SNP Profiles of EB-1516   View Data

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 Key

 1234567891011121314
_Input profile
ATACCTACAGAGCTCTCTAGTTCTCTAT
1._GC-08-088-2-11
ATAACTCCAGAGCTCCCCGGTTCTCTAT
2._GC-08-088-2-11
ATAACTCCAGAGCTCCCCGGTTCTCTAT
3._GC-08-088-2-11
ATAACTCCAGAGCTCCCCGGTTCTCTAT
4._GC-08-088-2-11
ATAACTCCAGAGCTCCCCGGTTCTCTAT
5._GC-08-088-2-11
ATAACTCCAGAGCTCCCCGGTTCTCTAT
6._GC-08-088-2-11
ATAACTCCAGAGCTCCCCGGTTCTCTAT
7._GC-08-088-2-11
ATAACTCCAGAGCTCCCCGGTTCTCTAT
8._NA
_AATTCCAAAGCTCCCCGGTTCCCCAT
9._NA
_AATTCCAAAGCTCCCCGGTTCCCCAT
10._NA
_AATTCCAAAGCTCCCCGGTTCCCCAT
11._NA
_AATTCCAAAGCTCCCCGGTTCCCCAT
12._NA
_AATTCCAAAGCTCCCCGGTTCCCCAT
13._NA
_AATTCCAAAGCTCCCCGGTTCCCCAT
 1516171819202122232425262728
_Input profile
ACAAAGCGCGCCCTAACTGGATAACGCG
1._GC-08-088-2-11
ACAAAGCGCGGGCTAACTGGATATCCGG
2._GC-08-088-2-11
ACAAAGCGCGGGCTAACTGGATATCCGG
3._GC-08-088-2-11
ACAAAGCGCGGGCTAACTGGATATCCGG
4._GC-08-088-2-11
ACAAAGCGCGGGCTAACTGGATATCCGG
5._GC-08-088-2-11
ACAAAGCGCGGGCTAACTGGATATCCGG
6._GC-08-088-2-11
ACAAAGCGCGGGCTAACTGGATATCCGG
7._GC-08-088-2-11
ACAAAGCGCGGGCTAACTGGATATCCGG
8._NA
CCAAGGCCCGGGCCAACCGGTTATCCCG
9._NA
CCAAGGCCCGGGCCAACCGGTTATCCCG
10._NA
CCAAGGCCCGGGCCAACCGGTTATCCCG
11._NA
CCAAGGCCCGGGCCAACCGGTTATCCCG
12._NA
CCAAGGCCCGGGCCAACCGGTTATCCCG
13._NA
CCAAGGCCCGGGCCAACCGGTTATCCCG
 2930313233343536373839404142
_Input profile
ATTTGTAGCCCCAGGTGTTTAGCTAGCC
1._GC-08-088-2-11
TTTTGTAGCGCCAGGTGGTTAGCCAGCG
2._GC-08-088-2-11
TTTTGTAGCGCCAGGTGGTTAGCCAGCG
3._GC-08-088-2-11
TTTTGTAGCGCCAGGTGGTTAGCCAGCG
4._GC-08-088-2-11
TTTTGTAGCGCCAGGTGGTTAGCCAGCG
5._GC-08-088-2-11
TTTTGTAGCGCCAGGTGGTTAGCCAGCG
6._GC-08-088-2-11
TTTTGTAGCGCCAGGTGGTTAGCCAGCG
7._GC-08-088-2-11
TTTTGTAGCGCCAGGTGGTTAGCCAGCG
8._NA
AATTGGAGCGCCAAGTGGTTGGCCAGGG
9._NA
AATTGGAGCGCCAAGTGGTTGGCCAGGG
10._NA
AATTGGAGCGCCAAGTGGTTGGCCAGGG
11._NA
AATTGGAGCGCCAAGTGGTTGGCCAGGG
12._NA
AATTGGAGCGCCAAGTGGTTGGCCAGGG
13._NA
AA_GGAGCGCCAAGTGGTTGGCCAGGG
 4344454647484950515253545556
_Input profile
GGTTCCAAAGAACCACAGAGGTTTCTCT
1._GC-08-088-2-11
GGTTTTAAAGAACCACGGAA_TTTTCC
2._GC-08-088-2-11
GGTTTTAAAG_CCACGGAATTTTTTCC
3._GC-08-088-2-11
GGTTTTAAAGAACCACGGAATTTTTTCC
4._GC-08-088-2-11
GGTTTTAAAGAACCACGGAATTTTTTCC
5._GC-08-088-2-11
GGTTTTAAAGAACCACGGAATTTTTTCC
6._GC-08-088-2-11
GGTTTTAAAGAACCACGGAATTTTTTCC
7._GC-08-088-2-11
GGTTTTAAAGAACCACGGAATTTTTTCC
8._NA
GTATCCAAGGAGCCCCGGAGTTTTCCCT
9._NA
GTATCCAAGGAGCCCCGGAGTTTTCCCT
10._NA
GTATCCAAGGAGCCCCGGAGTTTTCCCT
11._NA
GTATCCAAGGAGCCCCGGAGTTTTCCCT
12._NA
GTATCCAAGGAGCCCCGGAGTTTTCCCT
13._NA
GTATCCAAGGAGCCCCGGAGTTTTCCCT
 5758596061626364656667686970
_Input profile
TTAGCCCTCCACCGGGAAAAGTGGAGCT
1._GC-08-088-2-11
TTGGCCCCTTCCCCGGCCAGGTGGAGCT
2._GC-08-088-2-11
TTGGCCCCTTCC_GGCCAGGTGGAGCT
3._GC-08-088-2-11
TTGGCCCCTTCCCCGGCCAGGTGGAGCT
4._GC-08-088-2-11
TTGGCCCCTTCCCCGGCCAGGTGGAGCT
5._GC-08-088-2-11
TTGGCCCCTTCCCCGGCCAGGTGGAGCT
6._GC-08-088-2-11
TTGGCCCCTTCCCCGGCCAGGTGGAGCT
7._GC-08-088-2-11
TTGGCCCCTTCCCCGGCCAGGTGGAGCT
8._NA
TT_CCCTCCACCCAGCCAATTGGGGTT
9._NA
TTAACCCTCCACCCAGCCAATTGGGGTT
10._NA
TTAACCCTCCACCCAGCCAATTGGGGTT
11._NA
TTAACCCTCCACCCAGCCAATTGGGGTT
12._NA
TTAACCCTCCACCCAGCCAATTGGGGTT
13._NA
TTAACCCTCCACCCAGCCAATTGGGGTT
 7172737475767778798081828384
_Input profile
CCAGCTACAGCCACAAACCGCCATACTT
1._GC-08-088-2-11
CCAGCTACAGACAAAAACCGCCAAACTT
2._GC-08-088-2-11
CCAGCTACAGACAAAAACCGCCAAACTT
3._GC-08-088-2-11
CCAGCTACAGACAAAAACCGCCAAACTT
4._GC-08-088-2-11
CCAGCTACAGACAAAAACCGCCAAACTT
5._GC-08-088-2-11
CCAGCTACAGACAAAAACCGCCAAACTT
6._GC-08-088-2-11
CCAGCTACAGACAAAAACCGCCAAACTT
7._GC-08-088-2-11
CCAGCTACAGACAAAAACCGCCAAACTT
8._NA
CCGGTTACGGACACAGCCCGCTAACCTT
9._NA
CCGGTTACGGACACAGCCCGCTAACCTT
10._NA
CCGGTTACGGACACAGCCCGCTAACCTT
11._NA
CCGGTTACGGACACAGCCCGCTAACCTT
12._NA
CCGGTTACGGACACAGCCCGCTAACCTT
13._NA
CCGGTTACGGACACAGCCCGCTAACCTT
 85868788899091929394    
_Input profile
CTCTCCAGCTCCGTCTATGGX_XX_XX_XX_X
1._GC-08-088-2-11
TTCTTTAGCCCCGTCCAAGGX_XX_XX_XX_X
2._GC-08-088-2-11
TTCTTTAGCCCCGTCCAAGGX_XX_XX_XX_X
3._GC-08-088-2-11
TTCTTTAGCCCCGTCCAAGGX_XX_XX_XX_X
4._GC-08-088-2-11
TTCTTTAGCCCCGTCCAAGGX_XX_XX_XX_X
5._GC-08-088-2-11
TTCTTTAGCCCCGTCCAAGGX_XX_XX_XX_X
6._GC-08-088-2-11
TTCTTTAGCCCCGTCCAAGGX_XX_XX_XX_X
7._GC-08-088-2-11
TTCTTTAGCCCCGTCCAAGGX_XX_XX_XX_X
8._NA
_CCCTAACTCCTTCTAAGGX_XX_XX_XX_X
9._NA
TTCCCTAACTCCTTCT_GGX_XX_XX_XX_X
10._NA
TTCCCTAACTCCTTCTAAGGX_XX_XX_XX_X
11._NA
TTCCCTAACTCCTTCTAAGGX_XX_XX_XX_X
12._NA
TTCCCTAACTCCTTCTAAGGX_XX_XX_XX_X
13._NA
TTCCCTAACTCCTTCTAAGGX_XX_XX_XX_X

Input profile: EB_1516 GC-08-088-2-11

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

1._EB_1516 GC-08-088-2-11

79 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

2._EB_1516 GC-08-088-2-11

78.8 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

3._EB_1516 GC-08-088-2-11

78.7 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

4._EB_1516 GC-08-088-2-11

78.7 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

5._EB_1516 GC-08-088-2-11

78.7 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

6._EB_1516 GC-08-088-2-11

78.7 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

7._EB_1516 GC-08-088-2-11

78.7 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

8._EB_1516 NA

68.7 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

9._EB_1516 NA

68.5 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

10._EB_1516 NA

68.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

11._EB_1516 NA

68.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

12._EB_1516 NA

68.3 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

13._EB_1516 NA

67.9 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP1096 8TcSNP1060 9TcSNP1165 10TcSNP429
11TcSNP75 12TcSNP891 13TcSNP122 14TcSNP316 15TcSNP521
16TcSNP860 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP823 84TcSNP619 85TcSNP994
86TcSNP1144 87TcSNP1156 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1253 92TcSNP1414 93TcSNP154 94TcSNP240