SNP Profiles of POUND 25 /A   View Data

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 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAAACCCCGGAATTCCCTTTGGTTTTTT
1._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
2._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
3._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
4._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
5._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
6._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
7._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
8._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
9._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
10._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
11._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
12._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
13._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
14._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
15._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
16._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTT__TTTTTT
17._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
18._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
19._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
20._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
21._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
22._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
23._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
24._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
25._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
26._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
27._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
28._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
29._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
30._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
31._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
32._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
33._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
34._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
35._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
36._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
37._RB_47_[BRA]___
AAAACCCC________CTTT____TT__
38._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
39._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
40._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
41._RB_47_[BRA]___
AAAACCCC__________TTGG__TT__
42._RB_47_[BRA]___
AAAACCCCGGAACTCCCTTTGGTTTTTT
43._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
44._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
45._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
46._RB_47_[BRA]___
____CCCC____CC________TTTT__
47._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
48._RB_47_[BRA]___
AAAACCCC________CTCTAG__TT__
49._RB_47_[BRA]___
______CC________CT______TT__
50._RB_47_[BRA]___
AAAA__CCGGAA__GGAG__GGAAAAAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTCCAAGGGGCCCGCCAATTGGAAAAGG
1._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
2._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
3._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
4._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
5._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
6._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
7._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
8._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
9._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
10._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
11._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
12._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
13._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
14._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
15._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
16._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
17._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
18._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
19._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
20._RB_47_[BRA]___
______GG____CG________AAAA__
21._RB_47_[BRA]___
______GG____CG________AAAA__
22._RB_47_[BRA]___
______GG____CG________AAAA__
23._RB_47_[BRA]___
______GG____CG________AAAA__
24._RB_47_[BRA]___
______GG____CG________AAAA__
25._RB_47_[BRA]___
______GG____CG________AAAA__
26._RB_47_[BRA]___
______GG____CG________AAAA__
27._RB_47_[BRA]___
______GG____CG________AAAA__
28._RB_47_[BRA]___
______GG____CG________AAAA__
29._RB_47_[BRA]___
______GG____CG________AAAA__
30._RB_47_[BRA]___
______GG____CG________AAAA__
31._RB_47_[BRA]___
______GG____CG________AAAA__
32._RB_47_[BRA]___
______GG____CG________AAAA__
33._RB_47_[BRA]___
______GG____CG________AAAA__
34._RB_47_[BRA]___
______GG____CG________AAAA__
35._RB_47_[BRA]___
______GG____CG________AAAA__
36._RB_47_[BRA]___
______GG____CG________AAAA__
37._RB_47_[BRA]___
______GG____CG________AAAA__
38._RB_47_[BRA]___
______GG____CG________AAAA__
39._RB_47_[BRA]___
______GG____CG________AAAA__
40._RB_47_[BRA]___
______GG____CG________AAAA__
41._RB_47_[BRA]___
______GG____CG________AAAA__
42._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
43._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
44._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
45._RB_47_[BRA]___
______GG____CG________AAAA__
46._RB_47_[BRA]___
__________CC________GG__AAGG
47._RB_47_[BRA]___
______GG____CG________AAAA__
48._RB_47_[BRA]___
______GG____CG________AAAA__
49._RB_47_[BRA]___
____AA____GG__CC____GG__AAGG
50._RB_47_[BRA]___
AACCAAGGCC__CGGGAAAAGGAAAACC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGAATTGGGGGGCCAAGGGGGGAACCGG
1._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
2._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
3._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
4._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
5._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
6._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
7._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
8._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
9._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
10._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
11._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
12._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
13._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
14._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
15._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
16._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
17._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
18._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGG__AACCGG
19._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGG__AACCGG
20._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
21._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
22._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
23._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
24._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
25._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
26._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
27._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
28._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
29._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
30._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
31._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
32._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
33._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
34._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
35._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
36._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
37._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
38._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
39._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
40._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
41._RB_47_[BRA]___
GG________GG____GG__________
42._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGGGAACCGG
43._RB_47_[BRA]___
GGATTTGGGGGGCCAAGGGGGGAACCGG
44._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGG__AACCGG
45._RB_47_[BRA]___
GGAT______GG__AAGG____AA____
46._RB_47_[BRA]___
GG______GGGGCCAAGG____AACC__
47._RB_47_[BRA]___
GGAA______GG__AAGG____AA____
48._RB_47_[BRA]___
GGAA______GG__AAGG____AG____
49._RB_47_[BRA]___
CC______GGGG________GG__CC__
50._RB_47_[BRA]___
CCAAAACCGGGGCCAACCCCCCAAGGGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
CCGTTTTTAAAGAACCCCGGAAGGCCCC
1._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
2._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
3._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
4._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
5._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
6._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
7._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
8._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
9._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
10._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
11._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
12._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
13._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
14._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
15._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
16._RB_47_[BRA]___
CCGTTTTTAAAGAACC__GGAAGGCCCC
17._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGG__CC
18._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
19._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGG__GGCCCC
20._RB_47_[BRA]___
______TT________________CCCC
21._RB_47_[BRA]___
______TT________________CCCC
22._RB_47_[BRA]___
______TT________________CCCC
23._RB_47_[BRA]___
______TT________________CCCC
24._RB_47_[BRA]___
______TT________________CCCC
25._RB_47_[BRA]___
______TT________________CCCC
26._RB_47_[BRA]___
______TT________________CCCC
27._RB_47_[BRA]___
______TT________________CCCC
28._RB_47_[BRA]___
______TT________________CCCC
29._RB_47_[BRA]___
______TT________________CCCC
30._RB_47_[BRA]___
______TT________________CCCC
31._RB_47_[BRA]___
______TT________________CCCC
32._RB_47_[BRA]___
______TT________________CCCC
33._RB_47_[BRA]___
______TT________________CCCC
34._RB_47_[BRA]___
______TT________________CCCC
35._RB_47_[BRA]___
______TT________________CCCC
36._RB_47_[BRA]___
______TT________________CCCC
37._RB_47_[BRA]___
______TT________________CCCC
38._RB_47_[BRA]___
______TT________________CCCC
39._RB_47_[BRA]___
______TT________________CCCC
40._RB_47_[BRA]___
______TT__________________CC
41._RB_47_[BRA]___
______TT________________CC__
42._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
43._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAAGGCCCC
44._RB_47_[BRA]___
CCGTTTTTAAAGAACCCCGGAA__CCCC
45._RB_47_[BRA]___
______TT________________CCCC
46._RB_47_[BRA]___
__GTTT____AG____________CC__
47._RB_47_[BRA]___
______TT________________CCCC
48._RB_47_[BRA]___
______TT________________CCCC
49._RB_47_[BRA]___
____TT__AA______________CC__
50._RB_47_[BRA]___
GGAC__AA__AGAAGG__GGAACCGGGG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
TTGGGGCCCCCCGGGGACAAGGGGAACC
1._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
2._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
3._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
4._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
5._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
6._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
7._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
8._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
9._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
10._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
11._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
12._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
13._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
14._RB_47_[BRA]___
TTGGGGCCCC__GGGGACAAGGGGAACC
15._RB_47_[BRA]___
TTGGGGCCCCCCGGGGAC__GGGGAACC
16._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
17._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
18._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
19._RB_47_[BRA]___
TTGGGGCCCC__GGGGACAAGGGGAACC
20._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
21._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
22._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
23._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
24._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
25._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
26._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
27._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
28._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
29._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
30._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
31._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
32._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
33._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
34._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
35._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
36._RB_47_[BRA]___
____GG__CCCCGG__AC__GGGG____
37._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
38._RB_47_[BRA]___
____GG__CC__GG__ACAAGGGG____
39._RB_47_[BRA]___
____GG__CC__GG__ACAAGGGG____
40._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
41._RB_47_[BRA]___
________CCCCGG__ACAA__GG____
42._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
43._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
44._RB_47_[BRA]___
TTGG__CCCCACGGGGACAAGGGGAACC
45._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
46._RB_47_[BRA]___
TT__GGCCCCCC__GGACAAGGGGAA__
47._RB_47_[BRA]___
________CCACGG__ACAAGGGG____
48._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
49._RB_47_[BRA]___
____CCCC__CC__GGACAA________
50._RB_47_[BRA]___
AAGGCCGGGGCCGGGGACAACCCCAA__
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CGAACTCCGGCCACGGACCCCCAAACCC
1._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
2._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
3._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
4._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
5._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
6._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
7._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
8._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
9._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
10._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
11._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
12._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
13._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
14._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
15._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
16._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
17._RB_47_[BRA]___
CGAA__CCGGCCACGGACCCCCAAACCC
18._RB_47_[BRA]___
CGAACT__GGCCACGGACCCCCAAACCC
19._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
20._RB_47_[BRA]___
__AACT__________ACCC______CC
21._RB_47_[BRA]___
__AACT__________ACCC______CC
22._RB_47_[BRA]___
__AACT__________ACCC______CC
23._RB_47_[BRA]___
__AACT__________ACCC______CC
24._RB_47_[BRA]___
__AACT__________ACCC______CC
25._RB_47_[BRA]___
__AACT__________ACCC______CC
26._RB_47_[BRA]___
__AACT__________ACCC______CC
27._RB_47_[BRA]___
__AACT__________ACCC______CC
28._RB_47_[BRA]___
__AACT__________ACCC______CC
29._RB_47_[BRA]___
__AACT__________ACCC______CC
30._RB_47_[BRA]___
__AACT__________ACCC______CC
31._RB_47_[BRA]___
__AACT__________ACCC______CC
32._RB_47_[BRA]___
__AACT__________ACCC______CC
33._RB_47_[BRA]___
__AACT__________ACCC______CC
34._RB_47_[BRA]___
__AACT__________ACCC______CC
35._RB_47_[BRA]___
__AACT__________ACCC______CC
36._RB_47_[BRA]___
__AACT__________ACCC______CC
37._RB_47_[BRA]___
__AACT__________ACCC______CC
38._RB_47_[BRA]___
__AACT__________ACCC______CC
39._RB_47_[BRA]___
__AACT__________ACCC______CC
40._RB_47_[BRA]___
__AA____________ACCC______CC
41._RB_47_[BRA]___
__AACT__________ACCC______CC
42._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
43._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
44._RB_47_[BRA]___
CGAACTCCGGCCACGGACCCCCAAACCC
45._RB_47_[BRA]___
__AACT__________ACCC______CC
46._RB_47_[BRA]___
________________ACCC____ACCC
47._RB_47_[BRA]___
__AACT__________ACCC______CC
48._RB_47_[BRA]___
__AACT__________ACCC______CC
49._RB_47_[BRA]___
CG________________GG________
50._RB_47_[BRA]___
____AGCCGGCCAC__AC__GGAAACGG
 85 86 87 88 89 90 91 92 93 94     
_Input profile
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
1._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
2._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
3._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
4._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
5._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
6._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
7._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
8._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
9._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
10._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
11._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
12._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
13._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
14._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
15._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
16._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
17._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
18._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
19._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
20._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
21._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
22._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
23._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
24._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
25._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
26._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
27._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
28._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
29._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
30._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
31._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
32._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
33._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
34._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
35._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
36._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
37._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
38._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
39._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
40._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
41._RB_47_[BRA]___
CC________CTGGCC____X_XX_XX_XX_X
42._RB_47_[BRA]___
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
43._RB_47_[BRA]___
CCTT__AACCCTGGCCTTGGX_XX_XX_XX_X
44._RB_47_[BRA]___
CCTTTTAACCCTGGCTTTGGX_XX_XX_XX_X
45._RB_47_[BRA]___
CCTT__AA__CTGGCC____X_XX_XX_XX_X
46._RB_47_[BRA]___
______AACCCTGG______X_XX_XX_XX_X
47._RB_47_[BRA]___
CCTT__AA__CTGGCT____X_XX_XX_XX_X
48._RB_47_[BRA]___
CCCT__AA__CTGGCC____X_XX_XX_XX_X
49._RB_47_[BRA]___
CC__________________X_XX_XX_XX_X
50._RB_47_[BRA]___
GG__AA____AGCCGGAAGGX_XX_XX_XX_X

Input profile: RB_47_[BRA] GC-08-065-1-87

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

1._RB_47_[BRA] GC-05-161-4-14

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

2._RB_47_[BRA] GC-05-101-3-03

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

3._RB_47_[BRA] GC-05-101-3-03

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

4._RB_47_[BRA] GC-05-101-3-03

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

5._RB_47_[BRA] GC-05-161-4-14

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

6._RB_47_[BRA] GC-05-161-4-14

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

7._RB_47_[BRA] GC-05-161-4-14

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

8._RB_47_[BRA] GC-05-161-4-14

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

9._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

10._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

11._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

12._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

13._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

14._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

15._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

16._RB_47_[BRA] GC-05-101-3-03

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

17._RB_47_[BRA] GC-05-161-4-14

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

18._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

19._RB_47_[BRA] GC-08-065-1-87

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

20._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 11
 Dapeng Zhang, 2016

21._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 9
 Dapeng Zhang, 2016

22._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 1
 Dapeng Zhang, 2016

23._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 3
 Dapeng Zhang, 2016

24._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 4
 Dapeng Zhang, 2016

25._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

26._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 3
 Dapeng Zhang, 2016

27._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 4
 Dapeng Zhang, 2016

28._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 5
 Dapeng Zhang, 2016

29._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 1 > FP
 Dapeng Zhang, 2016

30._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 3
 Dapeng Zhang, 2016

31._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 4
 Dapeng Zhang, 2016

32._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 5
 Dapeng Zhang, 2016

33._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 6
 Dapeng Zhang, 2016

34._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 7
 Dapeng Zhang, 2016

35._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 8
 Dapeng Zhang, 2016

36._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 10
 Dapeng Zhang, 2016

37._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 5
 Dapeng Zhang, 2016

38._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 1
 Dapeng Zhang, 2016

39._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 2
 Dapeng Zhang, 2016

40._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

41._RB_47_[BRA]

identical
31 shared markers

 View  View all  Clone  Any
Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

42._RB_47_[BRA] GC-08-065-1-87

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

43._RB_47_[BRA] GC-05-101-3-03

99.5 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP3
 Mars, 2018

44._RB_47_[BRA] GC-08-065-1-87

98.9 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

45._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 2 > FP
 Dapeng Zhang, 2016

46._RB_47_[BRA] RUQ_135

97.5 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

47._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 12
 Dapeng Zhang, 2016

48._RB_47_[BRA] RUQ_135

95 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

49._RB_47_[BRA] RUQ_135

84.6 %
26 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

50._RB_47_[BRA] GC-05-101-3-3

50.6 %
79 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 3, Rep: 3, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP823 84TcSNP619 85TcSNP994
86TcSNP1144 87TcSNP1156 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1253 92TcSNP1414 93TcSNP154 94TcSNP240