SNP Profiles of VB-276   View Data

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 1234567891011121314
_Input profile
ATACCTCCAGGGCCCCCTCCGGCTCTCT
1._GC-02-012-2-04
ATACCTCCAGGGCCCCCTCCGGCTCTCT
2._GC-07-042-2-21
ATACCTCCAGGGCCCCCTCCGGCTCTCT
3._GC-07-042-2-21
ATACCTCCAGGGCCCCCTCCGGCTCTCT
4._GC-07-042-2-21
ATACCTCCAGGGCCCCCTCCGGCTCTCT
5._GC-02-012-2-04
ATACCTCCAGGGCCCCCTCCGGCTCTCT
6._GC-02-012-2-04
ATACCTCCAGGGCCCCCTCCGGCTCTCT
7._GC-02-012-2-04
ATACCTCCAGGGCCCCCTCCGGCTCTCT
8._GC-02-012-2-04
ATACCTCCAGGGCCCCCTCCGGCTCTCT
9._GC-01-017-1-17
ATACCTCCAGGGCCCCCTCCGGCTCTCT
10._GC-01-017-1-17
ATACCTCCAGGGCCCCCTCCGGCTCTCT
11._GC-01-017-1-17
ATACCTCCAGGGCCCCCTCCGGCTCTCT
12._GC-01-017-1-17
ATACCTCCAGGGCCCCCTCCGGCTCTCT
13._GC-01-017-1-17
ATACCTCCAGGGCCCCCTCCGGCTCTCT
14._GC-07-042-2-21
ATACCTCCAGGGCCCCCTCCGGCTCTCT
15._GC-02-012-2-04
ATACCTCCAGGGCCCCCTCCGGCTCTCT
16._GC-02-012-2-04
ATAC_CCAGGGCCCCCTCCGGCTCTCT
17._GC-02-012-2-04
ATACCTCCAGGGCCCCCTCCGGCTCTCT
18._GC-01-017-1-17
ATACCTCCAGGGCCCCCTCCGGCTCTCT
19._GC-07-042-2-21
ATAC_CCAGGG_GGAG_GGAGAGAG
 1516171819202122232425262728
_Input profile
AAACAAAGCGCGGGCCAGCTAGAAAACG
1._GC-02-012-2-04
AAACAAAGCGCGGGCCAGCTAGAAAACG
2._GC-07-042-2-21
AAACAAAGCGCGGGCCAGCTAGAAAACG
3._GC-07-042-2-21
AAACAAAGCGCGGGCCAGCTAGAAAACG
4._GC-07-042-2-21
AAACAAAGCGCGGGCCAGCTAGAAAACG
5._GC-02-012-2-04
AAACAAAGCGCGGGCCAGCTAGAAAACG
6._GC-02-012-2-04
AAACAAAGCGCGGGCCAGCTAGAAAACG
7._GC-02-012-2-04
AAACAAAGCGCGGGCCAGCTAGAAAACG
8._GC-02-012-2-04
AAACAAAGCGCGGGCCAGCTAGAAAACG
9._GC-01-017-1-17
AAACAAAGCGCGGGCCAGCTAGAAAACG
10._GC-01-017-1-17
AAACAAAGCGCGGGCCAGCTAGAAAACG
11._GC-01-017-1-17
AAACAAAGCGCGGGCCAGCTAGAAAACG
12._GC-01-017-1-17
AAACAAAGCGCGGGCCAGCTAGAAAACG
13._GC-01-017-1-17
AAACAAAGCGCGGGCCAGCTAGAAAACG
14._GC-07-042-2-21
AAACAAAGCGCGGGCCAGCTAGAAAACG
15._GC-02-012-2-04
AAACAAAGCGCGGGCCAGCTAGAAAACG
16._GC-02-012-2-04
AAACAAAGCGCGGGCCAGCTAGAAAACG
17._GC-02-012-2-04
AAACAAAGCGCGGGCCAGCTAGAAAACG
18._GC-01-017-1-17
AAACAAAGCGCGGGCCAGCTAGAAAACG
19._GC-07-042-2-21
TTACAAAGCG_GGGGAGAGAGAAAACG
 2930313233343536373839404142
_Input profile
CCATCTGTAGCGACAAGGGGGTAACTAG
1._GC-02-012-2-04
CCATCTGTAGCGACAAGGGGGTAACTAG
2._GC-07-042-2-21
CCATCTGTAGCGACAAGGGGGTAACTAG
3._GC-07-042-2-21
CCATCTGTAGCGACAAGGGGGTAACTAG
4._GC-07-042-2-21
CCATCTGTAGCGACAAGGGGGTAACTAG
5._GC-02-012-2-04
CCATCTGTAGCGACAAGGGGGTAACTAG
6._GC-02-012-2-04
CCATCTGTAGCGACAAGGGGGTAACTAG
7._GC-02-012-2-04
CCATCTGTAGCGACAAGGGGGTAACTAG
8._GC-02-012-2-04
CCATCTGTAGCGACAAGGGGGTAACTAG
9._GC-01-017-1-17
CCATCTGTAGCGACAAGGGGGTAACTAG
10._GC-01-017-1-17
CCATCTGTAGCGACAAGGGGGTAACTAG
11._GC-01-017-1-17
CCATCTGTAGCGACAAGGGGGTAACTAG
12._GC-01-017-1-17
CCATCTGTAGCGACAAGGGGGTAACTAG
13._GC-01-017-1-17
CCATCTGTAGCGACAAGGGGGTAACTAG
14._GC-07-042-2-21
CCATCTGTAGCGACAAGGGGGTAACTAG
15._GC-02-012-2-04
CCATCTGTAGCGACAAGGGGGT_CTAG
16._GC-02-012-2-04
CCATCTGTAGCGACAAGGGGGTAACTAG
17._GC-02-012-2-04
CCATCTGTAGCGACAAGGGGGTAACTAG
18._GC-01-017-1-17
CCATCTGTAGCGACAAGGGGGTAACTAG
19._GC-07-042-2-21
GGATAGACAGCGACAACCCCACAAAGAG
 4344454647484950515253545556
_Input profile
CCGGATCTGGAGAACTCCGGGGGGTTCT
1._GC-02-012-2-04
CCGGATCTGGAGAACTCCGGGGGGTTCT
2._GC-07-042-2-21
CCGGATCTGGAGAACTCCGGGGGGTTCT
3._GC-07-042-2-21
CCGGATCTGGAGAACTCCGGGGGGTTCT
4._GC-07-042-2-21
CCGGATCTGGAGAACTCCGGGGGGTTCT
5._GC-02-012-2-04
CCGGATCTGGAGAACTCCGGGGGGTTCT
6._GC-02-012-2-04
CCGGATCTGGAGAACTCCGGGGGGTTCT
7._GC-02-012-2-04
CCGGATCTGGAGAACTCCGGGGGGTTCT
8._GC-02-012-2-04
CCGGATCTGGAGAACTCCGGGGGGTTCT
9._GC-01-017-1-17
CCGGATCTGGAGAACTCCGGGGGGTTCT
10._GC-01-017-1-17
CCGGATCTGGAGAACTCCGGGGGGTTCT
11._GC-01-017-1-17
CCGGATCTGGAGAACTCCGGGGGGTTCT
12._GC-01-017-1-17
CCGGATCTGGAGAACTCCGGGGGGTTCT
13._GC-01-017-1-17
CCGGATCTGGAGAACTCCGGGGGGTTCT
14._GC-07-042-2-21
CCGGATCTGGAGAACTCCGG_GGTTCT
15._GC-02-012-2-04
CCGGATCTGGAGAACTCCGGGGGGTTCT
16._GC-02-012-2-04
CCGGATCTGGAGAACTCCGGGGGGTTCT
17._GC-02-012-2-04
CCGGATCTGG_AACTCCGGGGGGTTCT
18._GC-01-017-1-17
CCGGATCTGGAGAACTCCGGGGGGTTCT
19._GC-07-042-2-21
GGCC_AG_AGAGAG_GGGGCCAGAG
 5758596061626364656667686970
_Input profile
CTGTAGCGCTTTACCGAGAAAAGTGGAG
1._GC-02-012-2-04
CTGTAGCGCTTTACCGAGAAAAGTGGAG
2._GC-07-042-2-21
CTGTAGCGCTTTACCGAGAAAAGTGGAG
3._GC-07-042-2-21
CTGTAGCGCTTTACCGAGAAAAGTGGAG
4._GC-07-042-2-21
CTGTAGCGCTTTACCGAGAAAAGTGGAG
5._GC-02-012-2-04
CTGTAGCGCTTTACCGAGAAAAGTGGAG
6._GC-02-012-2-04
CTGTAGCGCTTTACCGAGAAAAGTGGAG
7._GC-02-012-2-04
CTGTAGCGCTTTACCGAGAAAAGTGGAG
8._GC-02-012-2-04
CTGTAGCGCTTTACCGAGAAAAGTGGAG
9._GC-01-017-1-17
CTGTAGCGCTTTACCGAGAAAAGTGGAG
10._GC-01-017-1-17
CTGTAGCGCTTTACCGAGAAAAGTGGAG
11._GC-01-017-1-17
CTGTAGCGCTTTACCGAGAAAAGTGGAG
12._GC-01-017-1-17
CTGTAGCGCTTTACCGAGAAAAGTGGAG
13._GC-01-017-1-17
CTGTAGCGCTTTACCGAGAAAAGTGGAG
14._GC-07-042-2-21
CTGTAGCGCTTTACCGAGAAAAGTGGAG
15._GC-02-012-2-04
CTGTAGCGCTTTACCGAGAAAAGTGGAG
16._GC-02-012-2-04
CTGTAGCGCTTTACCGAGAAAAGTGGAG
17._GC-02-012-2-04
CTGTAGCGCTTTACCGAGAAAAGTGGAG
18._GC-01-017-1-17
CTGTAGCGCTTTACCGAGAAAAGTGGAG
19._GC-07-042-2-21
AGACAGCGAGAAACCGAGAAAAACCCAG
 7172737475767778798081828384
_Input profile
TTCGAGCTACAGCCACAAACCGCTAAAC
1._GC-02-012-2-04
TTCGAGCTACAGCCACAAACCGCTAAAC
2._GC-07-042-2-21
TTCGAGCTACAGCCACAAACCGCTAAAC
3._GC-07-042-2-21
TTCGAGCTACAGCCACAAACCGCTAAAC
4._GC-07-042-2-21
TTCGAGCTACAGCCACAAACCGCTAAAC
5._GC-02-012-2-04
TTCGAGCTACAGCCACAAACCGCTAAAC
6._GC-02-012-2-04
TTCGAGCTACAGCCACAAACCGCTAAAC
7._GC-02-012-2-04
TTCGAGCTACAGCCACAAACCGCTAAAC
8._GC-02-012-2-04
TTCGAGCTACAGCCACAAACCGCTAAAC
9._GC-01-017-1-17
TTCGAGCTACAGCCACAAACCGCTAAAC
10._GC-01-017-1-17
TTCGAGCTACAGCCACAAACCGCTAAAC
11._GC-01-017-1-17
TTCGAGCTACAGCCACAAACCGCTAAAC
12._GC-01-017-1-17
TTCGAGCTACAGCCACAAACCGCTAAAC
13._GC-01-017-1-17
TTCGAGCTACAGCCACAAACCGCTAAAC
14._GC-07-042-2-21
TTCGAGCTACAGCCACAAACCGCTAAAC
15._GC-02-012-2-04
TTCGAGCTACAGCCACAAACCGCTAAAC
16._GC-02-012-2-04
TTCGAGCTACAGCCACAAACCGCTAAAC
17._GC-02-012-2-04
TTCGAGCTACAGCCACAAACCGCTAAAC
18._GC-01-017-1-17
TTCGAGCT_AGCCACAAACCGCTAAAC
19._GC-07-042-2-21
___AGACAGCCAC_ACCGAGAAAC
 8586878889909192939495   
_Input profile
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
1._GC-02-012-2-04
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
2._GC-07-042-2-21
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
3._GC-07-042-2-21
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
4._GC-07-042-2-21
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
5._GC-02-012-2-04
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
6._GC-02-012-2-04
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
7._GC-02-012-2-04
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
8._GC-02-012-2-04
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
9._GC-01-017-1-17
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
10._GC-01-017-1-17
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
11._GC-01-017-1-17
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
12._GC-01-017-1-17
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
13._GC-01-017-1-17
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
14._GC-07-042-2-21
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
15._GC-02-012-2-04
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
16._GC-02-012-2-04
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
17._GC-02-012-2-04
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
18._GC-01-017-1-17
CTTTCTCTAACCTTTTCTATAGX_XX_XX_X
19._GC-07-042-2-21
AGAA_AG__AAAAAGATAGX_XX_XX_X

Input profile: VB_276 GC-07-042-2-21

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

1._VB_276 GC-02-012-2-04

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5 > FP3
 Mars, 2018

2._VB_276 GC-07-042-2-21

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

3._VB_276 GC-07-042-2-21

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

4._VB_276 GC-07-042-2-21

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

5._VB_276 GC-02-012-2-04

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

6._VB_276 GC-02-012-2-04

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP4
 Mars, 2018

7._VB_276 GC-02-012-2-04

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

8._VB_276 GC-02-012-2-04

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

9._VB_276 GC-01-017-1-17

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

10._VB_276 GC-01-017-1-17

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

11._VB_276 GC-01-017-1-17

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

12._VB_276 GC-01-017-1-17

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018

13._VB_276 GC-01-017-1-17

identical
95 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

14._VB_276 GC-07-042-2-21

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

15._VB_276 GC-02-012-2-04

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

16._VB_276 GC-02-012-2-04

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

17._VB_276 GC-02-012-2-04

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018

18._VB_276 GC-01-017-1-17

identical
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

19._VB_276 GC-07-042-2-21

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: GC07, Block: 2, Rep: 21, Tree: 1
Notes: MCCS_Selection_parents
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP1309
56TcSNP151 57TcSNP1520 58TcSNP799 59TcSNP899 60TcSNP226
61TcSNP1439 62TcSNP1442 63TcSNP193 64TcSNP25 65TcSNP364
66TcSNP144 67TcSNP230 68TcSNP560 69TcSNP723 70TcSNP731
71TcSNP701 72TcSNP1041 73TcSNP645 74TcSNP917 75Tcm003s01336581
76Tcm003s07402719 77Tcm001s00947643 78Tcm006s26664133 79Tcm002s20575712 80TcSNP529
81TcSNP1458 82TcSNP60 83TcSNP430 84TcSNP823 85TcSNP619
86TcSNP994 87TcSNP1144 88TcSNP1156 89TcSNP469 90TcSNP999
91TcSNP242 92TcSNP1253 93TcSNP1414 94TcSNP154 95TcSNP240