SNP Profiles of RB 47 [BRA]   View Data

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 Key

 1234567891011121314
_Input profile
AAAACCCCGGAATTCCCTTTGGTTTTTT
1._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
2._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
3._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
4._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
5._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
6._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
7._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
8._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
9._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
10._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
11._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
12._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
13._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
14._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
15._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
16._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
17._GC-05-101-3-03
AAAACCCCGGAATTCCCTTT_TTTTTT
18._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
19._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
20._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
21._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
22._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
23._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
24._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
25._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
26._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
27._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
28._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
29._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
30._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
31._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
32._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
33._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
34._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
35._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
36._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
37._RB_47_[BRA]
AAAACCCC____CTTT__TT_
38._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
39._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
40._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
41._RB_47_[BRA]
AAAACCCC_____TTGG_TT_
42._GC-08-065-1-87
AAAACCCCGGAACTCCCTTTGGTTTTTT
43._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
44._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
45._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
46._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
47._RUQ_135
__CCCC__CC_-__TTTT_
48._RUQ_135
AAAACCCC____CTCTAG_TT_
49._RUQ_135
___CC____CT___TT_
50._GC-05-101-3-3
AAAA_CCGGAA_GGAG_GGAAAAAA
 1516171819202122232425262728
_Input profile
TTCCAAGGGGCCCGCCAATTGGAAAAGG
1._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
2._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
3._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
4._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
5._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
6._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
7._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
8._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
9._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
10._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
11._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
12._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
13._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
14._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
15._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
16._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
17._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
18._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
19._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
20._RB_47_[BRA]
___GG__CG____AAAA_
21._RB_47_[BRA]
___GG__CG____AAAA_
22._RB_47_[BRA]
___GG__CG____AAAA_
23._RB_47_[BRA]
___GG__CG____AAAA_
24._RB_47_[BRA]
___GG__CG____AAAA_
25._RB_47_[BRA]
___GG__CG____AAAA_
26._RB_47_[BRA]
___GG__CG____AAAA_
27._RB_47_[BRA]
___GG__CG____AAAA_
28._RB_47_[BRA]
___GG__CG____AAAA_
29._RB_47_[BRA]
___GG__CG____AAAA_
30._RB_47_[BRA]
___GG__CG____AAAA_
31._RB_47_[BRA]
___GG__CG____AAAA_
32._RB_47_[BRA]
___GG__CG____AAAA_
33._RB_47_[BRA]
___GG__CG____AAAA_
34._RB_47_[BRA]
___GG__CG____AAAA_
35._RB_47_[BRA]
___GG__CG____AAAA_
36._RB_47_[BRA]
___GG__CG____AAAA_
37._RB_47_[BRA]
___GG__CG____AAAA_
38._RB_47_[BRA]
___GG__CG____AAAA_
39._RB_47_[BRA]
___GG__CG____AAAA_
40._RB_47_[BRA]
___GG__CG____AAAA_
41._RB_47_[BRA]
___GG__CG____AAAA_
42._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
43._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
44._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
45._RB_47_[BRA]
___GG__CG____AAAA_
46._RB_47_[BRA]
___GG__CG____AAAA_
47._RUQ_135
_____CC____GG_AAGG
48._RUQ_135
___GG__CG____AAAA_
49._RUQ_135
__AA__GG_CC__GG_AAGG
50._GC-05-101-3-3
AACCAAGGCC_CGGGAAAAGGAAAACC
 2930313233343536373839404142
_Input profile
GGAATTGGGGGGCCAAGGGGAACCGGCC
1._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
2._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGAACCGGCC
3._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGAACCGGCC
4._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGAACCGGCC
5._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
6._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
7._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
8._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
9._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
10._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
11._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
12._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
13._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
14._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
15._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
16._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
17._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGAACCGGCC
18._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
19._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
20._RB_47_[BRA]
GGAA___GG_AAGG_AA___
21._RB_47_[BRA]
GGAA___GG_AAGG_AA___
22._RB_47_[BRA]
GGAA___GG_AAGG_AA___
23._RB_47_[BRA]
GGAA___GG_AAGG_AA___
24._RB_47_[BRA]
GGAA___GG_AAGG_AA___
25._RB_47_[BRA]
GGAA___GG_AAGG_AA___
26._RB_47_[BRA]
GGAA___GG_AAGG_AA___
27._RB_47_[BRA]
GGAA___GG_AAGG_AA___
28._RB_47_[BRA]
GGAA___GG_AAGG_AA___
29._RB_47_[BRA]
GGAA___GG_AAGG_AA___
30._RB_47_[BRA]
GGAA___GG_AAGG_AA___
31._RB_47_[BRA]
GGAA___GG_AAGG_AA___
32._RB_47_[BRA]
GGAA___GG_AAGG_AA___
33._RB_47_[BRA]
GGAA___GG_AAGG_AA___
34._RB_47_[BRA]
GGAA___GG_AAGG_AA___
35._RB_47_[BRA]
GGAA___GG_AAGG_AA___
36._RB_47_[BRA]
GGAA___GG_AAGG_AA___
37._RB_47_[BRA]
GGAA___GG_AAGG_AA___
38._RB_47_[BRA]
GGAA___GG_AAGG_AA___
39._RB_47_[BRA]
GGAA___GG_AAGG_AA___
40._RB_47_[BRA]
GGAA___GG_AAGG_AA___
41._RB_47_[BRA]
GG____GG__GG_____
42._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
43._GC-05-101-3-03
GGATTTGGGGGGCCAAGGGGAACCGGCC
44._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
45._RB_47_[BRA]
GGAT___GG_AAGG_AA___
46._RB_47_[BRA]
GGAA___GG_AAGG_AA___
47._RUQ_135
GG___GGGGCCAAGG_AACC__
48._RUQ_135
GGAA___GG_AAGG_AG___
49._RUQ_135
CC___GGGG_____CC__
50._GC-05-101-3-3
CCAAAACCGGGGCCAACCCCAAGGGGGG
 4344454647484950515253545556
_Input profile
GTTTTTAAAGAACCCCGGAAGGTTCCCC
1._GC-05-161-4-14
GTTTTTAAAGAACCCCGGAAGGTTCCCC
2._GC-05-101-3-03
GTTTTTAAAGAACCCCGGAAGGTTCCCC
3._GC-05-101-3-03
GTTTTTAAAGAACCCCGGAAGGTTCCCC
4._GC-05-101-3-03
GTTTTTAAAGAACCCCGGAAGGTTCCCC
5._GC-05-161-4-14
GTTTTTAAAGAACCCCGGAAGGTTCCCC
6._GC-05-161-4-14
GTTTTTAAAGAACCCCGGAAGGTTCCCC
7._GC-05-161-4-14
GTTTTTAAAGAACCCCGGAAGGTTCCCC
8._GC-05-161-4-14
GTTTTTAAAGAACCCCGGAAGGTTCCCC
9._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAAGGTTCCCC
10._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAAGGTTCCCC
11._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAAGGTTCCCC
12._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAAGGTTCCCC
13._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAAGGTTCCCC
14._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAAGGTTCCCC
15._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAAGG_CCCC
16._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAAGGTTCCCC
17._GC-05-101-3-03
GTTTTTAAAGAACC_GGAAGGTTCCCC
18._GC-05-161-4-14
GTTTTTAAAGAACCCCGGAAGGTT_CC
19._GC-08-065-1-87
GTTTTTAAAGAACCCCGG_GGTTCCCC
20._RB_47_[BRA]
__TT_________CCCC
21._RB_47_[BRA]
__TT_________CCCC
22._RB_47_[BRA]
__TT_________CCCC
23._RB_47_[BRA]
__TT_________CCCC
24._RB_47_[BRA]
__TT_________CCCC
25._RB_47_[BRA]
__TT_________CCCC
26._RB_47_[BRA]
__TT_________CCCC
27._RB_47_[BRA]
__TT_________CCCC
28._RB_47_[BRA]
__TT_________CCCC
29._RB_47_[BRA]
__TT_________CCCC
30._RB_47_[BRA]
__TT_________CCCC
31._RB_47_[BRA]
__TT_________CCCC
32._RB_47_[BRA]
__TT_________CCCC
33._RB_47_[BRA]
__TT_________CCCC
34._RB_47_[BRA]
__TT_________CCCC
35._RB_47_[BRA]
__TT_________CCCC
36._RB_47_[BRA]
__TT_________CCCC
37._RB_47_[BRA]
__TT_________CCCC
38._RB_47_[BRA]
__TT_________CCCC
39._RB_47_[BRA]
__TT_________CCCC
40._RB_47_[BRA]
__TT__________CC
41._RB_47_[BRA]
__TT_________CC_
42._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAAGGTTCCCC
43._GC-05-101-3-03
GTTTTTAAAGAACCCCGGAAGGTTCCCC
44._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAA_TTCCCC
45._RB_47_[BRA]
__TT_________CCCC
46._RB_47_[BRA]
__TT_________CCCC
47._RUQ_135
GTTT__AG______CTCC_
48._RUQ_135
__TT_________CCCC
49._RUQ_135
_TT_AA________CC_
50._GC-05-101-3-3
AC_AA_AGAAGG_GGAACCAGGGGG
 5758596061626364656667686970
_Input profile
TTGGGGCCCCCCGGGGACAAGGGGAACC
1._GC-05-161-4-14
TTGGGGCCCCCCGGGGACAAGGGGAACC
2._GC-05-101-3-03
TTGGGGCCCCCCGGGGACAAGGGGAACC
3._GC-05-101-3-03
TTGGGGCCCCCCGGGGACAAGGGGAACC
4._GC-05-101-3-03
TTGGGGCCCCCCGGGGACAAGGGGAACC
5._GC-05-161-4-14
TTGGGGCCCCCCGGGGACAAGGGGAACC
6._GC-05-161-4-14
TTGGGGCCCCCCGGGGACAAGGGGAACC
7._GC-05-161-4-14
TTGGGGCCCCCCGGGGACAAGGGGAACC
8._GC-05-161-4-14
TTGGGGCCCCCCGGGGACAAGGGGAACC
9._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
10._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
11._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
12._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
13._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
14._GC-08-065-1-87
TTGGGGCCCC_GGGGACAAGGGGAACC
15._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
16._GC-08-065-1-87
TTGGGGCCCCCCGGGGAC_GGGGAACC
17._GC-05-101-3-03
TTGGGGCCCCCCGGGGACAAGGGGAACC
18._GC-05-161-4-14
TTGGGGCCCCCCGGGGACAAGGGGAACC
19._GC-08-065-1-87
TTGGGGCCCC_GGGGACAAGGGGAACC
20._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
21._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
22._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
23._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
24._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
25._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
26._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
27._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
28._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
29._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
30._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
31._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
32._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
33._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
34._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
35._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
36._RB_47_[BRA]
__GG_CCCCGG_AC_GGGG__
37._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
38._RB_47_[BRA]
__GG_CC_GG_ACAAGGGG__
39._RB_47_[BRA]
__GG_CC_GG_ACAAGGGG__
40._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
41._RB_47_[BRA]
____CCCCGG_ACAA_GG__
42._GC-08-065-1-87
TTGGGGCCCCCCGGGGACAAGGGGAACC
43._GC-05-101-3-03
TTGGGGCCCCCCGGGGACAAGGGGAACC
44._GC-08-065-1-87
TTGG_CCCCACGGGGACAAGGGGAACC
45._RB_47_[BRA]
__GG_CCCCGG_ACAAGGGG__
46._RB_47_[BRA]
____CCACGG_ACAAGGGG__
47._RUQ_135
TT-GGCCCCCC_GGACAAGGGGAA_
48._RUQ_135
__GG_CCCCGG_ACAAGGGG__
49._RUQ_135
__CCCC_CC_GGACAA____
50._GC-05-101-3-3
AAGGCCGGGGCCGGGGACAACCCCAA_
 7172737475767778798081828384
_Input profile
CGAACTGGCCACGGACCCCCAAACCCCC
1._GC-05-161-4-14
CGAACTGGCCACGGACCCCCAAACCCCC
2._GC-05-101-3-03
CGAACTGGCCACGGACCCCCAAACCCCC
3._GC-05-101-3-03
CGAACTGGCCACGGACCCCCAAACCCCC
4._GC-05-101-3-03
CGAACTGGCCACGGACCCCCAAACCCCC
5._GC-05-161-4-14
CGAACTGGCCACGGACCCCCAAACCCCC
6._GC-05-161-4-14
CGAACTGGCCACGGACCCCCAAACCCCC
7._GC-05-161-4-14
CGAACTGGCCACGGACCCCCAAACCCCC
8._GC-05-161-4-14
CGAACTGGCCACGGACCCCCAAACCCCC
9._GC-08-065-1-87
CGAACTGGCCACGGACCCCCAAACCCCC
10._GC-08-065-1-87
CGAACTGGCCACGGACCCCCAAACCCCC
11._GC-08-065-1-87
CGAACTGGCCACGGACCCCCAAACCCCC
12._GC-08-065-1-87
CGAACTGGCCACGGACCCCCAAACCCCC
13._GC-08-065-1-87
CGAACTGGCCACGGACCCCCAAACCCCC
14._GC-08-065-1-87
CGAACTGGCCACGGACCCCCAAACCCCC
15._GC-08-065-1-87
CGAACTGGCCACGGACCCCCAAACCCCC
16._GC-08-065-1-87
CGAACTGGCCACGGACCCCCAAACCCCC
17._GC-05-101-3-03
CGAACTGGCCACGGACCCCCAAACCCCC
18._GC-05-161-4-14
CGAA_GGCCACGGACCCCCAAACCCCC
19._GC-08-065-1-87
CGAACTGGCCACGGACCCCCAAACCCCC
20._RB_47_[BRA]
_AACT____ACCC___CCCC
21._RB_47_[BRA]
_AACT____ACCC___CCCC
22._RB_47_[BRA]
_AACT____ACCC___CCCC
23._RB_47_[BRA]
_AACT____ACCC___CCCC
24._RB_47_[BRA]
_AACT____ACCC___CCCC
25._RB_47_[BRA]
_AACT____ACCC___CCCC
26._RB_47_[BRA]
_AACT____ACCC___CCCC
27._RB_47_[BRA]
_AACT____ACCC___CCCC
28._RB_47_[BRA]
_AACT____ACCC___CCCC
29._RB_47_[BRA]
_AACT____ACCC___CCCC
30._RB_47_[BRA]
_AACT____ACCC___CCCC
31._RB_47_[BRA]
_AACT____ACCC___CCCC
32._RB_47_[BRA]
_AACT____ACCC___CCCC
33._RB_47_[BRA]
_AACT____ACCC___CCCC
34._RB_47_[BRA]
_AACT____ACCC___CCCC
35._RB_47_[BRA]
_AACT____ACCC___CCCC
36._RB_47_[BRA]
_AACT____ACCC___CCCC
37._RB_47_[BRA]
_AACT____ACCC___CCCC
38._RB_47_[BRA]
_AACT____ACCC___CCCC
39._RB_47_[BRA]
_AACT____ACCC___CCCC
40._RB_47_[BRA]
_AA_____ACCC___CCCC
41._RB_47_[BRA]
_AACT____ACCC___CCCC
42._GC-08-065-1-87
CGAACTGGCCACGGACCCCCAAACCCCC
43._GC-05-101-3-03
CGAACTGGCCACGGACCCCCAAACCCCC
44._GC-08-065-1-87
CGAACTGGCCACGGACCCCCAAACCCCC
45._RB_47_[BRA]
_AACT____ACCC___CCCC
46._RB_47_[BRA]
_AACT____ACCC___CCCC
47._RUQ_135
_______ACCC__ACCC_
48._RUQ_135
_AACT____ACCC___CCCC
49._RUQ_135
CG_______GG____CC
50._GC-05-101-3-3
__AGGGCCAC_AC_GGAAACGGGG
 858687888990919293     
_Input profile
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
1._GC-05-161-4-14
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
2._GC-05-101-3-03
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
3._GC-05-101-3-03
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
4._GC-05-101-3-03
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
5._GC-05-161-4-14
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
6._GC-05-161-4-14
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
7._GC-05-161-4-14
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
8._GC-05-161-4-14
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
9._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
10._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
11._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
12._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
13._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
14._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
15._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
16._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
17._GC-05-101-3-03
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
18._GC-05-161-4-14
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
19._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
20._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
21._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
22._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
23._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
24._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
25._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
26._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
27._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
28._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
29._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
30._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
31._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
32._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
33._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
34._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
35._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
36._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
37._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
38._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
39._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
40._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
41._RB_47_[BRA]
____CTGGCC__X_XX_XX_XX_XX_X
42._GC-08-065-1-87
TTTTAACCCTGGCCTTGGX_XX_XX_XX_XX_X
43._GC-05-101-3-03
TT_AACCCTGGCCTTGGX_XX_XX_XX_XX_X
44._GC-08-065-1-87
TTTTAACCCTGGCTTTGGX_XX_XX_XX_XX_X
45._RB_47_[BRA]
TT_AA_CTGGCC__X_XX_XX_XX_XX_X
46._RB_47_[BRA]
TT_AA_CTGGCT__X_XX_XX_XX_XX_X
47._RUQ_135
__AACCCTGG___X_XX_XX_XX_XX_X
48._RUQ_135
CT_AA_CTGGCC__X_XX_XX_XX_XX_X
49._RUQ_135
_________X_XX_XX_XX_XX_X
50._GC-05-101-3-3
_AA__AGCCGGAAGGX_XX_XX_XX_XX_X

Input profile: RB_47_[BRA] GC-08-065-1-87

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

1._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

2._RB_47_[BRA] GC-05-101-3-03

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

3._RB_47_[BRA] GC-05-101-3-03

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

4._RB_47_[BRA] GC-05-101-3-03

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

5._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

6._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

7._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

8._RB_47_[BRA] GC-05-161-4-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

9._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

10._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

11._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

12._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

13._RB_47_[BRA] GC-08-065-1-87

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

14._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

15._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

16._RB_47_[BRA] GC-08-065-1-87

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

17._RB_47_[BRA] GC-05-101-3-03

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

18._RB_47_[BRA] GC-05-161-4-14

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

19._RB_47_[BRA] GC-08-065-1-87

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

20._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 11
 Dapeng Zhang, 2016

21._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 9
 Dapeng Zhang, 2016

22._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

23._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 3
 Dapeng Zhang, 2016

24._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 4
 Dapeng Zhang, 2016

25._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

26._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 3
 Dapeng Zhang, 2016

27._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 4
 Dapeng Zhang, 2016

28._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 5
 Dapeng Zhang, 2016

29._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 1 > FP
 Dapeng Zhang, 2016

30._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 3
 Dapeng Zhang, 2016

31._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 4
 Dapeng Zhang, 2016

32._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 5
 Dapeng Zhang, 2016

33._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 6
 Dapeng Zhang, 2016

34._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 7
 Dapeng Zhang, 2016

35._RB_47_[BRA]

identical
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 8
 Dapeng Zhang, 2016

36._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 10
 Dapeng Zhang, 2016

37._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 5
 Dapeng Zhang, 2016

38._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 1
 Dapeng Zhang, 2016

39._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 2
 Dapeng Zhang, 2016

40._RB_47_[BRA]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

41._RB_47_[BRA]

identical
31 shared markers

 View  View all  Clone  Any
Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

42._RB_47_[BRA] GC-08-065-1-87

99.5 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

43._RB_47_[BRA] GC-05-101-3-03

99.5 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP3
 Mars, 2018

44._RB_47_[BRA] GC-08-065-1-87

98.9 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

45._RB_47_[BRA]

98.8 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 2 > FP
 Dapeng Zhang, 2016

46._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 12
 Dapeng Zhang, 2016

47._RB_47_[BRA] RUQ_135

96.3 %
41 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

48._RB_47_[BRA] RUQ_135

95 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

49._RB_47_[BRA] RUQ_135

84 %
25 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

50._RB_47_[BRA] GC-05-101-3-3

50 %
78 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 3, Rep: 3, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240