SNP Profiles of RB 47 [BRA]   View Data

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 Key

 1234567891011121314
_Input profile
AAAACCCCGGAATTCCCTTTGGTTTTTT
1._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
2._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
3._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
4._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
5._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
6._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
7._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
8._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
9._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
10._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
11._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
12._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
13._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
14._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
15._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
16._GC-05-101-3-03
AAAACCCCGGAATTCCCTTT_TTTTTT
17._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
18._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
19._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
20._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
21._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
22._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
23._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
24._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
25._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
26._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
27._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
28._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
29._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
30._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
31._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
32._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
33._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
34._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
35._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
36._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
37._RB_47_[BRA]
AAAACCCC____CTTT__TT_
38._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
39._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
40._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
41._RB_47_[BRA]
AAAACCCC_____TTGG_TT_
42._GC-08-065-1-87
AAAACCCCGGAACTCCCTTTGGTTTTTT
43._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
44._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
45._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
46._RUQ_135
__CCCC__CC_-__TTTT_
47._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
48._RUQ_135
AAAACCCC____CTCTAG_TT_
49._RUQ_135
___CC____CT___TT_
50._GC-05-101-3-3
AAAA_CCGGAA_GGAG_GGAAAAAA
 1516171819202122232425262728
_Input profile
TTCCAAGGGGCCCGCCAATTGGAAAAGG
1._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
2._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
3._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
4._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
5._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
6._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
7._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
8._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
9._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
10._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
11._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
12._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
13._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
14._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
15._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
16._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
17._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
18._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
19._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
20._RB_47_[BRA]
___GG__CG____AAAA_
21._RB_47_[BRA]
___GG__CG____AAAA_
22._RB_47_[BRA]
___GG__CG____AAAA_
23._RB_47_[BRA]
___GG__CG____AAAA_
24._RB_47_[BRA]
___GG__CG____AAAA_
25._RB_47_[BRA]
___GG__CG____AAAA_
26._RB_47_[BRA]
___GG__CG____AAAA_
27._RB_47_[BRA]
___GG__CG____AAAA_
28._RB_47_[BRA]
___GG__CG____AAAA_
29._RB_47_[BRA]
___GG__CG____AAAA_
30._RB_47_[BRA]
___GG__CG____AAAA_
31._RB_47_[BRA]
___GG__CG____AAAA_
32._RB_47_[BRA]
___GG__CG____AAAA_
33._RB_47_[BRA]
___GG__CG____AAAA_
34._RB_47_[BRA]
___GG__CG____AAAA_
35._RB_47_[BRA]
___GG__CG____AAAA_
36._RB_47_[BRA]
___GG__CG____AAAA_
37._RB_47_[BRA]
___GG__CG____AAAA_
38._RB_47_[BRA]
___GG__CG____AAAA_
39._RB_47_[BRA]
___GG__CG____AAAA_
40._RB_47_[BRA]
___GG__CG____AAAA_
41._RB_47_[BRA]
___GG__CG____AAAA_
42._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
43._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
44._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
45._RB_47_[BRA]
___GG__CG____AAAA_
46._RUQ_135
_____CC____GG_AAGG
47._RB_47_[BRA]
___GG__CG____AAAA_
48._RUQ_135
___GG__CG____AAAA_
49._RUQ_135
__AA__GG_CC__GG_AAGG
50._GC-05-101-3-3
AACCAAGGCC_CGGGAAAAGGAAAACC
 2930313233343536373839404142
_Input profile
GGAATTGGGGGGCCAAGGGGGGAACCGG
1._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
2._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
3._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
4._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
5._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
6._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
7._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
8._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
9._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
10._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
11._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
12._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
13._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
14._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
15._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
16._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
17._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
18._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG_AACCGG
19._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG_AACCGG
20._RB_47_[BRA]
GGAA___GG_AAGG__AA__
21._RB_47_[BRA]
GGAA___GG_AAGG__AA__
22._RB_47_[BRA]
GGAA___GG_AAGG__AA__
23._RB_47_[BRA]
GGAA___GG_AAGG__AA__
24._RB_47_[BRA]
GGAA___GG_AAGG__AA__
25._RB_47_[BRA]
GGAA___GG_AAGG__AA__
26._RB_47_[BRA]
GGAA___GG_AAGG__AA__
27._RB_47_[BRA]
GGAA___GG_AAGG__AA__
28._RB_47_[BRA]
GGAA___GG_AAGG__AA__
29._RB_47_[BRA]
GGAA___GG_AAGG__AA__
30._RB_47_[BRA]
GGAA___GG_AAGG__AA__
31._RB_47_[BRA]
GGAA___GG_AAGG__AA__
32._RB_47_[BRA]
GGAA___GG_AAGG__AA__
33._RB_47_[BRA]
GGAA___GG_AAGG__AA__
34._RB_47_[BRA]
GGAA___GG_AAGG__AA__
35._RB_47_[BRA]
GGAA___GG_AAGG__AA__
36._RB_47_[BRA]
GGAA___GG_AAGG__AA__
37._RB_47_[BRA]
GGAA___GG_AAGG__AA__
38._RB_47_[BRA]
GGAA___GG_AAGG__AA__
39._RB_47_[BRA]
GGAA___GG_AAGG__AA__
40._RB_47_[BRA]
GGAA___GG_AAGG__AA__
41._RB_47_[BRA]
GG____GG__GG_____
42._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
43._GC-05-101-3-03
GGATTTGGGGGGCCAAGGGGGGAACCGG
44._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG_AACCGG
45._RB_47_[BRA]
GGAT___GG_AAGG__AA__
46._RUQ_135
GG___GGGGCCAAGG__AACC_
47._RB_47_[BRA]
GGAA___GG_AAGG__AA__
48._RUQ_135
GGAA___GG_AAGG__AG__
49._RUQ_135
CC___GGGG____GG_CC_
50._GC-05-101-3-3
CCAAAACCGGGGCCAACCCCCCAAGGGG
 4344454647484950515253545556
_Input profile
CCGTTTTTAAAGAACCCCGGAAGGCCCC
1._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGCCCC
2._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGCCCC
3._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGCCCC
4._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGCCCC
5._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGCCCC
6._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGCCCC
7._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGCCCC
8._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGCCCC
9._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGCCCC
10._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGCCCC
11._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGCCCC
12._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGCCCC
13._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGCCCC
14._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGCCCC
15._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGCCCC
16._GC-05-101-3-03
CCGTTTTTAAAGAACC_GGAAGGCCCC
17._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGG_CC
18._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGCCCC
19._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGG_GGCCCC
20._RB_47_[BRA]
___TT________CCCC
21._RB_47_[BRA]
___TT________CCCC
22._RB_47_[BRA]
___TT________CCCC
23._RB_47_[BRA]
___TT________CCCC
24._RB_47_[BRA]
___TT________CCCC
25._RB_47_[BRA]
___TT________CCCC
26._RB_47_[BRA]
___TT________CCCC
27._RB_47_[BRA]
___TT________CCCC
28._RB_47_[BRA]
___TT________CCCC
29._RB_47_[BRA]
___TT________CCCC
30._RB_47_[BRA]
___TT________CCCC
31._RB_47_[BRA]
___TT________CCCC
32._RB_47_[BRA]
___TT________CCCC
33._RB_47_[BRA]
___TT________CCCC
34._RB_47_[BRA]
___TT________CCCC
35._RB_47_[BRA]
___TT________CCCC
36._RB_47_[BRA]
___TT________CCCC
37._RB_47_[BRA]
___TT________CCCC
38._RB_47_[BRA]
___TT________CCCC
39._RB_47_[BRA]
___TT________CCCC
40._RB_47_[BRA]
___TT_________CC
41._RB_47_[BRA]
___TT________CC_
42._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGCCCC
43._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGCCCC
44._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAA_CCCC
45._RB_47_[BRA]
___TT________CCCC
46._RUQ_135
_GTTT__AG______CC_
47._RB_47_[BRA]
___TT________CCCC
48._RUQ_135
___TT________CCCC
49._RUQ_135
__TT_AA_______CC_
50._GC-05-101-3-3
GGAC_AA_AGAAGG_GGAACCGGGG
 5758596061626364656667686970
_Input profile
TTGGGGCCCCCCGGGGACAAGGGGAACC
1._GC-05-161-4-14
TTGGGGCCCCCCGGGGACAAGGGGAACC
2._GC-05-101-3-03
TTGGGGCCCCCCGGGGACAAGGGGAACC
3._GC-05-101-3-03
TTGGGGCCCCCCGGGGACAAGGGGAACC
4._GC-05-101-3-03
TTGGGGCCCCCCGGGGACAAGGGGAACC
5._GC-05-161-4-14
TTGGGGCCCCCCGGGGACAAGGGGAACC
6._GC-05-161-4-14
TTGGGGCCCCCCGGGGACAAGGGGAACC
7._GC-05-161-4-14
TTGGGGCCCCCCGGGGACAAGGGGAACC
8._GC-05-161-4-14
TTGGGGCCCCCCGGGGACAAGGGGAACC
9._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
10._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
11._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
12._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
13._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
14._GC-08-065-1-87
TTGGGGCCCC_GGGGACAAGGGGAACC
15._GC-08-065-1-87
TTGGGGCCCCCCGGGGAC_GGGGAACC
16._GC-05-101-3-03
TTGGGGCCCCCCGGGGACAAGGGGAACC
17._GC-05-161-4-14
TTGGGGCCCCCCGGGGACAAGGGGAACC
18._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
19._GC-08-065-1-87
TTGGGGCCCC_GGGGACAAGGGGAACC
20._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
21._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
22._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
23._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
24._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
25._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
26._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
27._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
28._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
29._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
30._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
31._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
32._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
33._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
34._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
35._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
36._RB_47_[BRA]
__GG_CCCCGG_AC_GGGG__
37._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
38._RB_47_[BRA]
__GG_CC_GG_ACAAGGGG__
39._RB_47_[BRA]
__GG_CC_GG_ACAAGGGG__
40._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
41._RB_47_[BRA]
____CCCCGG_ACAA_GG__
42._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
43._GC-05-101-3-03
TTGGGGCCCCCCGGGGACAAGGGGAACC
44._GC-08-065-1-87
TTGG_CCCCACGGGGACAAGGGGAACC
45._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
46._RUQ_135
TT-GGCCCCCC_GGACAAGGGGAA_
47._RB_47_[BRA]
____CCACGG_ACAAGGGG__
48._RUQ_135
__GG_CCCCGG_ACAAGGGG__
49._RUQ_135
__CCCC_CC_GGACAA____
50._GC-05-101-3-3
AAGGCCGGGGCCGGGGACAACCCCAA_
 7172737475767778798081828384
_Input profile
CGAACTCCGGCCACGGACCCCCAAACCC
1._GC-05-161-4-14
CGAACTCCGGCCACGGACCCCCAAACCC
2._GC-05-101-3-03
CGAACTCCGGCCACGGACCCCCAAACCC
3._GC-05-101-3-03
CGAACTCCGGCCACGGACCCCCAAACCC
4._GC-05-101-3-03
CGAACTCCGGCCACGGACCCCCAAACCC
5._GC-05-161-4-14
CGAACTCCGGCCACGGACCCCCAAACCC
6._GC-05-161-4-14
CGAACTCCGGCCACGGACCCCCAAACCC
7._GC-05-161-4-14
CGAACTCCGGCCACGGACCCCCAAACCC
8._GC-05-161-4-14
CGAACTCCGGCCACGGACCCCCAAACCC
9._GC-08-065-1-87
CGAACTCCGGCCACGGACCCCCAAACCC
10._GC-08-065-1-87
CGAACTCCGGCCACGGACCCCCAAACCC
11._GC-08-065-1-87
CGAACTCCGGCCACGGACCCCCAAACCC
12._GC-08-065-1-87
CGAACTCCGGCCACGGACCCCCAAACCC
13._GC-08-065-1-87
CGAACTCCGGCCACGGACCCCCAAACCC
14._GC-08-065-1-87
CGAACTCCGGCCACGGACCCCCAAACCC
15._GC-08-065-1-87
CGAACTCCGGCCACGGACCCCCAAACCC
16._GC-05-101-3-03
CGAACTCCGGCCACGGACCCCCAAACCC
17._GC-05-161-4-14
CGAA_CCGGCCACGGACCCCCAAACCC
18._GC-08-065-1-87
CGAACT_GGCCACGGACCCCCAAACCC
19._GC-08-065-1-87
CGAACTCCGGCCACGGACCCCCAAACCC
20._RB_47_[BRA]
_AACT_____ACCC___CC
21._RB_47_[BRA]
_AACT_____ACCC___CC
22._RB_47_[BRA]
_AACT_____ACCC___CC
23._RB_47_[BRA]
_AACT_____ACCC___CC
24._RB_47_[BRA]
_AACT_____ACCC___CC
25._RB_47_[BRA]
_AACT_____ACCC___CC
26._RB_47_[BRA]
_AACT_____ACCC___CC
27._RB_47_[BRA]
_AACT_____ACCC___CC
28._RB_47_[BRA]
_AACT_____ACCC___CC
29._RB_47_[BRA]
_AACT_____ACCC___CC
30._RB_47_[BRA]
_AACT_____ACCC___CC
31._RB_47_[BRA]
_AACT_____ACCC___CC
32._RB_47_[BRA]
_AACT_____ACCC___CC
33._RB_47_[BRA]
_AACT_____ACCC___CC
34._RB_47_[BRA]
_AACT_____ACCC___CC
35._RB_47_[BRA]
_AACT_____ACCC___CC
36._RB_47_[BRA]
_AACT_____ACCC___CC
37._RB_47_[BRA]
_AACT_____ACCC___CC
38._RB_47_[BRA]
_AACT_____ACCC___CC
39._RB_47_[BRA]
_AACT_____ACCC___CC
40._RB_47_[BRA]
_AA______ACCC___CC
41._RB_47_[BRA]
_AACT_____ACCC___CC
42._GC-08-065-1-87
CGAACTCCGGCCACGGACCCCCAAACCC
43._GC-05-101-3-03
CGAACTCCGGCCACGGACCCCCAAACCC
44._GC-08-065-1-87
CGAACTCCGGCCACGGACCCCCAAACCC
45._RB_47_[BRA]
_AACT_____ACCC___CC
46._RUQ_135
________ACCC__ACCC
47._RB_47_[BRA]
_AACT_____ACCC___CC
48._RUQ_135
_AACT_____ACCC___CC
49._RUQ_135
CG________GG____
50._GC-05-101-3-3
__AGCCGGCCAC_AC_GGAAACGG
 85868788899091929394    
_Input profile
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
1._GC-05-161-4-14
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
2._GC-05-101-3-03
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
3._GC-05-101-3-03
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
4._GC-05-101-3-03
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
5._GC-05-161-4-14
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
6._GC-05-161-4-14
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
7._GC-05-161-4-14
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
8._GC-05-161-4-14
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
9._GC-08-065-1-87
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
10._GC-08-065-1-87
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
11._GC-08-065-1-87
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
12._GC-08-065-1-87
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
13._GC-08-065-1-87
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
14._GC-08-065-1-87
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
15._GC-08-065-1-87
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
16._GC-05-101-3-03
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
17._GC-05-161-4-14
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
18._GC-08-065-1-87
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
19._GC-08-065-1-87
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
20._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
21._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
22._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
23._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
24._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
25._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
26._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
27._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
28._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
29._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
30._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
31._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
32._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
33._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
34._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
35._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
36._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
37._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
38._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
39._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
40._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
41._RB_47_[BRA]
CC____CTGGCC__X_XX_XX_XX_X
42._GC-08-065-1-87
CCTTTTAACCCTGGCCTTGGX_XX_XX_XX_X
43._GC-05-101-3-03
CCTT_AACCCTGGCCTTGGX_XX_XX_XX_X
44._GC-08-065-1-87
CCTTTTAACCCTGGCTTTGGX_XX_XX_XX_X
45._RB_47_[BRA]
CCTT_AA_CTGGCC__X_XX_XX_XX_X
46._RUQ_135
___AACCCTGG___X_XX_XX_XX_X
47._RB_47_[BRA]
CCTT_AA_CTGGCT__X_XX_XX_XX_X
48._RUQ_135
CCCT_AA_CTGGCC__X_XX_XX_XX_X
49._RUQ_135
CC_________X_XX_XX_XX_X
50._GC-05-101-3-3
GG_AA__AGCCGGAAGGX_XX_XX_XX_X

Input profile: RB_47_[BRA] GC-08-065-1-87

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

1._RB_47_[BRA] GC-05-161-4-14

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

2._RB_47_[BRA] GC-05-101-3-03

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

3._RB_47_[BRA] GC-05-101-3-03

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

4._RB_47_[BRA] GC-05-101-3-03

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

5._RB_47_[BRA] GC-05-161-4-14

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

6._RB_47_[BRA] GC-05-161-4-14

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

7._RB_47_[BRA] GC-05-161-4-14

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

8._RB_47_[BRA] GC-05-161-4-14

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

9._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

10._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

11._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

12._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

13._RB_47_[BRA] GC-08-065-1-87

identical
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

14._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

15._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

16._RB_47_[BRA] GC-05-101-3-03

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

17._RB_47_[BRA] GC-05-161-4-14

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

18._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

19._RB_47_[BRA] GC-08-065-1-87

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

20._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 11
 Dapeng Zhang, 2016

21._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 9
 Dapeng Zhang, 2016

22._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

23._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 3
 Dapeng Zhang, 2016

24._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 4
 Dapeng Zhang, 2016

25._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

26._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 3
 Dapeng Zhang, 2016

27._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 4
 Dapeng Zhang, 2016

28._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 5
 Dapeng Zhang, 2016

29._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 1 > FP
 Dapeng Zhang, 2016

30._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 3
 Dapeng Zhang, 2016

31._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 4
 Dapeng Zhang, 2016

32._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 5
 Dapeng Zhang, 2016

33._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 6
 Dapeng Zhang, 2016

34._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 7
 Dapeng Zhang, 2016

35._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 8
 Dapeng Zhang, 2016

36._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 10
 Dapeng Zhang, 2016

37._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 5
 Dapeng Zhang, 2016

38._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 1
 Dapeng Zhang, 2016

39._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 2
 Dapeng Zhang, 2016

40._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

41._RB_47_[BRA]

identical
31 shared markers

 View  View all  Clone  Any
Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

42._RB_47_[BRA] GC-08-065-1-87

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

43._RB_47_[BRA] GC-05-101-3-03

99.5 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP3
 Mars, 2018

44._RB_47_[BRA] GC-08-065-1-87

98.9 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

45._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 2 > FP
 Dapeng Zhang, 2016

46._RB_47_[BRA] RUQ_135

97.5 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

47._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 12
 Dapeng Zhang, 2016

48._RB_47_[BRA] RUQ_135

95 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

49._RB_47_[BRA] RUQ_135

84.6 %
26 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

50._RB_47_[BRA] GC-05-101-3-3

50.6 %
79 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 3, Rep: 3, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP823 84TcSNP619 85TcSNP994
86TcSNP1144 87TcSNP1156 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1253 92TcSNP1414 93TcSNP154 94TcSNP240