SNP Profiles of RB 47 [BRA]   View Data

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 Key

 1234567891011121314
_Input profile
AAAACCCCGGAACTCCCTTTGGTTTTTT
1._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
2._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
3._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
4._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
5._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
6._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
7._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
8._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
9._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
10._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
11._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
12._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
13._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
14._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
15._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
16._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
17._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
18._RB_47_[BRA]
AAAACCCC____CTTT__TT_
19._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
20._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
21._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
22._RB_47_[BRA]
AAAACCCC_____TTGG_TT_
23._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
24._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
25._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
26._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
27._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
28._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
29._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
30._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
31._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
32._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
33._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
34._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
35._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
36._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
37._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
38._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
39._GC-05-101-3-03
AAAACCCCGGAATTCCCTTT_TTTTTT
40._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
41._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
42._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
43._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
44._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
45._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
46._RUQ_135
__CCCC__CC_-__TTTT_
47._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
48._RUQ_135
AAAACCCC____CTCTAG_TT_
49._RUQ_135
___CC____CT___TT_
50._GC-05-101-3-3
AAAA_CCGGAA_GGAG_GGAAAAAA
 1516171819202122232425262728
_Input profile
TTCCAAGGGGCCCGCCAATTGGAAAAGG
1._RB_47_[BRA]
___GG__CG____AAAA_
2._RB_47_[BRA]
___GG__CG____AAAA_
3._RB_47_[BRA]
___GG__CG____AAAA_
4._RB_47_[BRA]
___GG__CG____AAAA_
5._RB_47_[BRA]
___GG__CG____AAAA_
6._RB_47_[BRA]
___GG__CG____AAAA_
7._RB_47_[BRA]
___GG__CG____AAAA_
8._RB_47_[BRA]
___GG__CG____AAAA_
9._RB_47_[BRA]
___GG__CG____AAAA_
10._RB_47_[BRA]
___GG__CG____AAAA_
11._RB_47_[BRA]
___GG__CG____AAAA_
12._RB_47_[BRA]
___GG__CG____AAAA_
13._RB_47_[BRA]
___GG__CG____AAAA_
14._RB_47_[BRA]
___GG__CG____AAAA_
15._RB_47_[BRA]
___GG__CG____AAAA_
16._RB_47_[BRA]
___GG__CG____AAAA_
17._RB_47_[BRA]
___GG__CG____AAAA_
18._RB_47_[BRA]
___GG__CG____AAAA_
19._RB_47_[BRA]
___GG__CG____AAAA_
20._RB_47_[BRA]
___GG__CG____AAAA_
21._RB_47_[BRA]
___GG__CG____AAAA_
22._RB_47_[BRA]
___GG__CG____AAAA_
23._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
24._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
25._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
26._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
27._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
28._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
29._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
30._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
31._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
32._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
33._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
34._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
35._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
36._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
37._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
38._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
39._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
40._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
41._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
42._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
43._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
44._RB_47_[BRA]
___GG__CG____AAAA_
45._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
46._RUQ_135
_____CC____GG_AAGG
47._RB_47_[BRA]
___GG__CG____AAAA_
48._RUQ_135
___GG__CG____AAAA_
49._RUQ_135
__AA__GG_CC__GG_AAGG
50._GC-05-101-3-3
AACCAAGGCC_CGGGAAAAGGAAAACC
 2930313233343536373839404142
_Input profile
GGAATTGGGGGGCCAAGGGGGGAACCGG
1._RB_47_[BRA]
GGAA___GG_AAGG__AA__
2._RB_47_[BRA]
GGAA___GG_AAGG__AA__
3._RB_47_[BRA]
GGAA___GG_AAGG__AA__
4._RB_47_[BRA]
GGAA___GG_AAGG__AA__
5._RB_47_[BRA]
GGAA___GG_AAGG__AA__
6._RB_47_[BRA]
GGAA___GG_AAGG__AA__
7._RB_47_[BRA]
GGAA___GG_AAGG__AA__
8._RB_47_[BRA]
GGAA___GG_AAGG__AA__
9._RB_47_[BRA]
GGAA___GG_AAGG__AA__
10._RB_47_[BRA]
GGAA___GG_AAGG__AA__
11._RB_47_[BRA]
GGAA___GG_AAGG__AA__
12._RB_47_[BRA]
GGAA___GG_AAGG__AA__
13._RB_47_[BRA]
GGAA___GG_AAGG__AA__
14._RB_47_[BRA]
GGAA___GG_AAGG__AA__
15._RB_47_[BRA]
GGAA___GG_AAGG__AA__
16._RB_47_[BRA]
GGAA___GG_AAGG__AA__
17._RB_47_[BRA]
GGAA___GG_AAGG__AA__
18._RB_47_[BRA]
GGAA___GG_AAGG__AA__
19._RB_47_[BRA]
GGAA___GG_AAGG__AA__
20._RB_47_[BRA]
GGAA___GG_AAGG__AA__
21._RB_47_[BRA]
GGAA___GG_AAGG__AA__
22._RB_47_[BRA]
GG____GG__GG_____
23._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
24._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
25._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
26._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
27._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
28._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
29._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
30._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
31._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
32._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
33._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
34._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
35._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
36._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
37._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
38._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGGGAACCGG
39._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGGGAACCGG
40._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGGGAACCGG
41._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG_AACCGG
42._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG_AACCGG
43._GC-05-101-3-03
GGATTTGGGGGGCCAAGGGGGGAACCGG
44._RB_47_[BRA]
GGAT___GG_AAGG__AA__
45._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGG_AACCGG
46._RUQ_135
GG___GGGGCCAAGG__AACC_
47._RB_47_[BRA]
GGAA___GG_AAGG__AA__
48._RUQ_135
GGAA___GG_AAGG__AG__
49._RUQ_135
CC___GGGG____GG_CC_
50._GC-05-101-3-3
CCAAAACCGGGGCCAACCCCCCAAGGGG
 4344454647484950515253545556
_Input profile
CCGTTTTTAAAGAACCCCGGAAGGTTCC
1._RB_47_[BRA]
___TT_________CC
2._RB_47_[BRA]
___TT_________CC
3._RB_47_[BRA]
___TT_________CC
4._RB_47_[BRA]
___TT_________CC
5._RB_47_[BRA]
___TT_________CC
6._RB_47_[BRA]
___TT_________CC
7._RB_47_[BRA]
___TT_________CC
8._RB_47_[BRA]
___TT_________CC
9._RB_47_[BRA]
___TT_________CC
10._RB_47_[BRA]
___TT_________CC
11._RB_47_[BRA]
___TT_________CC
12._RB_47_[BRA]
___TT_________CC
13._RB_47_[BRA]
___TT_________CC
14._RB_47_[BRA]
___TT_________CC
15._RB_47_[BRA]
___TT_________CC
16._RB_47_[BRA]
___TT_________CC
17._RB_47_[BRA]
___TT_________CC
18._RB_47_[BRA]
___TT_________CC
19._RB_47_[BRA]
___TT_________CC
20._RB_47_[BRA]
___TT_________CC
21._RB_47_[BRA]
___TT__________
22._RB_47_[BRA]
___TT_________CC
23._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
24._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
25._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
26._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
27._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
28._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
29._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
30._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTTCC
31._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
32._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
33._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
34._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
35._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
36._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
37._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGG_CC
38._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
39._GC-05-101-3-03
CCGTTTTTAAAGAACC_GGAAGGTTCC
40._GC-05-161-4-14
CCGTTTTTAAAGAACCCCGGAAGGTT_
41._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAAGGTTCC
42._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGG_GGTTCC
43._GC-05-101-3-03
CCGTTTTTAAAGAACCCCGGAAGGTTCC
44._RB_47_[BRA]
___TT_________CC
45._GC-08-065-1-87
CCGTTTTTAAAGAACCCCGGAA_TTCC
46._RUQ_135
_GTTT__AG______CTCC
47._RB_47_[BRA]
___TT_________CC
48._RUQ_135
___TT_________CC
49._RUQ_135
__TT_AA________CC
50._GC-05-101-3-3
GGAC_AA_AGAAGG_GGAACCAGGG
 5758596061626364656667686970
_Input profile
CCTTGGGGCCCCCCGGGGACAAGGGGAA
1._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
2._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
3._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
4._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
5._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
6._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
7._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
8._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
9._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
10._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
11._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
12._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
13._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
14._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
15._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
16._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
17._RB_47_[BRA]
CC__GG_CCCCGG_AC_GGGG_
18._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
19._RB_47_[BRA]
CC__GG_CC_GG_ACAAGGGG_
20._RB_47_[BRA]
CC__GG_CC_GG_ACAAGGGG_
21._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
22._RB_47_[BRA]
_____CCCCGG_ACAA_GG_
23._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
24._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
25._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
26._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
27._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
28._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
29._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
30._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
31._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
32._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
33._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
34._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
35._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
36._GC-08-065-1-87
CCTTGGGGCCCC_GGGGACAAGGGGAA
37._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
38._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGAC_GGGGAA
39._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
40._GC-05-161-4-14
CCTTGGGGCCCCCCGGGGACAAGGGGAA
41._GC-08-065-1-87
CCTTGGGGCCCCCCGGGGACAAGGGGAA
42._GC-08-065-1-87
CCTTGGGGCCCC_GGGGACAAGGGGAA
43._GC-05-101-3-03
CCTTGGGGCCCCCCGGGGACAAGGGGAA
44._RB_47_[BRA]
CC__GG_CCCCGG_ACAAGGGG_
45._GC-08-065-1-87
CCTTGG_CCCCACGGGGACAAGGGGAA
46._RUQ_135
_TT-GGCCCCCC_GGACAAGGGGAA
47._RB_47_[BRA]
CC____CCACGG_ACAAGGGG_
48._RUQ_135
CC__GG_CCCCGG_ACAAGGGG_
49._RUQ_135
___CCCC_CC_GGACAA___
50._GC-05-101-3-3
GGAAGGCCGGGGCCGGGGACAACCCCAA
 7172737475767778798081828384
_Input profile
CCCGAACTCCGGCCACGGACCCCCAAAC
1._RB_47_[BRA]
__AACT_____ACCC___
2._RB_47_[BRA]
__AACT_____ACCC___
3._RB_47_[BRA]
__AACT_____ACCC___
4._RB_47_[BRA]
__AACT_____ACCC___
5._RB_47_[BRA]
__AACT_____ACCC___
6._RB_47_[BRA]
__AACT_____ACCC___
7._RB_47_[BRA]
__AACT_____ACCC___
8._RB_47_[BRA]
__AACT_____ACCC___
9._RB_47_[BRA]
__AACT_____ACCC___
10._RB_47_[BRA]
__AACT_____ACCC___
11._RB_47_[BRA]
__AACT_____ACCC___
12._RB_47_[BRA]
__AACT_____ACCC___
13._RB_47_[BRA]
__AACT_____ACCC___
14._RB_47_[BRA]
__AACT_____ACCC___
15._RB_47_[BRA]
__AACT_____ACCC___
16._RB_47_[BRA]
__AACT_____ACCC___
17._RB_47_[BRA]
__AACT_____ACCC___
18._RB_47_[BRA]
__AACT_____ACCC___
19._RB_47_[BRA]
__AACT_____ACCC___
20._RB_47_[BRA]
__AACT_____ACCC___
21._RB_47_[BRA]
__AA______ACCC___
22._RB_47_[BRA]
__AACT_____ACCC___
23._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
24._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
25._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
26._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
27._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
28._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
29._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
30._GC-05-161-4-14
CCCGAACTCCGGCCACGGACCCCCAAAC
31._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
32._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
33._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
34._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
35._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
36._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
37._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
38._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
39._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
40._GC-05-161-4-14
CCCGAA_CCGGCCACGGACCCCCAAAC
41._GC-08-065-1-87
CCCGAACT_GGCCACGGACCCCCAAAC
42._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
43._GC-05-101-3-03
CCCGAACTCCGGCCACGGACCCCCAAAC
44._RB_47_[BRA]
__AACT_____ACCC___
45._GC-08-065-1-87
CCCGAACTCCGGCCACGGACCCCCAAAC
46._RUQ_135
_________ACCC__AC
47._RB_47_[BRA]
__AACT_____ACCC___
48._RUQ_135
__AACT_____ACCC___
49._RUQ_135
_CG________GG___
50._GC-05-101-3-3
___AGCCGGCCAC_AC_GGAAAC
 8586878889909192939495   
_Input profile
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
1._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
2._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
3._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
4._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
5._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
6._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
7._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
8._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
9._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
10._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
11._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
12._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
13._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
14._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
15._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
16._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
17._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
18._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
19._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
20._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
21._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
22._RB_47_[BRA]
CCCC____CTGGCC__X_XX_XX_X
23._GC-05-161-4-14
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
24._GC-05-101-3-03
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
25._GC-05-101-3-03
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
26._GC-05-101-3-03
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
27._GC-05-161-4-14
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
28._GC-05-161-4-14
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
29._GC-05-161-4-14
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
30._GC-05-161-4-14
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
31._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
32._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
33._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
34._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
35._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
36._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
37._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
38._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
39._GC-05-101-3-03
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
40._GC-05-161-4-14
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
41._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
42._GC-08-065-1-87
CCCCTTTTAACCCTGGCCTTGGX_XX_XX_X
43._GC-05-101-3-03
CCCCTT_AACCCTGGCCTTGGX_XX_XX_X
44._RB_47_[BRA]
CCCCTT_AA_CTGGCC__X_XX_XX_X
45._GC-08-065-1-87
CCCCTTTTAACCCTGGCTTTGGX_XX_XX_X
46._RUQ_135
CC___AACCCTGG___X_XX_XX_X
47._RB_47_[BRA]
CCCCTT_AA_CTGGCT__X_XX_XX_X
48._RUQ_135
CCCCCT_AA_CTGGCC__X_XX_XX_X
49._RUQ_135
_CC_________X_XX_XX_X
50._GC-05-101-3-3
GGGG_AA__AGCCGGAAGGX_XX_XX_X

Input profile: RB_47_[BRA] GC-08-065-1-87

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

1._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 11
 Dapeng Zhang, 2016

2._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 9
 Dapeng Zhang, 2016

3._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

4._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 3
 Dapeng Zhang, 2016

5._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 4
 Dapeng Zhang, 2016

6._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

7._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 3
 Dapeng Zhang, 2016

8._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 4
 Dapeng Zhang, 2016

9._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 5
 Dapeng Zhang, 2016

10._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 1 > FP
 Dapeng Zhang, 2016

11._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 3
 Dapeng Zhang, 2016

12._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 4
 Dapeng Zhang, 2016

13._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 5
 Dapeng Zhang, 2016

14._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 6
 Dapeng Zhang, 2016

15._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 7
 Dapeng Zhang, 2016

16._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 8
 Dapeng Zhang, 2016

17._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 10
 Dapeng Zhang, 2016

18._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 5
 Dapeng Zhang, 2016

19._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 1
 Dapeng Zhang, 2016

20._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 2
 Dapeng Zhang, 2016

21._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

22._RB_47_[BRA]

identical
31 shared markers

 View  View all  Clone  Any
Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

23._RB_47_[BRA] GC-05-161-4-14

99.5 %
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

24._RB_47_[BRA] GC-05-101-3-03

99.5 %
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

25._RB_47_[BRA] GC-05-101-3-03

99.5 %
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

26._RB_47_[BRA] GC-05-101-3-03

99.5 %
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

27._RB_47_[BRA] GC-05-161-4-14

99.5 %
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

28._RB_47_[BRA] GC-05-161-4-14

99.5 %
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

29._RB_47_[BRA] GC-05-161-4-14

99.5 %
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

30._RB_47_[BRA] GC-05-161-4-14

99.5 %
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

31._RB_47_[BRA] GC-08-065-1-87

99.5 %
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

32._RB_47_[BRA] GC-08-065-1-87

99.5 %
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

33._RB_47_[BRA] GC-08-065-1-87

99.5 %
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

34._RB_47_[BRA] GC-08-065-1-87

99.5 %
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

35._RB_47_[BRA] GC-08-065-1-87

99.5 %
95 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

36._RB_47_[BRA] GC-08-065-1-87

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

37._RB_47_[BRA] GC-08-065-1-87

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

38._RB_47_[BRA] GC-08-065-1-87

99.5 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

39._RB_47_[BRA] GC-05-101-3-03

99.5 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

40._RB_47_[BRA] GC-05-161-4-14

99.5 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

41._RB_47_[BRA] GC-08-065-1-87

99.5 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

42._RB_47_[BRA] GC-08-065-1-87

99.5 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

43._RB_47_[BRA] GC-05-101-3-03

98.9 %
94 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP3
 Mars, 2018

44._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 2 > FP
 Dapeng Zhang, 2016

45._RB_47_[BRA] GC-08-065-1-87

98.4 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

46._RB_47_[BRA] RUQ_135

97.6 %
41 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

47._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 12
 Dapeng Zhang, 2016

48._RB_47_[BRA] RUQ_135

95 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

49._RB_47_[BRA] RUQ_135

84.6 %
26 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

50._RB_47_[BRA] GC-05-101-3-3

50 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 3, Rep: 3, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP751 40TcSNP1484
41TcSNP602 42TcSNP561 43TcSNP894 44TcSNP1063 45TcSNP1126
46TcSNP1270 47TcSNP606 48TcSNP329 49TcSNP689 50TcSNP944
51TcSNP1242 52TcSNP1383 53TcSNP547 54TcSNP776 55TcSNP1309
56TcSNP151 57TcSNP1520 58TcSNP799 59TcSNP899 60TcSNP226
61TcSNP1439 62TcSNP1442 63TcSNP193 64TcSNP25 65TcSNP364
66TcSNP144 67TcSNP230 68TcSNP560 69TcSNP723 70TcSNP731
71TcSNP701 72TcSNP1041 73TcSNP645 74TcSNP917 75Tcm003s01336581
76Tcm003s07402719 77Tcm001s00947643 78Tcm006s26664133 79Tcm002s20575712 80TcSNP529
81TcSNP1458 82TcSNP60 83TcSNP430 84TcSNP823 85TcSNP619
86TcSNP994 87TcSNP1144 88TcSNP1156 89TcSNP469 90TcSNP999
91TcSNP242 92TcSNP1253 93TcSNP1414 94TcSNP154 95TcSNP240