SNP Profiles of RB 47 [BRA]   View Data

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 Key

 1234567891011121314
_Input profile
AAAACCCCGGAATTCCCTTTGGTTTTTT
1._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
2._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
3._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
4._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
5._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
6._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
7._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
8._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
9._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
10._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
11._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
12._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
13._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
14._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
15._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
16._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
17._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
18._GC-05-101-3-03
AAAACCCCGGAATTCCCTTT_TTTTTT
19._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
20._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
21._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
22._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
23._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
24._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
25._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
26._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
27._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
28._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
29._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
30._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
31._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
32._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
33._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
34._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
35._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
36._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
37._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
38._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
39._RB_47_[BRA]
AAAACCCC____CTTT__TT_
40._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
41._RB_47_[BRA]
AAAACCCC_____TTGG_TT_
42._GC-08-065-1-87
AAAACCCCGGAACTCCCTTTGGTTTTTT
43._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
44._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
45._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
46._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
47._RUQ_135
__CCCC__CC_-__TTTT_
48._RUQ_135
AAAACCCC____CTCTAG_TT_
49._RUQ_135
___CC____CT___TT_
50._GC-05-101-3-3
AAAA_CCGGAA_GGAG_GGAAAAAA
 1516171819202122232425262728
_Input profile
TTCCAAGGGGCCCGCCAATTGGAAAAGG
1._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
2._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
3._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
4._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
5._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
6._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
7._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
8._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
9._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
10._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
11._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
12._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
13._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
14._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
15._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
16._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
17._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
18._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
19._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
20._RB_47_[BRA]
___GG__CG____AAAA_
21._RB_47_[BRA]
___GG__CG____AAAA_
22._RB_47_[BRA]
___GG__CG____AAAA_
23._RB_47_[BRA]
___GG__CG____AAAA_
24._RB_47_[BRA]
___GG__CG____AAAA_
25._RB_47_[BRA]
___GG__CG____AAAA_
26._RB_47_[BRA]
___GG__CG____AAAA_
27._RB_47_[BRA]
___GG__CG____AAAA_
28._RB_47_[BRA]
___GG__CG____AAAA_
29._RB_47_[BRA]
___GG__CG____AAAA_
30._RB_47_[BRA]
___GG__CG____AAAA_
31._RB_47_[BRA]
___GG__CG____AAAA_
32._RB_47_[BRA]
___GG__CG____AAAA_
33._RB_47_[BRA]
___GG__CG____AAAA_
34._RB_47_[BRA]
___GG__CG____AAAA_
35._RB_47_[BRA]
___GG__CG____AAAA_
36._RB_47_[BRA]
___GG__CG____AAAA_
37._RB_47_[BRA]
___GG__CG____AAAA_
38._RB_47_[BRA]
___GG__CG____AAAA_
39._RB_47_[BRA]
___GG__CG____AAAA_
40._RB_47_[BRA]
___GG__CG____AAAA_
41._RB_47_[BRA]
___GG__CG____AAAA_
42._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
43._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
44._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
45._RB_47_[BRA]
___GG__CG____AAAA_
46._RB_47_[BRA]
___GG__CG____AAAA_
47._RUQ_135
_____CC____GG_AAGG
48._RUQ_135
___GG__CG____AAAA_
49._RUQ_135
__AA__GG_CC__GG_AAGG
50._GC-05-101-3-3
AACCAAGGCC_CGGGAAAAGGAAAACC
 2930313233343536373839404142
_Input profile
GGAATTGGGGGGCCAAGGGGAACCGGCC
1._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
2._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGAACCGGCC
3._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGAACCGGCC
4._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGAACCGGCC
5._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
6._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
7._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
8._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
9._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
10._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
11._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
12._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
13._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
14._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
15._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
16._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
17._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
18._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGAACCGGCC
19._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
20._RB_47_[BRA]
GGAA___GG_AAGG_AA___
21._RB_47_[BRA]
GGAA___GG_AAGG_AA___
22._RB_47_[BRA]
GGAA___GG_AAGG_AA___
23._RB_47_[BRA]
GGAA___GG_AAGG_AA___
24._RB_47_[BRA]
GGAA___GG_AAGG_AA___
25._RB_47_[BRA]
GGAA___GG_AAGG_AA___
26._RB_47_[BRA]
GGAA___GG_AAGG_AA___
27._RB_47_[BRA]
GGAA___GG_AAGG_AA___
28._RB_47_[BRA]
GGAA___GG_AAGG_AA___
29._RB_47_[BRA]
GGAA___GG_AAGG_AA___
30._RB_47_[BRA]
GGAA___GG_AAGG_AA___
31._RB_47_[BRA]
GGAA___GG_AAGG_AA___
32._RB_47_[BRA]
GGAA___GG_AAGG_AA___
33._RB_47_[BRA]
GGAA___GG_AAGG_AA___
34._RB_47_[BRA]
GGAA___GG_AAGG_AA___
35._RB_47_[BRA]
GGAA___GG_AAGG_AA___
36._RB_47_[BRA]
GGAA___GG_AAGG_AA___
37._RB_47_[BRA]
GGAA___GG_AAGG_AA___
38._RB_47_[BRA]
GGAA___GG_AAGG_AA___
39._RB_47_[BRA]
GGAA___GG_AAGG_AA___
40._RB_47_[BRA]
GGAA___GG_AAGG_AA___
41._RB_47_[BRA]
GG____GG__GG_____
42._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
43._GC-05-101-3-03
GGATTTGGGGGGCCAAGGGGAACCGGCC
44._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
45._RB_47_[BRA]
GGAT___GG_AAGG_AA___
46._RB_47_[BRA]
GGAA___GG_AAGG_AA___
47._RUQ_135
GG___GGGGCCAAGG_AACC__
48._RUQ_135
GGAA___GG_AAGG_AG___
49._RUQ_135
CC___GGGG_____CC__
50._GC-05-101-3-3
CCAAAACCGGGGCCAACCCCAAGGGGGG
 4344454647484950515253545556
_Input profile
GTTTTTAAAGAACCCCGGGGTTCCCCTT
1._GC-05-161-4-14
GTTTTTAAAGAACCCCGGGGTTCCCCTT
2._GC-05-101-3-03
GTTTTTAAAGAACCCCGGGGTTCCCCTT
3._GC-05-101-3-03
GTTTTTAAAGAACCCCGGGGTTCCCCTT
4._GC-05-101-3-03
GTTTTTAAAGAACCCCGGGGTTCCCCTT
5._GC-05-161-4-14
GTTTTTAAAGAACCCCGGGGTTCCCCTT
6._GC-05-161-4-14
GTTTTTAAAGAACCCCGGGGTTCCCCTT
7._GC-05-161-4-14
GTTTTTAAAGAACCCCGGGGTTCCCCTT
8._GC-05-161-4-14
GTTTTTAAAGAACCCCGGGGTTCCCCTT
9._GC-08-065-1-87
GTTTTTAAAGAACCCCGGGGTTCCCCTT
10._GC-08-065-1-87
GTTTTTAAAGAACCCCGGGGTTCCCCTT
11._GC-08-065-1-87
GTTTTTAAAGAACCCCGGGGTTCCCCTT
12._GC-08-065-1-87
GTTTTTAAAGAACCCCGGGGTTCCCCTT
13._GC-08-065-1-87
GTTTTTAAAGAACCCCGGGGTTCCCCTT
14._GC-08-065-1-87
GTTTTTAAAGAACCCCGGGGTTCCCCTT
15._GC-08-065-1-87
GTTTTTAAAGAACCCCGGGG_CCCCTT
16._GC-08-065-1-87
GTTTTTAAAGAACCCCGGGGTTCCCCTT
17._GC-08-065-1-87
GTTTTTAAAGAACCCCGGGGTTCCCCTT
18._GC-05-101-3-03
GTTTTTAAAGAACC_GGGGTTCCCCTT
19._GC-05-161-4-14
GTTTTTAAAGAACCCCGGGGTT_CCTT
20._RB_47_[BRA]
__TT________CCCC_
21._RB_47_[BRA]
__TT________CCCC_
22._RB_47_[BRA]
__TT________CCCC_
23._RB_47_[BRA]
__TT________CCCC_
24._RB_47_[BRA]
__TT________CCCC_
25._RB_47_[BRA]
__TT________CCCC_
26._RB_47_[BRA]
__TT________CCCC_
27._RB_47_[BRA]
__TT________CCCC_
28._RB_47_[BRA]
__TT________CCCC_
29._RB_47_[BRA]
__TT________CCCC_
30._RB_47_[BRA]
__TT________CCCC_
31._RB_47_[BRA]
__TT________CCCC_
32._RB_47_[BRA]
__TT________CCCC_
33._RB_47_[BRA]
__TT________CCCC_
34._RB_47_[BRA]
__TT________CCCC_
35._RB_47_[BRA]
__TT________CCCC_
36._RB_47_[BRA]
__TT________CCCC_
37._RB_47_[BRA]
__TT________CCCC_
38._RB_47_[BRA]
__TT________CCCC_
39._RB_47_[BRA]
__TT________CCCC_
40._RB_47_[BRA]
__TT_________CC_
41._RB_47_[BRA]
__TT________CC__
42._GC-08-065-1-87
GTTTTTAAAGAACCCCGGGGTTCCCCTT
43._GC-05-101-3-03
GTTTTTAAAGAACCCCGGGGTTCCCCTT
44._GC-08-065-1-87
GTTTTTAAAGAACCCCGG_TTCCCCTT
45._RB_47_[BRA]
__TT________CCCC_
46._RB_47_[BRA]
__TT________CCCC_
47._RUQ_135
GTTT__AG_____CTCC_TT
48._RUQ_135
__TT________CCCC_
49._RUQ_135
_TT_AA_______CC__
50._GC-05-101-3-3
AC_AA_AGAAGG_GGCCAGGGGGAA
 5758596061626364656667686970
_Input profile
GGGGCCCCGGGGACAAGGGGAACCCGAA
1._GC-05-161-4-14
GGGGCCCCGGGGACAAGGGGAACCCGAA
2._GC-05-101-3-03
GGGGCCCCGGGGACAAGGGGAACCCGAA
3._GC-05-101-3-03
GGGGCCCCGGGGACAAGGGGAACCCGAA
4._GC-05-101-3-03
GGGGCCCCGGGGACAAGGGGAACCCGAA
5._GC-05-161-4-14
GGGGCCCCGGGGACAAGGGGAACCCGAA
6._GC-05-161-4-14
GGGGCCCCGGGGACAAGGGGAACCCGAA
7._GC-05-161-4-14
GGGGCCCCGGGGACAAGGGGAACCCGAA
8._GC-05-161-4-14
GGGGCCCCGGGGACAAGGGGAACCCGAA
9._GC-08-065-1-87
GGGGCCCCGGGGACAAGGGGAACCCGAA
10._GC-08-065-1-87
GGGGCCCCGGGGACAAGGGGAACCCGAA
11._GC-08-065-1-87
GGGGCCCCGGGGACAAGGGGAACCCGAA
12._GC-08-065-1-87
GGGGCCCCGGGGACAAGGGGAACCCGAA
13._GC-08-065-1-87
GGGGCCCCGGGGACAAGGGGAACCCGAA
14._GC-08-065-1-87
GGGGCCCCGGGGACAAGGGGAACCCGAA
15._GC-08-065-1-87
GGGGCCCCGGGGACAAGGGGAACCCGAA
16._GC-08-065-1-87
GGGGCCCCGGGGAC_GGGGAACCCGAA
17._GC-08-065-1-87
GGGGCCCCGGGGACAAGGGGAACCCGAA
18._GC-05-101-3-03
GGGGCCCCGGGGACAAGGGGAACCCGAA
19._GC-05-161-4-14
GGGGCCCCGGGGACAAGGGGAACCCGAA
20._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
21._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
22._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
23._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
24._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
25._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
26._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
27._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
28._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
29._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
30._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
31._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
32._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
33._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
34._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
35._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
36._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
37._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
38._RB_47_[BRA]
_GG_CCGG_AC_GGGG___AA
39._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
40._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
41._RB_47_[BRA]
___CCGG_ACAA_GG___AA
42._GC-08-065-1-87
GGGGCCCCGGGGACAAGGGGAACCCGAA
43._GC-05-101-3-03
GGGGCCCCGGGGACAAGGGGAACCCGAA
44._GC-08-065-1-87
GG_CCCCGGGGACAAGGGGAACCCGAA
45._RB_47_[BRA]
_GG_CCGG_ACAAGGGG___AA
46._RB_47_[BRA]
___CCGG_ACAAGGGG___AA
47._RUQ_135
-GGCCCC_GGACAAGGGGAA___
48._RUQ_135
_GG_CCGG_ACAAGGGG___AA
49._RUQ_135
_CCCC__GGACAA____CG_
50._GC-05-101-3-3
GGCCGGGGGGGGACAACCCCAA___
 7172737475767778798081828384
_Input profile
CTCCGGCCACGGACCCCCAAACCCCCTT
1._GC-05-161-4-14
CTCCGGCCACGGACCCCCAAACCCCCTT
2._GC-05-101-3-03
CTCCGGCCACGGACCCCCAAACCCCCTT
3._GC-05-101-3-03
CTCCGGCCACGGACCCCCAAACCCCCTT
4._GC-05-101-3-03
CTCCGGCCACGGACCCCCAAACCCCCTT
5._GC-05-161-4-14
CTCCGGCCACGGACCCCCAAACCCCCTT
6._GC-05-161-4-14
CTCCGGCCACGGACCCCCAAACCCCCTT
7._GC-05-161-4-14
CTCCGGCCACGGACCCCCAAACCCCCTT
8._GC-05-161-4-14
CTCCGGCCACGGACCCCCAAACCCCCTT
9._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
10._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
11._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
12._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
13._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
14._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
15._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
16._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
17._GC-08-065-1-87
CT_GGCCACGGACCCCCAAACCCCCTT
18._GC-05-101-3-03
CTCCGGCCACGGACCCCCAAACCCCCTT
19._GC-05-161-4-14
_CCGGCCACGGACCCCCAAACCCCCTT
20._RB_47_[BRA]
CT_____ACCC___CCCCTT
21._RB_47_[BRA]
CT_____ACCC___CCCCTT
22._RB_47_[BRA]
CT_____ACCC___CCCCTT
23._RB_47_[BRA]
CT_____ACCC___CCCCTT
24._RB_47_[BRA]
CT_____ACCC___CCCCTT
25._RB_47_[BRA]
CT_____ACCC___CCCCTT
26._RB_47_[BRA]
CT_____ACCC___CCCCTT
27._RB_47_[BRA]
CT_____ACCC___CCCCTT
28._RB_47_[BRA]
CT_____ACCC___CCCCTT
29._RB_47_[BRA]
CT_____ACCC___CCCCTT
30._RB_47_[BRA]
CT_____ACCC___CCCCTT
31._RB_47_[BRA]
CT_____ACCC___CCCCTT
32._RB_47_[BRA]
CT_____ACCC___CCCCTT
33._RB_47_[BRA]
CT_____ACCC___CCCCTT
34._RB_47_[BRA]
CT_____ACCC___CCCCTT
35._RB_47_[BRA]
CT_____ACCC___CCCCTT
36._RB_47_[BRA]
CT_____ACCC___CCCCTT
37._RB_47_[BRA]
CT_____ACCC___CCCCTT
38._RB_47_[BRA]
CT_____ACCC___CCCCTT
39._RB_47_[BRA]
CT_____ACCC___CCCCTT
40._RB_47_[BRA]
______ACCC___CCCCTT
41._RB_47_[BRA]
CT_____ACCC___CCCC_
42._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
43._GC-05-101-3-03
CTCCGGCCACGGACCCCCAAACCCCCTT
44._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
45._RB_47_[BRA]
CT_____ACCC___CCCCTT
46._RB_47_[BRA]
CT_____ACCC___CCCCTT
47._RUQ_135
______ACCC__ACCC__
48._RUQ_135
CT_____ACCC___CCCCCT
49._RUQ_135
_______GG____CC_
50._GC-05-101-3-3
AGCCGGCCAC_AC_GGAAACGGGG_
 8586878889909192      
_Input profile
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
1._GC-05-161-4-14
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
2._GC-05-101-3-03
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
3._GC-05-101-3-03
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
4._GC-05-101-3-03
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
5._GC-05-161-4-14
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
6._GC-05-161-4-14
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
7._GC-05-161-4-14
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
8._GC-05-161-4-14
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
9._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
10._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
11._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
12._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
13._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
14._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
15._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
16._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
17._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
18._GC-05-101-3-03
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
19._GC-05-161-4-14
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
20._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
21._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
22._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
23._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
24._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
25._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
26._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
27._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
28._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
29._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
30._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
31._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
32._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
33._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
34._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
35._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
36._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
37._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
38._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
39._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
40._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
41._RB_47_[BRA]
___CTGGCC__X_XX_XX_XX_XX_XX_X
42._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
43._GC-05-101-3-03
_AACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
44._GC-08-065-1-87
TTAACCCTGGCTTTGGX_XX_XX_XX_XX_XX_X
45._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
46._RB_47_[BRA]
_AA_CTGGCT__X_XX_XX_XX_XX_XX_X
47._RUQ_135
_AACCCTGG___X_XX_XX_XX_XX_XX_X
48._RUQ_135
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
49._RUQ_135
________X_XX_XX_XX_XX_XX_X
50._GC-05-101-3-3
AA__AGCCGGAAGGX_XX_XX_XX_XX_XX_X

Input profile: RB_47_[BRA] GC-08-065-1-87

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

1._RB_47_[BRA] GC-05-161-4-14

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

2._RB_47_[BRA] GC-05-101-3-03

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

3._RB_47_[BRA] GC-05-101-3-03

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

4._RB_47_[BRA] GC-05-101-3-03

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

5._RB_47_[BRA] GC-05-161-4-14

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

6._RB_47_[BRA] GC-05-161-4-14

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

7._RB_47_[BRA] GC-05-161-4-14

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

8._RB_47_[BRA] GC-05-161-4-14

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

9._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

10._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

11._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

12._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

13._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

14._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

15._RB_47_[BRA] GC-08-065-1-87

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

16._RB_47_[BRA] GC-08-065-1-87

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

17._RB_47_[BRA] GC-08-065-1-87

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

18._RB_47_[BRA] GC-05-101-3-03

identical
90 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

19._RB_47_[BRA] GC-05-161-4-14

identical
90 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

20._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 11
 Dapeng Zhang, 2016

21._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 9
 Dapeng Zhang, 2016

22._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

23._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 3
 Dapeng Zhang, 2016

24._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 4
 Dapeng Zhang, 2016

25._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

26._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 3
 Dapeng Zhang, 2016

27._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 4
 Dapeng Zhang, 2016

28._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 5
 Dapeng Zhang, 2016

29._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 1 > FP
 Dapeng Zhang, 2016

30._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 1
 Dapeng Zhang, 2016

31._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 2
 Dapeng Zhang, 2016

32._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 3
 Dapeng Zhang, 2016

33._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 4
 Dapeng Zhang, 2016

34._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 5
 Dapeng Zhang, 2016

35._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 6
 Dapeng Zhang, 2016

36._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 7
 Dapeng Zhang, 2016

37._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 8
 Dapeng Zhang, 2016

38._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 10
 Dapeng Zhang, 2016

39._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 5
 Dapeng Zhang, 2016

40._RB_47_[BRA]

identical
37 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

41._RB_47_[BRA]

identical
30 shared markers

 View  View all  Clone  Any
Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

42._RB_47_[BRA] GC-08-065-1-87

99.5 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

43._RB_47_[BRA] GC-05-101-3-03

99.5 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP3
 Mars, 2018

44._RB_47_[BRA] GC-08-065-1-87

99.4 %
90 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

45._RB_47_[BRA]

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 2 > FP
 Dapeng Zhang, 2016

46._RB_47_[BRA]

98.7 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 12
 Dapeng Zhang, 2016

47._RB_47_[BRA] RUQ_135

96.3 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

48._RB_47_[BRA] RUQ_135

94.9 %
39 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

49._RB_47_[BRA] RUQ_135

83.3 %
24 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

50._RB_47_[BRA] GC-05-101-3-3

49.4 %
77 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 3, Rep: 3, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP776 53TcSNP1309 54TcSNP151 55TcSNP1520
56TcSNP799 57TcSNP899 58TcSNP226 59TcSNP1439 60TcSNP1442
61TcSNP25 62TcSNP364 63TcSNP144 64TcSNP230 65TcSNP560
66TcSNP723 67TcSNP731 68TcSNP701 69TcSNP1041 70TcSNP645
71TcSNP917 72Tcm003s01336581 73Tcm003s07402719 74Tcm001s00947643 75Tcm006s26664133
76Tcm002s20575712 77TcSNP529 78TcSNP1458 79TcSNP60 80TcSNP430
81TcSNP823 82TcSNP619 83TcSNP994 84TcSNP1144 85TcSNP1156
86TcSNP469 87TcSNP999 88TcSNP242 89TcSNP1253 90TcSNP1414
91TcSNP154 92TcSNP240