG____AAAA_
30._RB_47_[BRA]
___GG__CG____AAAA_
31._RB_47_[BRA]
___GG__CG____AAAA_
32._RB_47_[BRA]
___GG__CG____AAAA_
33._RB_47_[BRA]
___GG__CG____AAAA_
34._RB_47_[BRA]
___GG__CG____AAAA_
35._RB_47_[BRA]
___GG__CG____AAAA_
36._RB_47_[BRA]
___GG__CG____AAAA_
37._RB_47_[BRA]
___GG__CG____AAAA_
38._RB_47_[BRA]
___GG__CG____AAAA_
39._RB_47_[BRA]
___GG__CG____AAAA_
40._RB_47_[BRA]
___GG__CG____AAAA_
41._RB_47_[BRA]
___GG__CG____AAAA_
42._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
43._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
44._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
45._RB_47_[BRA]
___GG__CG____AAAA_
46._RB_47_[BRA]
___GG__CG____AAAA_
47._RUQ_135
_____CC____GG_AAGG
48._RUQ_135
___GG__CG____AAAA_
49._RUQ_135
__AA__GG_CC__GG_AAGG
50._GC-05-101-3-3
AACCAAGGCC_CGGGAAAAGGAAAACC
 2930313233343536373839404142
_Input profile
GGAATTGGGGGGCCAAGGGGGGAACCGG
1._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
2._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
3._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
4._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
5._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
6._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
7._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
8._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
9._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
10._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
11._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
12._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
13._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
14._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
15._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
16._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
17._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
18._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG_AACCGG
19._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG_AACCGG
20._RB_47_[BRA]
GGAA___GG_AAGG__AA__
21._RB_47_[BRA]
GGAA___GG_AAGG__AA__
22._RB_47_[BRA]
GGAA___GG_AAGG__AA__
23._RB_47_[BRA]
GGAA___GG_AAGG__AA__
24._RB_47_[BRA]
GGAA___GG_AAGG__AA__
25._RB_47_[BRA]
GGAA___GG_AAGG__AA__
26._RB_47_[BRA]
GGAA___GG_AAGG__AA__
27._RB_47_[BRA]
GGAA___GG_AAGG__AA__
28._RB_47_[BRA]
GGAA___GG_AAGG__AA__
29._RB_47_[BRA]
GGAA___GG_AAGG__AA__
30._RB_47_[BRA]
GGAA___GG_AAGG__AA__
31._RB_47_[BRA]
GGAA___GG_AAGG__AA__
32._RB_47_[BRA]
GGAA___GG_AAGG__AA__
33._RB_47_[BRA]
GGAA___GG_AAGG__AA__
34._RB_47_[BRA]
GGAA___GG_AAGG__AA__
35._RB_47_[BRA]
GGAA___GG_AAGG__AA__
36._RB_47_[BRA]
GGAA___GG_AAGG__AA__
37._RB_47_[BRA]
GGAA___GG_AAGG__AA__
38._RB_47_[BRA]
GGAA___GG_AAGG__AA__
39._RB_47_[BRA]
GGAA___GG_AAGG__AA__
40._RB_47_[BRA]
GGAA___GG_AAGG__AA__
41._RB_47_[BRA]
GG____GG__GG_____
42._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
43._GC-05-101-3-03
GGATTTGGGGGGCCAAGGGGGGAACCGG
44._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG_AACCGG
45._RB_47_[BRA]
GGAT___GG_AAGG__AA__
46._RB_47_[BRA]
GGAA___GG_AAGG__AA__
47._RUQ_135
GG___GGGGCCAAGG__AACC_
48._RUQ_135
GGAA___GG_AAGG__AG__
49._RUQ_135
CC___GGGG____GG_CC_
50._GC-05-101-3-3
CCAAAACCGGGGCCAACCCCCCAAGGGG
 4344454647484950515253545556
_Input profile
CCGTTTTTAAAGAACCCCGGAAGGTTCC
1._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
2._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
3._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
4._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
5._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
6._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
7._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
8._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
9._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
10._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
11._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
12._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
13._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
14._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
15._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGG_CC
16._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
17._GC-05-101-3-03
CCGTTTTTAAAGAACC_GGAAGGTTCC
18._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
19._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGG_GGTTCC
20._RB_47_[BRA]
___TT_________CC
21._RB_47_[BRA]
___TT_________CC
22._RB_47_[BRA]
___TT_________CC
23._RB_47_[BRA]
___TT_________CC
24._RB_47_[BRA]
___TT_________CC
25._RB_47_[BRA]
___TT_________CC
26._RB_47_[BRA]
___TT_________CC
27._RB_47_[BRA]
___TT_________CC
28._RB_47_[BRA]
___TT_________CC
29._RB_47_[BRA]
___TT_________CC
30._RB_47_[BRA]
___TT_________CC
31._RB_47_[BRA]
___TT_________CC
32._RB_47_[BRA]
___TT_________CC
33._RB_47_[BRA]
___TT_________CC
34._RB_47_[BRA]
___TT_________CC
35._RB_47_[BRA]
___TT_________CC
36._RB_47_[BRA]
___TT_________CC
37._RB_47_[BRA]
___TT_________CC
38._RB_47_[BRA]
___TT_________CC
39._RB_47_[BRA]
___TT_________CC
40._RB_47_[BRA]
___TT_________CC
41._RB_47_[BRA]
___TT__________
42._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
43._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
44._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAA_TTCC
45._RB_47_[BRA]
___TT_________CC
46._RB_47_[BRA]
___TT_________CC
47._RUQ_135
_GTTT__AG______CT_
48._RUQ_135
___TT_________CC
49._RUQ_135
__TT_AA_________
50._GC-05-101-3-3
GGAC_AA_AGAAGG_GGAACCAGGG
 5758596061626364656667686970
_Input profile
TTGGGGCCCCCCGGGGACAAGGGGAACC
1._GC-05-161-4-14
TTGGGGCCCCCCGGGGACAAGGGGAACC
2._GC-05-101-3-03
TTGGGGCCCCCCGGGGACAAGGGGAACC
3._GC-05-101-3-03
TTGGGGCCCCCCGGGGACAAGGGGAACC
4._GC-05-101-3-03
TTGGGGCCCCCCGGGGACAAGGGGAACC
5._GC-05-161-4-14
TTGGGGCCCCCCGGGGACAAGGGGAACC
6._GC-05-161-4-14
TTGGGGCCCCCCGGGGACAAGGGGAACC
7._GC-05-161-4-14
TTGGGGCCCCCCGGGGACAAGGGGAACC
8._GC-05-161-4-14
TTGGGGCCCCCCGGGGACAAGGGGAACC
9._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
10._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
11._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
12._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
13._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
14._GC-08-065-1-87
TTGGGGCCCC_GGGGACAAGGGGAACC
15._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
16._GC-08-065-1-87
TTGGGGCCCCCCGGGGAC_GGGGAACC
17._GC-05-101-3-03
TTGGGGCCCCCCGGGGACAAGGGGAACC
18._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
19._GC-08-065-1-87
TTGGGGCCCC_GGGGACAAGGGGAACC
20._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
21._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
22._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
23._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
24._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
25._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
26._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
27._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
28._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
29._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
30._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
31._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
32._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
33._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
34._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
35._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
36._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
37._RB_47_[BRA]
__GG_CCCCGG_AC_GGGG__
38._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
39._RB_47_[BRA]
__GG_CC_GG_ACAAGGGG__
40._RB_47_[BRA]
__GG_CC_GG_ACAAGGGG__
41._RB_47_[BRA]
____CCCCGG_ACAA_GG__
42._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
43._GC-05-101-3-03
TTGGGGCCCCCCGGGGACAAGGGGAACC
44._GC-08-065-1-87
TTGG_CCCCACGGGGACAAGGGGAACC
45._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
46._RB_47_[BRA]
____CCACGG_ACAAGGGG__
47._RUQ_135
TT-GGCCCCCC_GGACAAGGGGAA_
48._RUQ_135
__GG_CCCCGG_ACAAGGGG__
49._RUQ_135
__CCCC_CC_GGACAA____
50._GC-05-101-3-3
AAGGCCGGGGCCGGGGACAACCCCAA_
 7172737475767778798081828384
_Input profile
CGAACCGGCCACGGACCCCCAAACCCCC
1._GC-05-161-4-14
CGAACCGGCCACGGACCCCCAAACCCCC
2._GC-05-101-3-03
CGAACCGGCCACGGACCCCCAAACCCCC
3._GC-05-101-3-03
CGAACCGGCCACGGACCCCCAAACCCCC
4._GC-05-101-3-03
CGAACCGGCCACGGACCCCCAAACCCCC
5._GC-05-161-4-14
CGAACCGGCCACGGACCCCCAAACCCCC
6._GC-05-161-4-14
CGAACCGGCCACGGACCCCCAAACCCCC
7._GC-05-161-4-14
CGAACCGGCCACGGACCCCCAAACCCCC
8._GC-05-161-4-14
CGAACCGGCCACGGACCCCCAAACCCCC
9._GC-08-065-1-87
CGAACCGGCCACGGACCCCCAAACCCCC
10._GC-08-065-1-87
CGAACCGGCCACGGACCCCCAAACCCCC
11._GC-08-065-1-87
CGAACCGGCCACGGACCCCCAAACCCCC
12._GC-08-065-1-87
CGAACCGGCCACGGACCCCCAAACCCCC
13._GC-08-065-1-87
CGAACCGGCCACGGACCCCCAAACCCCC
14._GC-08-065-1-87
CGAACCGGCCACGGACCCCCAAACCCCC
15._GC-08-065-1-87
CGAACCGGCCACGGACCCCCAAACCCCC
16._GC-08-065-1-87
CGAACCGGCCACGGACCCCCAAACCCCC
17._GC-05-101-3-03
CGAACCGGCCACGGACCCCCAAACCCCC
18._GC-08-065-1-87
CGAA_GGCCACGGACCCCCAAACCCCC
19._GC-08-065-1-87
CGAACCGGCCACGGACCCCCAAACCCCC
20._RB_47_[BRA]
_AA_____ACCC___CCCC
21._RB_47_[BRA]
_AA_____ACCC___CCCC
22._RB_47_[BRA]
_AA_____ACCC___CCCC
23._RB_47_[BRA]
_AA_____ACCC___CCCC
24._RB_47_[BRA]
_AA_____ACCC___CCCC
25._RB_47_[BRA]
_AA_____ACCC___CCCC
26._RB_47_[BRA]
_AA_____ACCC___CCCC
27._RB_47_[BRA]
_AA_____ACCC___CCCC
28._RB_47_[BRA]
_AA_____ACCC___CCCC
29._RB_47_[BRA]
_AA_____ACCC___CCCC
30._RB_47_[BRA]
_AA_____ACCC___CCCC
31._RB_47_[BRA]
_AA_____ACCC___CCCC
32._RB_47_[BRA]
_AA_____ACCC___CCCC
33._RB_47_[BRA]
_AA_____ACCC___CCCC
34._RB_47_[BRA]
_AA_____ACCC___CCCC
35._RB_47_[BRA]
_AA_____ACCC___CCCC
36._RB_47_[BRA]
_AA_____ACCC___CCCC
37._RB_47_[BRA]
_AA_____ACCC___CCCC
38._RB_47_[BRA]
_AA_____ACCC___CCCC
39._RB_47_[BRA]
_AA_____ACCC___CCCC
40._RB_47_[BRA]
_AA_____ACCC___CCCC
41._RB_47_[BRA]
_AA_____ACCC___CCCC
42._GC-08-065-1-87
CGAACCGGCCACGGACCCCCAAACCCCC
43._GC-05-101-3-03
CGAACCGGCCACGGACCCCCAAACCCCC
44._GC-08-065-1-87
CGAACCGGCCACGGACCCCCAAACCCCC
45._RB_47_[BRA]
_AA_____ACCC___CCCC
46._RB_47_[BRA]
_AA_____ACCC___CCCC
47._RUQ_135
_______ACCC__ACCC_
48._RUQ_135
_AA_____ACCC___CCCC
49._RUQ_135
CG_______GG____CC
50._GC-05-101-3-3
__CCGGCCAC_AC_GGAAACGGGG
 858687888990919293     
_Input profile
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
1._GC-05-161-4-14
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
2._GC-05-101-3-03
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
3._GC-05-101-3-03
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
4._GC-05-101-3-03
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
5._GC-05-161-4-14
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
6._GC-05-161-4-14
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
7._GC-05-161-4-14
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
8._GC-05-161-4-14
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
9._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
10._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
11._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
12._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
13._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
14._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
15._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
16._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
17._GC-05-101-3-03
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
18._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
19._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
20._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
21._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
22._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
23._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
24._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
25._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
26._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
27._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
28._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
29._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
30._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
31._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
32._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
33._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
34._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
35._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
36._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
37._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
38._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
39._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
40._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
41._RB_47_[BRA]
____CTGGCC__X_XX_XX_XX_XX_X
42._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
43._GC-05-101-3-03
TT_AACCCTGGCCTTGGX_XX_XX_XX_XX_X
44._GC-08-065-1-87
TTTTAACCCTGGCTTTGGX_XX_XX_XX_XX_X
45._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
46._RB_47_[BRA]
TT_AA_CTGGCT__X_XX_XX_XX_XX_X
47._RUQ_135
__AACCCTGG___X_XX_XX_XX_XX_X
48._RUQ_135
CT_AA_CTGGCC__X_XX_XX_XX_XX_X
49._RUQ_135
_________X_XX_XX_XX_XX_X
50._GC-05-101-3-3
_AA__AGCCGGAAGGX_XX_XX_XX_XX_X

Input profile: RB_47_[BRA] GC-05-161-4-14

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

1._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

2._RB_47_[BRA] GC-05-101-3-03

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

3._RB_47_[BRA] GC-05-101-3-03

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

4._RB_47_[BRA] GC-05-101-3-03

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

5._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

6._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

7._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

8._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

9._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

10._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

11._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

12._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

13._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

14._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

15._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

16._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

17._RB_47_[BRA] GC-05-101-3-03

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

18._RB_47_[BRA] GC-08-065-1-87

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

19._RB_47_[BRA] GC-08-065-1-87

identical
90 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

20._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 11
 Dapeng Zhang, 2016

21._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 9
 Dapeng Zhang, 2016

22._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

23._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 3
 Dapeng Zhang, 2016

24._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 4
 Dapeng Zhang, 2016

25._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

26._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

27._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 3
 Dapeng Zhang, 2016

28._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 4
 Dapeng Zhang, 2016

29._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 5
 Dapeng Zhang, 2016

30._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 1 > FP
 Dapeng Zhang, 2016

31._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 3
 Dapeng Zhang, 2016

32._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 4
 Dapeng Zhang, 2016

33._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 5
 Dapeng Zhang, 2016

34._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 6
 Dapeng Zhang, 2016

35._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 7
 Dapeng Zhang, 2016

36._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 8
 Dapeng Zhang, 2016

37._RB_47_[BRA]

identical
37 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 10
 Dapeng Zhang, 2016

38._RB_47_[BRA]

identical
37 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 5
 Dapeng Zhang, 2016

39._RB_47_[BRA]

identical
37 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 1
 Dapeng Zhang, 2016

40._RB_47_[BRA]

identical
37 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 2
 Dapeng Zhang, 2016

41._RB_47_[BRA]

identical
29 shared markers

 View  View all  Clone  Any
Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

42._RB_47_[BRA] GC-08-065-1-87

99.5 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

43._RB_47_[BRA] GC-05-101-3-03

99.5 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP3
 Mars, 2018

44._RB_47_[BRA] GC-08-065-1-87

98.9 %
90 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

45._RB_47_[BRA]

98.7 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 2 > FP
 Dapeng Zhang, 2016

46._RB_47_[BRA]

97.3 %
37 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 12
 Dapeng Zhang, 2016

47._RB_47_[BRA] RUQ_135

96.3 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

48._RB_47_[BRA] RUQ_135

94.7 %
38 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

49._RB_47_[BRA] RUQ_135

84 %
25 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

50._RB_47_[BRA] GC-05-101-3-3

51.3 %
78 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 3, Rep: 3, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP1309
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240