SNP Profiles of RB 47 [BRA]   View Data

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
AAAACCCCGGAATTCCCTTTGGTTTTTT
1._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
2._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
3._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
4._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
5._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
6._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
7._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
8._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
9._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
10._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
11._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
12._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
13._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
14._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
15._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
16._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
17._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
18._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
19._GC-08-065-1-87
AAAACCCCGGAATTCCCTTTGGTTTTTT
20._GC-05-101-3-03
AAAACCCCGGAATTCCCTTT_TTTTTT
21._GC-05-161-4-14
AAAACCCCGGAATTCCCTTTGGTTTTTT
22._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
23._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
24._GC-08-065-1-87
AAAACCCCGGAACTCCCTTTGGTTTTTT
25._GC-05-101-3-03
AAAACCCCGGAATTCCCTTTGGTTTTTT
26._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
27._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
28._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
29._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
30._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
31._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
32._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
33._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
34._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
35._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
36._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
37._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
38._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
39._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
40._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
41._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
42._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
43._RB_47_[BRA]
AAAACCCC____CTTT__TT_
44._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
45._RB_47_[BRA]
AAAACCCC_____TTGG_TT_
46._RB_47_[BRA]
AAAACCCC____CTTTGG_TT_
47._RUQ_135
__CCCC__CC_-__TTTT_
48._RUQ_135
AAAACCCC____CTCTAG_TT_
49._RUQ_135
___CC____CT___TT_
50._GC-05-101-3-3
AAAA_CCGGAA_GGAG_GGAAAAAA
 1516171819202122232425262728
_Input profile
TTCCAAGGGGCCCGCCAATTGGAAAAGG
1._RB_47_[BRA]
___GG__CG____AAAA_
2._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
3._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
4._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
5._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
6._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
7._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
8._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
9._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
10._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
11._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
12._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
13._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
14._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
15._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
16._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
17._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
18._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
19._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
20._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
21._GC-05-161-4-14
TTCCAAGGGGCCCGCCAATTGGAAAAGG
22._RB_47_[BRA]
___GG__CG____AAAA_
23._RB_47_[BRA]
___GG__CG____AAAA_
24._GC-08-065-1-87
TTCCAAGGGGCCCGCCAATTGGAAAAGG
25._GC-05-101-3-03
TTCCAAGGGGCCCGCCAATTGGAAAAGG
26._RB_47_[BRA]
___GG__CG____AAAA_
27._RB_47_[BRA]
___GG__CG____AAAA_
28._RB_47_[BRA]
___GG__CG____AAAA_
29._RB_47_[BRA]
___GG__CG____AAAA_
30._RB_47_[BRA]
___GG__CG____AAAA_
31._RB_47_[BRA]
___GG__CG____AAAA_
32._RB_47_[BRA]
___GG__CG____AAAA_
33._RB_47_[BRA]
___GG__CG____AAAA_
34._RB_47_[BRA]
___GG__CG____AAAA_
35._RB_47_[BRA]
___GG__CG____AAAA_
36._RB_47_[BRA]
___GG__CG____AAAA_
37._RB_47_[BRA]
___GG__CG____AAAA_
38._RB_47_[BRA]
___GG__CG____AAAA_
39._RB_47_[BRA]
___GG__CG____AAAA_
40._RB_47_[BRA]
___GG__CG____AAAA_
41._RB_47_[BRA]
___GG__CG____AAAA_
42._RB_47_[BRA]
___GG__CG____AAAA_
43._RB_47_[BRA]
___GG__CG____AAAA_
44._RB_47_[BRA]
___GG__CG____AAAA_
45._RB_47_[BRA]
___GG__CG____AAAA_
46._RB_47_[BRA]
___GG__CG____AAAA_
47._RUQ_135
_____CC____GG_AAGG
48._RUQ_135
___GG__CG____AAAA_
49._RUQ_135
__AA__GG_CC__GG_AAGG
50._GC-05-101-3-3
AACCAAGGCC_CGGGAAAAGGAAAACC
 2930313233343536373839404142
_Input profile
GGAATTGGGGGGCCAAGGGGAACCGGCC
1._RB_47_[BRA]
GGAA___GG_AAGG_AA___
2._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
3._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
4._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
5._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGAACCGGCC
6._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGAACCGGCC
7._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGAACCGGCC
8._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
9._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
10._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
11._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
12._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
13._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
14._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
15._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
16._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
17._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
18._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
19._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
20._GC-05-101-3-03
GGAATTGGGGGGCCAAGGGGAACCGGCC
21._GC-05-161-4-14
GGAATTGGGGGGCCAAGGGGAACCGGCC
22._RB_47_[BRA]
GGAA___GG_AAGG_AA___
23._RB_47_[BRA]
GGAA___GG_AAGG_AA___
24._GC-08-065-1-87
GGAATTGGGGGGCCAAGGGGAACCGGCC
25._GC-05-101-3-03
GGATTTGGGGGGCCAAGGGGAACCGGCC
26._RB_47_[BRA]
GGAA___GG_AAGG_AA___
27._RB_47_[BRA]
GGAA___GG_AAGG_AA___
28._RB_47_[BRA]
GGAA___GG_AAGG_AA___
29._RB_47_[BRA]
GGAA___GG_AAGG_AA___
30._RB_47_[BRA]
GGAA___GG_AAGG_AA___
31._RB_47_[BRA]
GGAA___GG_AAGG_AA___
32._RB_47_[BRA]
GGAA___GG_AAGG_AA___
33._RB_47_[BRA]
GGAA___GG_AAGG_AA___
34._RB_47_[BRA]
GGAA___GG_AAGG_AA___
35._RB_47_[BRA]
GGAA___GG_AAGG_AA___
36._RB_47_[BRA]
GGAA___GG_AAGG_AA___
37._RB_47_[BRA]
GGAA___GG_AAGG_AA___
38._RB_47_[BRA]
GGAA___GG_AAGG_AA___
39._RB_47_[BRA]
GGAA___GG_AAGG_AA___
40._RB_47_[BRA]
GGAA___GG_AAGG_AA___
41._RB_47_[BRA]
GGAA___GG_AAGG_AA___
42._RB_47_[BRA]
GGAA___GG_AAGG_AA___
43._RB_47_[BRA]
GGAA___GG_AAGG_AA___
44._RB_47_[BRA]
GGAA___GG_AAGG_AA___
45._RB_47_[BRA]
GG____GG__GG_____
46._RB_47_[BRA]
GGAT___GG_AAGG_AA___
47._RUQ_135
GG___GGGGCCAAGG_AACC__
48._RUQ_135
GGAA___GG_AAGG_AG___
49._RUQ_135
CC___GGGG_____CC__
50._GC-05-101-3-3
CCAAAACCGGGGCCAACCCCAAGGGGGG
 4344454647484950515253545556
_Input profile
GTTTTTAAAGAACCCCGGAATTCCCCTT
1._RB_47_[BRA]
__TT________CCCC_
2._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAATTCCCCTT
3._GC-08-065-1-87
GTTTTTAAAGAACCCCGG_TTCCCCTT
4._GC-05-161-4-14
GTTTTTAAAGAACCCCGGAATTCCCCTT
5._GC-05-101-3-03
GTTTTTAAAGAACCCCGGAATTCCCCTT
6._GC-05-101-3-03
GTTTTTAAAGAACCCCGGAATTCCCCTT
7._GC-05-101-3-03
GTTTTTAAAGAACCCCGGAATTCCCCTT
8._GC-05-161-4-14
GTTTTTAAAGAACCCCGGAATTCCCCTT
9._GC-05-161-4-14
GTTTTTAAAGAACCCCGGAATTCCCCTT
10._GC-05-161-4-14
GTTTTTAAAGAACCCCGGAATTCCCCTT
11._GC-05-161-4-14
GTTTTTAAAGAACCCCGGAATTCCCCTT
12._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAATTCCCCTT
13._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAATTCCCCTT
14._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAATTCCCCTT
15._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAATTCCCCTT
16._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAATTCCCCTT
17._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAA_CCCCTT
18._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAATTCCCCTT
19._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAATTCCCCTT
20._GC-05-101-3-03
GTTTTTAAAGAACC_GGAATTCCCCTT
21._GC-05-161-4-14
GTTTTTAAAGAACCCCGGAATT_CCTT
22._RB_47_[BRA]
__TT________CCCC_
23._RB_47_[BRA]
__TT________CCCC_
24._GC-08-065-1-87
GTTTTTAAAGAACCCCGGAATTCCCCTT
25._GC-05-101-3-03
GTTTTTAAAGAACCCCGGAATTCCCCTT
26._RB_47_[BRA]
__TT________CCCC_
27._RB_47_[BRA]
__TT________CCCC_
28._RB_47_[BRA]
__TT________CCCC_
29._RB_47_[BRA]
__TT________CCCC_
30._RB_47_[BRA]
__TT________CCCC_
31._RB_47_[BRA]
__TT________CCCC_
32._RB_47_[BRA]
__TT________CCCC_
33._RB_47_[BRA]
__TT________CCCC_
34._RB_47_[BRA]
__TT________CCCC_
35._RB_47_[BRA]
__TT________CCCC_
36._RB_47_[BRA]
__TT________CCCC_
37._RB_47_[BRA]
__TT________CCCC_
38._RB_47_[BRA]
__TT________CCCC_
39._RB_47_[BRA]
__TT________CCCC_
40._RB_47_[BRA]
__TT________CCCC_
41._RB_47_[BRA]
__TT________CCCC_
42._RB_47_[BRA]
__TT________CCCC_
43._RB_47_[BRA]
__TT________CCCC_
44._RB_47_[BRA]
__TT_________CC_
45._RB_47_[BRA]
__TT________CC__
46._RB_47_[BRA]
__TT________CCCC_
47._RUQ_135
GTTT__AG_____CTCC_TT
48._RUQ_135
__TT________CCCC_
49._RUQ_135
_TT_AA_______CC__
50._GC-05-101-3-3
AC_AA_AGAAGG_GGAAAGGGGGAA
 5758596061626364656667686970
_Input profile
GGCCCCACGGGGACAAGGGGAACCCGAA
1._RB_47_[BRA]
__CCACGG_ACAAGGGG___AA
2._GC-08-065-1-87
GGCCCC_GGGGACAAGGGGAACCCGAA
3._GC-08-065-1-87
GGCCCC_GGGGACAAGGGGAACCCGAA
4._GC-05-161-4-14
GGCCCCCCGGGGACAAGGGGAACCCGAA
5._GC-05-101-3-03
GGCCCCCCGGGGACAAGGGGAACCCGAA
6._GC-05-101-3-03
GGCCCCCCGGGGACAAGGGGAACCCGAA
7._GC-05-101-3-03
GGCCCCCCGGGGACAAGGGGAACCCGAA
8._GC-05-161-4-14
GGCCCCCCGGGGACAAGGGGAACCCGAA
9._GC-05-161-4-14
GGCCCCCCGGGGACAAGGGGAACCCGAA
10._GC-05-161-4-14
GGCCCCCCGGGGACAAGGGGAACCCGAA
11._GC-05-161-4-14
GGCCCCCCGGGGACAAGGGGAACCCGAA
12._GC-08-065-1-87
GGCCCCCCGGGGACAAGGGGAACCCGAA
13._GC-08-065-1-87
GGCCCCCCGGGGACAAGGGGAACCCGAA
14._GC-08-065-1-87
GGCCCCCCGGGGACAAGGGGAACCCGAA
15._GC-08-065-1-87
GGCCCCCCGGGGACAAGGGGAACCCGAA
16._GC-08-065-1-87
GGCCCCCCGGGGACAAGGGGAACCCGAA
17._GC-08-065-1-87
GGCCCCCCGGGGACAAGGGGAACCCGAA
18._GC-08-065-1-87
GGCCCCCCGGGGAC_GGGGAACCCGAA
19._GC-08-065-1-87
GGCCCCCCGGGGACAAGGGGAACCCGAA
20._GC-05-101-3-03
GGCCCCCCGGGGACAAGGGGAACCCGAA
21._GC-05-161-4-14
GGCCCCCCGGGGACAAGGGGAACCCGAA
22._RB_47_[BRA]
__CC_GG_ACAAGGGG___AA
23._RB_47_[BRA]
__CC_GG_ACAAGGGG___AA
24._GC-08-065-1-87
GGCCCCCCGGGGACAAGGGGAACCCGAA
25._GC-05-101-3-03
GGCCCCCCGGGGACAAGGGGAACCCGAA
26._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
27._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
28._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
29._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
30._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
31._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
32._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
33._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
34._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
35._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
36._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
37._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
38._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
39._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
40._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
41._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
42._RB_47_[BRA]
__CCCCGG_AC_GGGG___AA
43._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
44._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
45._RB_47_[BRA]
__CCCCGG_ACAA_GG___AA
46._RB_47_[BRA]
__CCCCGG_ACAAGGGG___AA
47._RUQ_135
-CCCCCC_GGACAAGGGGAA___
48._RUQ_135
__CCCCGG_ACAAGGGG___AA
49._RUQ_135
_CC_CC_GGACAA____CG_
50._GC-05-101-3-3
GGGGGGCCGGGGACAACCCCAA___
 7172737475767778798081828384
_Input profile
CTCCGGCCACGGACCCCCAAACCCCCTT
1._RB_47_[BRA]
CT_____ACCC___CCCCTT
2._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
3._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
4._GC-05-161-4-14
CTCCGGCCACGGACCCCCAAACCCCCTT
5._GC-05-101-3-03
CTCCGGCCACGGACCCCCAAACCCCCTT
6._GC-05-101-3-03
CTCCGGCCACGGACCCCCAAACCCCCTT
7._GC-05-101-3-03
CTCCGGCCACGGACCCCCAAACCCCCTT
8._GC-05-161-4-14
CTCCGGCCACGGACCCCCAAACCCCCTT
9._GC-05-161-4-14
CTCCGGCCACGGACCCCCAAACCCCCTT
10._GC-05-161-4-14
CTCCGGCCACGGACCCCCAAACCCCCTT
11._GC-05-161-4-14
CTCCGGCCACGGACCCCCAAACCCCCTT
12._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
13._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
14._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
15._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
16._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
17._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
18._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
19._GC-08-065-1-87
CT_GGCCACGGACCCCCAAACCCCCTT
20._GC-05-101-3-03
CTCCGGCCACGGACCCCCAAACCCCCTT
21._GC-05-161-4-14
_CCGGCCACGGACCCCCAAACCCCCTT
22._RB_47_[BRA]
CT_____ACCC___CCCCTT
23._RB_47_[BRA]
CT_____ACCC___CCCCTT
24._GC-08-065-1-87
CTCCGGCCACGGACCCCCAAACCCCCTT
25._GC-05-101-3-03
CTCCGGCCACGGACCCCCAAACCCCCTT
26._RB_47_[BRA]
CT_____ACCC___CCCCTT
27._RB_47_[BRA]
CT_____ACCC___CCCCTT
28._RB_47_[BRA]
CT_____ACCC___CCCCTT
29._RB_47_[BRA]
CT_____ACCC___CCCCTT
30._RB_47_[BRA]
CT_____ACCC___CCCCTT
31._RB_47_[BRA]
CT_____ACCC___CCCCTT
32._RB_47_[BRA]
CT_____ACCC___CCCCTT
33._RB_47_[BRA]
CT_____ACCC___CCCCTT
34._RB_47_[BRA]
CT_____ACCC___CCCCTT
35._RB_47_[BRA]
CT_____ACCC___CCCCTT
36._RB_47_[BRA]
CT_____ACCC___CCCCTT
37._RB_47_[BRA]
CT_____ACCC___CCCCTT
38._RB_47_[BRA]
CT_____ACCC___CCCCTT
39._RB_47_[BRA]
CT_____ACCC___CCCCTT
40._RB_47_[BRA]
CT_____ACCC___CCCCTT
41._RB_47_[BRA]
CT_____ACCC___CCCCTT
42._RB_47_[BRA]
CT_____ACCC___CCCCTT
43._RB_47_[BRA]
CT_____ACCC___CCCCTT
44._RB_47_[BRA]
______ACCC___CCCCTT
45._RB_47_[BRA]
CT_____ACCC___CCCC_
46._RB_47_[BRA]
CT_____ACCC___CCCCTT
47._RUQ_135
______ACCC__ACCC__
48._RUQ_135
CT_____ACCC___CCCCCT
49._RUQ_135
_______GG____CC_
50._GC-05-101-3-3
AGCCGGCCAC_AC_GGAAACGGGG_
 8586878889909192      
_Input profile
TTAACCCTGGCTTTGGX_XX_XX_XX_XX_XX_X
1._RB_47_[BRA]
_AA_CTGGCT__X_XX_XX_XX_XX_XX_X
2._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
3._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
4._GC-05-161-4-14
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
5._GC-05-101-3-03
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
6._GC-05-101-3-03
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
7._GC-05-101-3-03
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
8._GC-05-161-4-14
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
9._GC-05-161-4-14
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
10._GC-05-161-4-14
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
11._GC-05-161-4-14
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
12._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
13._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
14._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
15._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
16._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
17._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
18._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
19._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
20._GC-05-101-3-03
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
21._GC-05-161-4-14
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
22._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
23._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
24._GC-08-065-1-87
TTAACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
25._GC-05-101-3-03
_AACCCTGGCCTTGGX_XX_XX_XX_XX_XX_X
26._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
27._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
28._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
29._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
30._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
31._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
32._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
33._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
34._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
35._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
36._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
37._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
38._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
39._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
40._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
41._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
42._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
43._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
44._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
45._RB_47_[BRA]
___CTGGCC__X_XX_XX_XX_XX_XX_X
46._RB_47_[BRA]
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
47._RUQ_135
_AACCCTGG___X_XX_XX_XX_XX_XX_X
48._RUQ_135
_AA_CTGGCC__X_XX_XX_XX_XX_XX_X
49._RUQ_135
________X_XX_XX_XX_XX_XX_X
50._GC-05-101-3-3
AA__AGCCGGAAGGX_XX_XX_XX_XX_XX_X

Input profile: RB_47_[BRA] GC-08-065-1-87

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

1._RB_47_[BRA]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 12
 Dapeng Zhang, 2016

2._RB_47_[BRA] GC-08-065-1-87

99.5 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

3._RB_47_[BRA] GC-08-065-1-87

99.4 %
90 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

4._RB_47_[BRA] GC-05-161-4-14

98.9 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

5._RB_47_[BRA] GC-05-101-3-03

98.9 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

6._RB_47_[BRA] GC-05-101-3-03

98.9 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

7._RB_47_[BRA] GC-05-101-3-03

98.9 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

8._RB_47_[BRA] GC-05-161-4-14

98.9 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

9._RB_47_[BRA] GC-05-161-4-14

98.9 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

10._RB_47_[BRA] GC-05-161-4-14

98.9 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

11._RB_47_[BRA] GC-05-161-4-14

98.9 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

12._RB_47_[BRA] GC-08-065-1-87

98.9 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

13._RB_47_[BRA] GC-08-065-1-87

98.9 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

14._RB_47_[BRA] GC-08-065-1-87

98.9 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

15._RB_47_[BRA] GC-08-065-1-87

98.9 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

16._RB_47_[BRA] GC-08-065-1-87

98.9 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

17._RB_47_[BRA] GC-08-065-1-87

98.9 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

18._RB_47_[BRA] GC-08-065-1-87

98.9 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

19._RB_47_[BRA] GC-08-065-1-87

98.9 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

20._RB_47_[BRA] GC-05-101-3-03

98.9 %
90 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

21._RB_47_[BRA] GC-05-161-4-14

98.9 %
90 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

22._RB_47_[BRA]

98.7 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 1
 Dapeng Zhang, 2016

23._RB_47_[BRA]

98.7 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 2
 Dapeng Zhang, 2016

24._RB_47_[BRA] GC-08-065-1-87

98.4 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

25._RB_47_[BRA] GC-05-101-3-03

98.4 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP3
 Mars, 2018

26._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 11
 Dapeng Zhang, 2016

27._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 9
 Dapeng Zhang, 2016

28._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

29._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 3
 Dapeng Zhang, 2016

30._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 4
 Dapeng Zhang, 2016

31._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

32._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 3
 Dapeng Zhang, 2016

33._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 4
 Dapeng Zhang, 2016

34._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 5
 Dapeng Zhang, 2016

35._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 1 > FP
 Dapeng Zhang, 2016

36._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 3
 Dapeng Zhang, 2016

37._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 4
 Dapeng Zhang, 2016

38._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 5
 Dapeng Zhang, 2016

39._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 6
 Dapeng Zhang, 2016

40._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 7
 Dapeng Zhang, 2016

41._RB_47_[BRA]

97.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 8
 Dapeng Zhang, 2016

42._RB_47_[BRA]

97.4 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8187 10
 Dapeng Zhang, 2016

43._RB_47_[BRA]

97.4 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 5
 Dapeng Zhang, 2016

44._RB_47_[BRA]

97.3 %
37 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5414 2
 Dapeng Zhang, 2016

45._RB_47_[BRA]

96.8 %
31 shared markers

 View  View all  Clone  Any
Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

46._RB_47_[BRA]

96.2 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 5303 2 > FP
 Dapeng Zhang, 2016

47._RB_47_[BRA] RUQ_135

95 %
40 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

48._RB_47_[BRA] RUQ_135

92.3 %
39 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

49._RB_47_[BRA] RUQ_135

85.4 %
24 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

50._RB_47_[BRA] GC-05-101-3-3

51.3 %
77 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 5, Block: 3, Rep: 3, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP872 30TcSNP953
31TcSNP1034 32TcSNP1175 33TcSNP1111 34TcSNP577 35TcSNP90
36TcSNP998 37TcSNP150 38TcSNP28 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP1309 54TcSNP151 55TcSNP1520
56TcSNP799 57TcSNP899 58TcSNP1439 59TcSNP1442 60TcSNP193
61TcSNP25 62TcSNP364 63TcSNP144 64TcSNP230 65TcSNP560
66TcSNP723 67TcSNP731 68TcSNP701 69TcSNP1041 70TcSNP645
71TcSNP917 72Tcm003s01336581 73Tcm003s07402719 74Tcm001s00947643 75Tcm006s26664133
76Tcm002s20575712 77TcSNP529 78TcSNP1458 79TcSNP60 80TcSNP430
81TcSNP823 82TcSNP619 83TcSNP994 84TcSNP1144 85TcSNP1156
86TcSNP469 87TcSNP999 88TcSNP242 89TcSNP1253 90TcSNP1414
91TcSNP154 92TcSNP240