SNP Profiles of RB 47   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AAAACCCCGGAATTCCCTTTGGTTTTTT
1._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
2._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
3._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
4._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
5._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
6._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
7._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
8._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
9._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
10._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
11._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
12._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
13._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
14._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
15._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
16._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
17._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTT__TTTTTT
18._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
19._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
20._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
21._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
22._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
23._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
24._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
25._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
26._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
27._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
28._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
29._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
30._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
31._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
32._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
33._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
34._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
35._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
36._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
37._RB_47_[BRA]___
AAAACCCC________CTTT____TT__
38._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
39._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
40._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
41._RB_47_[BRA]___
AAAACCCC__________TTGG__TT__
42._RB_47_[BRA]___
AAAACCCCGGAACTCCCTTTGGTTTTTT
43._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
44._RB_47_[BRA]___
AAAACCCCGGAATTCCCTTTGGTTTTTT
45._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
46._RB_47_[BRA]___
AAAACCCC________CTTTGG__TT__
47._RB_47_[BRA]___
____CCCC____CC________TTTT__
48._RB_47_[BRA]___
AAAACCCC________CTCTAG__TT__
49._RB_47_[BRA]___
______CC________CT______TT__
50._RB_47_[BRA]___
AAAA__CCGGAA__GGAG__GGAAAAAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTCCAAGGGGCCCGCCAATTGGAAAAGG
1._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
2._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
3._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
4._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
5._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
6._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
7._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
8._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
9._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
10._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
11._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
12._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
13._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
14._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
15._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
16._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
17._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
18._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
19._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
20._RB_47_[BRA]___
______GG____CG________AAAA__
21._RB_47_[BRA]___
______GG____CG________AAAA__
22._RB_47_[BRA]___
______GG____CG________AAAA__
23._RB_47_[BRA]___
______GG____CG________AAAA__
24._RB_47_[BRA]___
______GG____CG________AAAA__
25._RB_47_[BRA]___
______GG____CG________AAAA__
26._RB_47_[BRA]___
______GG____CG________AAAA__
27._RB_47_[BRA]___
______GG____CG________AAAA__
28._RB_47_[BRA]___
______GG____CG________AAAA__
29._RB_47_[BRA]___
______GG____CG________AAAA__
30._RB_47_[BRA]___
______GG____CG________AAAA__
31._RB_47_[BRA]___
______GG____CG________AAAA__
32._RB_47_[BRA]___
______GG____CG________AAAA__
33._RB_47_[BRA]___
______GG____CG________AAAA__
34._RB_47_[BRA]___
______GG____CG________AAAA__
35._RB_47_[BRA]___
______GG____CG________AAAA__
36._RB_47_[BRA]___
______GG____CG________AAAA__
37._RB_47_[BRA]___
______GG____CG________AAAA__
38._RB_47_[BRA]___
______GG____CG________AAAA__
39._RB_47_[BRA]___
______GG____CG________AAAA__
40._RB_47_[BRA]___
______GG____CG________AAAA__
41._RB_47_[BRA]___
______GG____CG________AAAA__
42._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
43._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
44._RB_47_[BRA]___
TTCCAAGGGGCCCGCCAATTGGAAAAGG
45._RB_47_[BRA]___
______GG____CG________AAAA__
46._RB_47_[BRA]___
______GG____CG________AAAA__
47._RB_47_[BRA]___
__________CC________GG__AAGG
48._RB_47_[BRA]___
______GG____CG________AAAA__
49._RB_47_[BRA]___
____AA____GG__CC____GG__AAGG
50._RB_47_[BRA]___
AACCAAGGCC__CGGGAAAAGGAAAACC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGAATTGGGGGGCCAAGGGGAACCGGCC
1._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
2._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
3._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
4._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
5._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
6._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
7._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
8._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
9._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
10._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
11._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
12._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
13._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
14._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
15._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
16._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
17._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
18._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
19._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
20._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
21._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
22._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
23._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
24._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
25._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
26._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
27._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
28._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
29._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
30._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
31._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
32._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
33._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
34._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
35._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
36._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
37._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
38._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
39._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
40._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
41._RB_47_[BRA]___
GG________GG____GG__________
42._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
43._RB_47_[BRA]___
GGATTTGGGGGGCCAAGGGGAACCGGCC
44._RB_47_[BRA]___
GGAATTGGGGGGCCAAGGGGAACCGGCC
45._RB_47_[BRA]___
GGAT______GG__AAGG__AA______
46._RB_47_[BRA]___
GGAA______GG__AAGG__AA______
47._RB_47_[BRA]___
GG______GGGGCCAAGG__AACC____
48._RB_47_[BRA]___
GGAA______GG__AAGG__AG______
49._RB_47_[BRA]___
CC______GGGG__________CC____
50._RB_47_[BRA]___
CCAAAACCGGGGCCAACCCCAAGGGGGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
GTTTTTAAAGAACCCCGGAAGGTTCCCC
1._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTTCCCC
2._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTTCCCC
3._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTTCCCC
4._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTTCCCC
5._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTTCCCC
6._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTTCCCC
7._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTTCCCC
8._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTTCCCC
9._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTTCCCC
10._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTTCCCC
11._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTTCCCC
12._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTTCCCC
13._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTTCCCC
14._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTTCCCC
15._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGG__CCCC
16._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTTCCCC
17._RB_47_[BRA]___
GTTTTTAAAGAACC__GGAAGGTTCCCC
18._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTT__CC
19._RB_47_[BRA]___
GTTTTTAAAGAACCCCGG__GGTTCCCC
20._RB_47_[BRA]___
____TT__________________CCCC
21._RB_47_[BRA]___
____TT__________________CCCC
22._RB_47_[BRA]___
____TT__________________CCCC
23._RB_47_[BRA]___
____TT__________________CCCC
24._RB_47_[BRA]___
____TT__________________CCCC
25._RB_47_[BRA]___
____TT__________________CCCC
26._RB_47_[BRA]___
____TT__________________CCCC
27._RB_47_[BRA]___
____TT__________________CCCC
28._RB_47_[BRA]___
____TT__________________CCCC
29._RB_47_[BRA]___
____TT__________________CCCC
30._RB_47_[BRA]___
____TT__________________CCCC
31._RB_47_[BRA]___
____TT__________________CCCC
32._RB_47_[BRA]___
____TT__________________CCCC
33._RB_47_[BRA]___
____TT__________________CCCC
34._RB_47_[BRA]___
____TT__________________CCCC
35._RB_47_[BRA]___
____TT__________________CCCC
36._RB_47_[BRA]___
____TT__________________CCCC
37._RB_47_[BRA]___
____TT__________________CCCC
38._RB_47_[BRA]___
____TT__________________CCCC
39._RB_47_[BRA]___
____TT__________________CCCC
40._RB_47_[BRA]___
____TT____________________CC
41._RB_47_[BRA]___
____TT__________________CC__
42._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTTCCCC
43._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAAGGTTCCCC
44._RB_47_[BRA]___
GTTTTTAAAGAACCCCGGAA__TTCCCC
45._RB_47_[BRA]___
____TT__________________CCCC
46._RB_47_[BRA]___
____TT__________________CCCC
47._RB_47_[BRA]___
GTTT____AG____________CTCC__
48._RB_47_[BRA]___
____TT__________________CCCC
49._RB_47_[BRA]___
__TT__AA________________CC__
50._RB_47_[BRA]___
AC__AA__AGAAGG__GGAACCAGGGGG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
TTGGGGCCCCCCGGGGACAAGGGGAACC
1._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
2._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
3._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
4._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
5._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
6._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
7._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
8._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
9._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
10._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
11._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
12._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
13._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
14._RB_47_[BRA]___
TTGGGGCCCC__GGGGACAAGGGGAACC
15._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
16._RB_47_[BRA]___
TTGGGGCCCCCCGGGGAC__GGGGAACC
17._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
18._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
19._RB_47_[BRA]___
TTGGGGCCCC__GGGGACAAGGGGAACC
20._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
21._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
22._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
23._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
24._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
25._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
26._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
27._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
28._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
29._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
30._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
31._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
32._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
33._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
34._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
35._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
36._RB_47_[BRA]___
____GG__CCCCGG__AC__GGGG____
37._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
38._RB_47_[BRA]___
____GG__CC__GG__ACAAGGGG____
39._RB_47_[BRA]___
____GG__CC__GG__ACAAGGGG____
40._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
41._RB_47_[BRA]___
________CCCCGG__ACAA__GG____
42._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
43._RB_47_[BRA]___
TTGGGGCCCCCCGGGGACAAGGGGAACC
44._RB_47_[BRA]___
TTGG__CCCCACGGGGACAAGGGGAACC
45._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
46._RB_47_[BRA]___
________CCACGG__ACAAGGGG____
47._RB_47_[BRA]___
TT__GGCCCCCC__GGACAAGGGGAA__
48._RB_47_[BRA]___
____GG__CCCCGG__ACAAGGGG____
49._RB_47_[BRA]___
____CCCC__CC__GGACAA________
50._RB_47_[BRA]___
AAGGCCGGGGCCGGGGACAACCCCAA__
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CGAACTGGCCACGGACCCCCAAACCCCC
1._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
2._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
3._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
4._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
5._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
6._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
7._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
8._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
9._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
10._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
11._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
12._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
13._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
14._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
15._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
16._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
17._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
18._RB_47_[BRA]___
CGAA__GGCCACGGACCCCCAAACCCCC
19._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
20._RB_47_[BRA]___
__AACT________ACCC______CCCC
21._RB_47_[BRA]___
__AACT________ACCC______CCCC
22._RB_47_[BRA]___
__AACT________ACCC______CCCC
23._RB_47_[BRA]___
__AACT________ACCC______CCCC
24._RB_47_[BRA]___
__AACT________ACCC______CCCC
25._RB_47_[BRA]___
__AACT________ACCC______CCCC
26._RB_47_[BRA]___
__AACT________ACCC______CCCC
27._RB_47_[BRA]___
__AACT________ACCC______CCCC
28._RB_47_[BRA]___
__AACT________ACCC______CCCC
29._RB_47_[BRA]___
__AACT________ACCC______CCCC
30._RB_47_[BRA]___
__AACT________ACCC______CCCC
31._RB_47_[BRA]___
__AACT________ACCC______CCCC
32._RB_47_[BRA]___
__AACT________ACCC______CCCC
33._RB_47_[BRA]___
__AACT________ACCC______CCCC
34._RB_47_[BRA]___
__AACT________ACCC______CCCC
35._RB_47_[BRA]___
__AACT________ACCC______CCCC
36._RB_47_[BRA]___
__AACT________ACCC______CCCC
37._RB_47_[BRA]___
__AACT________ACCC______CCCC
38._RB_47_[BRA]___
__AACT________ACCC______CCCC
39._RB_47_[BRA]___
__AACT________ACCC______CCCC
40._RB_47_[BRA]___
__AA__________ACCC______CCCC
41._RB_47_[BRA]___
__AACT________ACCC______CCCC
42._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
43._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
44._RB_47_[BRA]___
CGAACTGGCCACGGACCCCCAAACCCCC
45._RB_47_[BRA]___
__AACT________ACCC______CCCC
46._RB_47_[BRA]___
__AACT________ACCC______CCCC
47._RB_47_[BRA]___
______________ACCC____ACCC__
48._RB_47_[BRA]___
__AACT________ACCC______CCCC
49._RB_47_[BRA]___
CG______________GG________CC
50._RB_47_[BRA]___
____AGGGCCAC__AC__GGAAACGGGG
 85 86 87 88 89 90 91 92 93      
_Input profile
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
1._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
2._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
3._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
4._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
5._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
6._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
7._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
8._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
9._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
10._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
11._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
12._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
13._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
14._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
15._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
16._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
17._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
18._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
19._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
20._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
21._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
22._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
23._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
24._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
25._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
26._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
27._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
28._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
29._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
30._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
31._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
32._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
33._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
34._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
35._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
36._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
37._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
38._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
39._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
40._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
41._RB_47_[BRA]___
________CTGGCC____X_XX_XX_XX_XX_X
42._RB_47_[BRA]___
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
43._RB_47_[BRA]___
TT__AACCCTGGCCTTGGX_XX_XX_XX_XX_X
44._RB_47_[BRA]___
TTTTAACCCTGGCTTTGGX_XX_XX_XX_XX_X
45._RB_47_[BRA]___
TT__AA__CTGGCC____X_XX_XX_XX_XX_X
46._RB_47_[BRA]___
TT__AA__CTGGCT____X_XX_XX_XX_XX_X
47._RB_47_[BRA]___
____AACCCTGG______X_XX_XX_XX_XX_X
48._RB_47_[BRA]___
CT__AA__CTGGCC____X_XX_XX_XX_XX_X
49._RB_47_[BRA]___
__________________X_XX_XX_XX_XX_X
50._RB_47_[BRA]___
__AA____AGCCGGAAGGX_XX_XX_XX_XX_X

Input profile: RB_47_[BRA] GC-08-065-1-87

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

1._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

2._RB_47_[BRA] GC-05-101-3-03

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

3._RB_47_[BRA] GC-05-101-3-03

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

4._RB_47_[BRA] GC-05-101-3-03

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

5._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

6._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

7._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

8._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

9._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

10._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

11._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

12._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

13._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

14._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

15._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

16._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

17._RB_47_[BRA] GC-05-101-3-03

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

18._RB_47_[BRA] GC-05-161-4-14

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

19._RB_47_[BRA] GC-08-065-1-87

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

20._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 11
 Dapeng Zhang, 2016

21._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 9
 Dapeng Zhang, 2016

22._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 1
 Dapeng Zhang, 2016

23._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 3
 Dapeng Zhang, 2016

24._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 4
 Dapeng Zhang, 2016

25._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

26._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 3
 Dapeng Zhang, 2016

27._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 4
 Dapeng Zhang, 2016

28._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 5
 Dapeng Zhang, 2016

29._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 1 > FP
 Dapeng Zhang, 2016

30._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 3
 Dapeng Zhang, 2016

31._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 4
 Dapeng Zhang, 2016

32._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 5
 Dapeng Zhang, 2016

33._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 6
 Dapeng Zhang, 2016

34._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 7
 Dapeng Zhang, 2016

35._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 8
 Dapeng Zhang, 2016

36._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 10
 Dapeng Zhang, 2016

37._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 5
 Dapeng Zhang, 2016

38._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 1
 Dapeng Zhang, 2016

39._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 2
 Dapeng Zhang, 2016

40._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

41._RB_47_[BRA]

identical
31 shared markers

 View  View all  Clone  Any
Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

42._RB_47_[BRA] GC-08-065-1-87

99.5 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

43._RB_47_[BRA] GC-05-101-3-03

99.5 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP3
 Mars, 2018

44._RB_47_[BRA] GC-08-065-1-87

98.9 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

45._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 2 > FP
 Dapeng Zhang, 2016

46._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 12
 Dapeng Zhang, 2016

47._RB_47_[BRA] RUQ_135

96.3 %
41 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

48._RB_47_[BRA] RUQ_135

95 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

49._RB_47_[BRA] RUQ_135

84 %
25 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

50._RB_47_[BRA] GC-05-101-3-3

50 %
78 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 3, Rep: 3, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240