SNP Profiles of PA-169   View Data

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 Key

 1234567891011121314
_Input profile
AAACCTACGGAGCCCCCCCCGGTTCCTT
1._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
2._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
3._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
4._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
5._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
6._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
7._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
8._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
9._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
10._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
11._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
12._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
13._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
14._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
15._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
16._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
17._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
18._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
19._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
20._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
21._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
22._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
23._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
24._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
25._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
26._GC-03-028-3-02
AAACCTACGGAGCCCCCCCCGGTTCCTT
27._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
28._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
29._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
30._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
31._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
32._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
33._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
34._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
35._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
36._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
37._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
38._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
39._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
40._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
41._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
42._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
43._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
44._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
45._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
46._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
47._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
48._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
49._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
50._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
51._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
52._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
53._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
54._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
55._GC-08-094-2-17
AAACCTACGGAGCCCCCCCCGGTTCCTT
56._RUQ_1479
__CTAC__CC_CC__TTCC_
57._PA_169_[PER]
AAACCTAC____CCCCGG_CC_
58._RUQ_1479
AAACCTAC____CCCCGG_CC_
59._RUQ_1479
___AC__CC_______
60._RUQ_1479
AAAC_ACGGAG_GGGG_GGAAGGAA
61._MITC-000600
AAAC_ACGGAG_GGGG_GGAAGGAA
 1516171819202122232425262728
_Input profile
AACCAAAGCCCCTTAATTGGAAAACCGG
1._GC-08-094-2-17
AACCAAAGCCCCTTAATTGGAAAACCGG
2._GC-08-094-2-17
AACCAAAGCCCCTTAATTGGAAAACCGG
3._GC-08-094-2-17
AACCAAAGCCCCTTAATTGGAAAACCGG
4._GC-03-028-3-02
AACCAAAGCCCCTTAATTGGAAAACCGG
5._GC-03-028-3-02
AACCAAAGCCCCTTAATTGGAAAACCGG
6._GC-03-028-3-02
AACCAAAGCCCCTTAATTGGAAAACCGG
7._GC-03-028-3-02
AACCAAAGCCCCTTAATTGGAAAACCGG
8._GC-03-028-3-02
AACCAAAGCCCCTTAATTGGAAAACCGG
9._GC-03-028-3-02
AACCAAAGCCCCTTAATTGGAAAACCGG
10._GC-03-028-3-02
AACCAAAGCCCCTTAATTGGAAAACCGG
11._GC-03-028-3-02
AACCAAAGCCCCTTAATTGGAAAACCGG
12._GC-08-094-2-17
AACCAAAGCCCCTTAATTGGAAAACCGG
13._GC-08-094-2-17
AACCAAAGCCCCTTAATTGGAAAACCGG
14._GC-08-094-2-17
AACCAAAGCCCCTTAATTGGAAAACCGG
15._GC-08-094-2-17
AACCAAAGCCCCTTAATTGGAAAACCGG
16._GC-08-094-2-17
AACCAAAGCCCCTTAATTGGAAAACCGG
17._GC-08-094-2-17
AACCAAAGCCCCTTAATTGGAAAACCGG
18._GC-08-094-2-17
AACCAAAGCCCCTTAATTGGAAAACCGG
19._GC-08-094-2-17
AACCAAAGCCCCTTAATTGGAAAACCGG
20._GC-08-094-2-17
AACCAAAGCCCCTTAATTGGAAAACCGG
21._GC-03-028-3-02
AACCAAAGCCCCTTAATTGGAAAACCGG
22._GC-03-028-3-02
AACCAAAGCCCCTTAATTGGAAAACCGG
23._GC-08-094-2-17
AACCAAAGCCCCTTAATTGGAAAACCGG
24._GC-08-094-2-17
AACCAAAGCCCC_AATTGGAAAACCGG
25._GC-08-094-2-17
AACCAAAGCCCCTTAATTGGAAAACCGG
26._GC-03-028-3-02
AACCAAAGCCCCTTAATTGGAAAACCGG
27._PA_169_[PER]
___AG______AAAA_GG
28._PA_169_[PER]
___AG______AAAA_GG
29._PA_169_[PER]
___AG______AAAA_GG
30._PA_169_[PER]
___AG______AAAA_GG
31._PA_169_[PER]
___AG______AAAA_GG
32._PA_169_[PER]
___AG______AAAA_GG
33._PA_169_[PER]
___AG______AAAA_GG
34._PA_169_[PER]
___AG______AAAA_GG
35._PA_169_[PER]
___AG______AAAA_GG
36._PA_169_[PER]
___AG______AAAA_GG
37._PA_169_[PER]
___AG______AAAA_GG
38._PA_169_[PER]
___AG______AAAA_GG
39._PA_169_[PER]
___AG______AAAA_GG
40._PA_169_[PER]
___AG______AAAA_GG
41._PA_169_[PER]
___AG______AAAA_GG
42._PA_169_[PER]
___AG______AAAA_GG
43._PA_169_[PER]
___AG______AAAA_GG
44._PA_169_[PER]
___AG______AAAA_GG
45._PA_169_[PER]
___AG______AAAA_GG
46._PA_169_[PER]
___AG______AAAA_GG
47._PA_169_[PER]
___AG______AAAA_GG
48._PA_169_[PER]
___AG______AAAA_GG
49._PA_169_[PER]
___AG______AAAA_GG
50._PA_169_[PER]
___AG______AAAA_GG
51._PA_169_[PER]
___AG______AAAA_GG
52._PA_169_[PER]
___AG______AAAA_GG
53._PA_169_[PER]
___AG______AAAA_GG
54._PA_169_[PER]
___AG______AAAA_GG
55._GC-08-094-2-17
AACCAAAGCCCCTTAATTGGAAAACCGG
56._RUQ_1479
_____CC___GG_AACCGG
57._PA_169_[PER]
___AG______AAAA_GG
58._RUQ_1479
___AG______AAAA_GG
59._RUQ_1479
___AGTT________GG
60._RUQ_1479
TTCCAGAGGG_AAAGAAGGAAAAGGCC
61._MITC-000600
TTCCAGAGGG_AAAGAAGGAAAAGGCC
 2930313233343536373839404142
_Input profile
AATTTTAGGGCCAAGTGGGTAATTGGCC
1._GC-08-094-2-17
AATTTTAGGGCCAAGTGGGTAATTGGCC
2._GC-08-094-2-17
AATTTTAGGGCCAAGTGGGTAATTGGCC
3._GC-08-094-2-17
AATTTTAGGGCCAAGTGGGTAATTGGCC
4._GC-03-028-3-02
AATTTTAGGGCCAAGTGGGTAATTGGCC
5._GC-03-028-3-02
AATTTTAGGGCCAAGTGGGTAATTGGCC
6._GC-03-028-3-02
AATTTTAGGGCCAAGTGGGTAATTGGCC
7._GC-03-028-3-02
AATTTTAGGGCCAAGTGGGTAATTGGCC
8._GC-03-028-3-02
AATTTTAGGGCCAAGTGGGTAATTGGCC
9._GC-03-028-3-02
AATTTTAGGGCCAAGTGGGTAATTGGCC
10._GC-03-028-3-02
AATTTTAGGGCCAAGTGGGTAATTGGCC
11._GC-03-028-3-02
AATTTTAGGGCCAAGTGGGTAATTGGCC
12._GC-08-094-2-17
AATTTTAGGGCCAAGTGGGTAATTGGCC
13._GC-08-094-2-17
AATTTTAGGGCCAAGTGGGTAATTGGCC
14._GC-08-094-2-17
AATTTTAGGGCCAAGTGGGTAATTGGCC
15._GC-08-094-2-17
AATTTTAGGGCCAAGTGGGTAATTGGCC
16._GC-08-094-2-17
AATTTTAGGGCCAAGTGGGTAATTGGCC
17._GC-08-094-2-17
AATTTTAGGGCCAAGTGGGTAATTGGCC
18._GC-08-094-2-17
AATTTTAGGGCCAAGTGGGTAATTGGCC
19._GC-08-094-2-17
AATTTTAGGGCCAAGTGGGTAATTGGCC
20._GC-08-094-2-17
AATTTTAGGGCCAAGTGGGTAATTGGCC
21._GC-03-028-3-02
AATTTTAGGGCCAAGTGGGTAATTGGCC
22._GC-03-028-3-02
AATTTTAGGGCCAAGTGGGTAATTGGCC
23._GC-08-094-2-17
AA_TTAGGGCCAAGTGGGTAATTGGCC
24._GC-08-094-2-17
AATTTTAGGGCCAAGTGGGTAATTGGCC
25._GC-08-094-2-17
AATTTTAGGGCCAAGTGGGTAATTGGCC
26._GC-03-028-3-02
AATTTTAGGGCCAAGTGGGTAATTGGCC
27._PA_169_[PER]
AA___GG_AAGT__AA___
28._PA_169_[PER]
AA___GG_AAGT__AA___
29._PA_169_[PER]
AA___GG_AAGT__AA___
30._PA_169_[PER]
AA___GG_AAGT__AA___
31._PA_169_[PER]
AA___GG_AAGT__AA___
32._PA_169_[PER]
AA___GG_AAGT__AA___
33._PA_169_[PER]
AA___GG_AAGT__AA___
34._PA_169_[PER]
AA___GG_AAGT__AA___
35._PA_169_[PER]
AA___GG_AAGT__AA___
36._PA_169_[PER]
AA___GG_AAGT__AA___
37._PA_169_[PER]
AA___GG_AAGT__AA___
38._PA_169_[PER]
AA___GG_AAGT__AA___
39._PA_169_[PER]
AA___GG_AAGT__AA___
40._PA_169_[PER]
AA___GG_AAGT__AA___
41._PA_169_[PER]
AA___GG_AAGT__AA___
42._PA_169_[PER]
AA___GG_AAGT__AA___
43._PA_169_[PER]
AA___GG_AAGT__AA___
44._PA_169_[PER]
AA___GG_AAGT__AA___
45._PA_169_[PER]
AA___GG_AAGT__AA___
46._PA_169_[PER]
AA___GG_AAGT__AA___
47._PA_169_[PER]
AA___GG_AAGT__AA___
48._PA_169_[PER]
AA___GG_AAGT__AA___
49._PA_169_[PER]
AA___GG_AAGT__AA___
50._PA_169_[PER]
AA___GG_AAGT__AA___
51._PA_169_[PER]
AA___GG_AAGT__AA___
52._PA_169_[PER]
AA___GG_AAGT__AA___
53._PA_169_[PER]
AA___GG_AAGT__AA___
54._PA_169_[PER]
AA___GG_AAGT__AA___
55._GC-08-094-2-17
AATTTTAGGGCCAAGTGGGTAACTGGCC
56._RUQ_1479
___AGGGCCAAGT__AATT__
57._PA_169_[PER]
AA___GG_AAGT__AA___
58._RUQ_1479
AA___GG_AAGT__AG___
59._RUQ_1479
____GG_AA____TT__
60._RUQ_1479
AAAAAAAGGGCCAAACCCACAAAAGGGG
61._MITC-000600
AAAAAAAGGGCCAAACCCACAAAAGGGG
 4344454647484950515253545556
_Input profile
GGTTCTAAGGAACCCCGGAGGTTTCCTT
1._GC-08-094-2-17
GGTTCTAAGGAACCCCGGAGGTTTCCTT
2._GC-08-094-2-17
GGTTCTAAGGAACCCCGGAGGTTTCCTT
3._GC-08-094-2-17
GGTTCTAAGGAACCCCGGAGGTTTCCTT
4._GC-03-028-3-02
GGTTCTAAGGAACCCCGGAGGTTTCCTT
5._GC-03-028-3-02
GGTTCTAAGGAACCCCGGAGGTTTCCTT
6._GC-03-028-3-02
GGTTCTAAGGAACCCCGGAGGTTTCCTT
7._GC-03-028-3-02
GGTTCTAAGGAACCCCGGAGGTTTCCTT
8._GC-03-028-3-02
GGTTCTAAGGAACCCCGGAGGTTTCCTT
9._GC-03-028-3-02
GGTTCTAAGGAACCCCGGAGGTTTCCTT
10._GC-03-028-3-02
GGTTCTAAGGAACCCCGGAGGTTTCCTT
11._GC-03-028-3-02
GGTTCTAAGGAACCCCGGAGGTTTCCTT
12._GC-08-094-2-17
GGTTCTAAGGAACCCCGGAGGTTTCCTT
13._GC-08-094-2-17
GGTTCTAAGGAACCCCGGAGGTTTCCTT
14._GC-08-094-2-17
GGTTCTAAGGAACCCCGGAGGTTTCCTT
15._GC-08-094-2-17
GGTTCTAAGGAACCCCGGAGGTTTCCTT
16._GC-08-094-2-17
GGTTCTAAGGAACCCCGGAGGTTTCCTT
17._GC-08-094-2-17
GGTTCTAAGGAACCCCGGAGGTTTCCTT
18._GC-08-094-2-17
GGTTCTAAGGAACCCCGGAGGTTTCCTT
19._GC-08-094-2-17
GGTTCTAAGGAACCCCGGAGGTTTCCTT
20._GC-08-094-2-17
GGTTCTAAGGAACCCCGGAGGTTTCCTT
21._GC-03-028-3-02
GGTTCTAAGGAACCCCGGAGGTTTCCTT
22._GC-03-028-3-02
GGTTCT_GGAACCCCGGAGGTTTCCTT
23._GC-08-094-2-17
GGTTCTAAGGAACCCCGGAGGTTTCCTT
24._GC-08-094-2-17
GGTTCTAAGGAACCCCGGAGGTTTCCTT
25._GC-08-094-2-17
GGTTCTAAGGAACCCCGGAGGTTTCCTT
26._GC-03-028-3-02
GGTTCT_GG_CCCCGGAG_TT_TT
27._PA_169_[PER]
__CT_________CCTT
28._PA_169_[PER]
__CT_________CCTT
29._PA_169_[PER]
__CT_________CCTT
30._PA_169_[PER]
__CT_________CCTT
31._PA_169_[PER]
__CT_________CCTT
32._PA_169_[PER]
__CT_________CCTT
33._PA_169_[PER]
__CT_________CCTT
34._PA_169_[PER]
__CT_________CCTT
35._PA_169_[PER]
__CT_________CCTT
36._PA_169_[PER]
__CT_________CCTT
37._PA_169_[PER]
__CT_________CCTT
38._PA_169_[PER]
__CT_________CCTT
39._PA_169_[PER]
__CT_________CCTT
40._PA_169_[PER]
__CT_________CCTT
41._PA_169_[PER]
__CT_________CCTT
42._PA_169_[PER]
__CT_________CCTT
43._PA_169_[PER]
__CT_________CCTT
44._PA_169_[PER]
__CT_________CCTT
45._PA_169_[PER]
__CT_________CCTT
46._PA_169_[PER]
__CT_________CCTT
47._PA_169_[PER]
__CT_________CCTT
48._PA_169_[PER]
__CT_________CCTT
49._PA_169_[PER]
__CT_________CCTT
50._PA_169_[PER]
__CT_________CCTT
51._PA_169_[PER]
__CT_________CCTT
52._PA_169_[PER]
__CT_________CCTT
53._PA_169_[PER]
__CT__________TT
54._PA_169_[PER]
__CT_________CCTT
55._GC-08-094-2-17
GGTTCTAAGGAACCCCGGAGGTTTCCTT
56._RUQ_1479
GGTT__GG______TTCC_
57._PA_169_[PER]
__CT_________CCTT
58._RUQ_1479
__CT_________CCTT
59._RUQ_1479
____GG_________
60._RUQ_1479
CC_AG_GGAAGG_GGAGACAAGGAA
61._MITC-000600
CC_AG_GGAAGG_GGAGACAAGGAA
 5758596061626364656667686970
_Input profile
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
1._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
2._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
3._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
4._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
5._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
6._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
7._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
8._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
9._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
10._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
11._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
12._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
13._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
14._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
15._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
16._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
17._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
18._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
19._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
20._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
21._GC-03-028-3-02
TTGGCC_CCAAGGGGAAAAGTGGCCCG
22._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
23._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
24._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
25._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
26._GC-03-028-3-02
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
27._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
28._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
29._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
30._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
31._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
32._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
33._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
34._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
35._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
36._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
37._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
38._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
39._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
40._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
41._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
42._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
43._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
44._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
45._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
46._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
47._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
48._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
49._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
50._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
51._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
52._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
53._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
54._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
55._GC-08-094-2-17
TTGGCCCCCCAAGGGGAAAAGTGGCCCG
56._RUQ_1479
TTGGCCCCCCAA_GGAAAAGTGG__
57._PA_169_[PER]
__CC_CCAAGG_AAAAGT___
58._RUQ_1479
__CC_CCAAGG_AAAAGT___
59._RUQ_1479
_GG______AAAA_GG__
60._RUQ_1479
AAGGGGGGGGAAGGGGAAAAACGG__
61._MITC-000600
AAGGGGGGGGAAGGGGAAAAACGG__
 7172737475767778798081828384
_Input profile
AGTTCCGGCCCCAGAAGGCCAAAACTCT
1._GC-08-094-2-17
AGTTCCGGCCCCAGAAGGCCAAAACTCT
2._GC-08-094-2-17
AGTTCCGGCCCCAGAAGGCCAAAACTCT
3._GC-08-094-2-17
AGTTCCGGCCCCAGAAGGCCAAAACTCT
4._GC-03-028-3-02
AGTTCCGGCCCCAGAAGGCCAAAACTCT
5._GC-03-028-3-02
AGTTCCGGCCCCAGAAGGCCAAAACTCT
6._GC-03-028-3-02
AGTTCCGGCCCCAGAAGGCCAAAACTCT
7._GC-03-028-3-02
AGTTCCGGCCCCAGAAGGCCAAAACTCT
8._GC-03-028-3-02
AGTTCCGGCCCCAGAAGGCCAAAACTCT
9._GC-03-028-3-02
AGTTCCGGCCCCAGAAGGCCAAAACTCT
10._GC-03-028-3-02
AGTTCCGGCCCCAGAAGGCCAAAACTCT
11._GC-03-028-3-02
AGTTCCGGCCCCAGAAGGCCAAAACTCT
12._GC-08-094-2-17
AGTTCCGGCCCCAGAAGGCCAAAACTCT
13._GC-08-094-2-17
AGTTCCGGCCCCAGAAGGCCAAAACTCT
14._GC-08-094-2-17
AGTTCCGGCCCCAGAAGGCCAAAACTCT
15._GC-08-094-2-17
AGTTCCGGCCCCAGAAGGCCAAAACTCT
16._GC-08-094-2-17
AGTTCCGGCCCCAGAAGGCCAAAACTCT
17._GC-08-094-2-17
AGTTCCGGCCCCAGAAGGCCAAAACTCT
18._GC-08-094-2-17
AGTTCCGGCCCCAGAAGGCCAAAACTCT
19._GC-08-094-2-17
AGTTCCGGCCCCAGAAGGCCAAAACTCT
20._GC-08-094-2-17
AGTTCCGGCCCCAGAAGGCCAAAACTCT
21._GC-03-028-3-02
AGTTCCGGCCCCAGAAGGCCAAAACTCT
22._GC-03-028-3-02
AGTTCCGGCCCCAGAAGGCCAAAACTCT
23._GC-08-094-2-17
AGTTCCGGCCCCAGAAGGCCAAAACTCT
24._GC-08-094-2-17
AGTTCCGGCCCCAGAAGGCCAAAACTCT
25._GC-08-094-2-17
AGTTCCGGCCCCAGAAGGCCAAAACT_
26._GC-03-028-3-02
AGTTCCGGCCCCAGAAGGCCAAAACTCT
27._PA_169_[PER]
AGTT_____AAGG___CTCT
28._PA_169_[PER]
AGTT_____AAGG___CTCT
29._PA_169_[PER]
AGTT_____AAGG___CTCT
30._PA_169_[PER]
AGTT_____AAGG___CTCT
31._PA_169_[PER]
AGTT_____AAGG___CTCT
32._PA_169_[PER]
AGTT_____AAGG___CTCT
33._PA_169_[PER]
AGTT_____AAGG___CTCT
34._PA_169_[PER]
AGTT_____AAGG___CTCT
35._PA_169_[PER]
AGTT_____AAGG___CTCT
36._PA_169_[PER]
AGTT_____AAGG___CTCT
37._PA_169_[PER]
AGTT_____AAGG___CTCT
38._PA_169_[PER]
AGTT_____AAGG___CTCT
39._PA_169_[PER]
AGTT_____AAGG___CTCT
40._PA_169_[PER]
AGTT_____AAGG___CTCT
41._PA_169_[PER]
AGTT_____AAGG___CTCT
42._PA_169_[PER]
AGTT_____AAGG___CTCT
43._PA_169_[PER]
AGTT_____AAGG___CTCT
44._PA_169_[PER]
AGTT_____AAGG___CTCT
45._PA_169_[PER]
AGTT_____AAGG___CTCT
46._PA_169_[PER]
AGTT_____AAGG___CTCT
47._PA_169_[PER]
AGTT_____AAGG___CTCT
48._PA_169_[PER]
AGTT_____AAGG___CTCT
49._PA_169_[PER]
AGTT_____AAGG___CTCT
50._PA_169_[PER]
AGTT_____AAGG___CTCT
51._PA_169_[PER]
AGTT_____AAGG___CTCT
52._PA_169_[PER]
AGTT_____AAGG___CTCT
53._PA_169_[PER]
AGTT_____AAGG___CTCT
54._PA_169_[PER]
AGTT_____AAGG___CT_
55._GC-08-094-2-17
AGTTCCGGCCCCAGAAGGCCAAAACTCT
56._RUQ_1479
_______AAGG__AACT_
57._PA_169_[PER]
AATT_____AAGG___CTCT
58._RUQ_1479
AATT_____AAGG___CTCT
59._RUQ_1479
AA______AAGG__AA__
60._RUQ_1479
_AACCGGCCCC_AACCGGAAAAAGAG
61._MITC-000600
_AACCGGCCCC_AACCGGAAAAAGAG
 858687888990919293     
_Input profile
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
1._GC-08-094-2-17
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
2._GC-08-094-2-17
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
3._GC-08-094-2-17
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
4._GC-03-028-3-02
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
5._GC-03-028-3-02
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
6._GC-03-028-3-02
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
7._GC-03-028-3-02
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
8._GC-03-028-3-02
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
9._GC-03-028-3-02
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
10._GC-03-028-3-02
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
11._GC-03-028-3-02
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
12._GC-08-094-2-17
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
13._GC-08-094-2-17
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
14._GC-08-094-2-17
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
15._GC-08-094-2-17
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
16._GC-08-094-2-17
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
17._GC-08-094-2-17
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
18._GC-08-094-2-17
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
19._GC-08-094-2-17
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
20._GC-08-094-2-17
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
21._GC-03-028-3-02
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
22._GC-03-028-3-02
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
23._GC-08-094-2-17
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
24._GC-08-094-2-17
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
25._GC-08-094-2-17
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
26._GC-03-028-3-02
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
27._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
28._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
29._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
30._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
31._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
32._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
33._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
34._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
35._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
36._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
37._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
38._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
39._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
40._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
41._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
42._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
43._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
44._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
45._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
46._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
47._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
48._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
49._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
50._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
51._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
52._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
53._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
54._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
55._GC-08-094-2-17
CCCCAACTCCTTTTATGGX_XX_XX_XX_XX_X
56._RUQ_1479
__AACCCCTT___X_XX_XX_XX_XX_X
57._PA_169_[PER]
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
58._RUQ_1479
CC_AA_CCTTTT__X_XX_XX_XX_XX_X
59._RUQ_1479
CC__CT_TT___X_XX_XX_XX_XX_X
60._RUQ_1479
_GG__GGAAAAATGGX_XX_XX_XX_XX_X
61._MITC-000600
_GG__GGAAAAATGGX_XX_XX_XX_XX_X

Input profile: PA_169_[PER] GC-08-094-2-17

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP3
 Mars, 2018

1._PA_169_[PER] GC-08-094-2-17

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

2._PA_169_[PER] GC-08-094-2-17

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

3._PA_169_[PER] GC-08-094-2-17

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

4._PA_169_[PER] GC-03-028-3-02

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

5._PA_169_[PER] GC-03-028-3-02

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

6._PA_169_[PER] GC-03-028-3-02

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP3
 Mars, 2018

7._PA_169_[PER] GC-03-028-3-02

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP2
 Mars, 2018

8._PA_169_[PER] GC-03-028-3-02

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

9._PA_169_[PER] GC-03-028-3-02

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

10._PA_169_[PER] GC-03-028-3-02

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

11._PA_169_[PER] GC-03-028-3-02

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

12._PA_169_[PER] GC-08-094-2-17

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

13._PA_169_[PER] GC-08-094-2-17

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

14._PA_169_[PER] GC-08-094-2-17

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 18
Notes: 18
 Mars, 2018

15._PA_169_[PER] GC-08-094-2-17

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

16._PA_169_[PER] GC-08-094-2-17

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

17._PA_169_[PER] GC-08-094-2-17

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

18._PA_169_[PER] GC-08-094-2-17

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

19._PA_169_[PER] GC-08-094-2-17

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

20._PA_169_[PER] GC-08-094-2-17

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

21._PA_169_[PER] GC-03-028-3-02

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

22._PA_169_[PER] GC-03-028-3-02

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

23._PA_169_[PER] GC-08-094-2-17

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 17
Notes: 17
 Mars, 2018

24._PA_169_[PER] GC-08-094-2-17

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

25._PA_169_[PER] GC-08-094-2-17

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

26._PA_169_[PER] GC-03-028-3-02

identical
89 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

27._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 3
 Dapeng Zhang, 2016

28._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 11 > F
 Dapeng Zhang, 2016

29._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 10 > F
 Dapeng Zhang, 2016

30._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 1 > FP
 Dapeng Zhang, 2016

31._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 16
 Dapeng Zhang, 2016

32._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 15
 Dapeng Zhang, 2016

33._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 14
 Dapeng Zhang, 2016

34._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 13
 Dapeng Zhang, 2016

35._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 6
 Dapeng Zhang, 2016

36._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 3
 Dapeng Zhang, 2016

37._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

38._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 4
 Dapeng Zhang, 2016

39._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 2 > FP
 Dapeng Zhang, 2016

40._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 7 > FP
 Dapeng Zhang, 2016

41._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 1 > FP
 Dapeng Zhang, 2016

42._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 18
 Dapeng Zhang, 2016

43._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 17
 Dapeng Zhang, 2016

44._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 16
 Dapeng Zhang, 2016

45._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 15
 Dapeng Zhang, 2016

46._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 14
 Dapeng Zhang, 2016

47._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 13
 Dapeng Zhang, 2016

48._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 12
 Dapeng Zhang, 2016

49._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 11
 Dapeng Zhang, 2016

50._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 8
 Dapeng Zhang, 2016

51._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 6
 Dapeng Zhang, 2016

52._PA_169_[PER]

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 5
 Dapeng Zhang, 2016

53._PA_169_[PER]

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3302 8
 Dapeng Zhang, 2016

54._PA_169_[PER]

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8217 9
 Dapeng Zhang, 2016

55._PA_169_[PER] GC-08-094-2-17

99.5 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

56._PA_169_[PER] RUQ_1479

98.8 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

57._PA_169_[PER]

98.7 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 491
 Dapeng Zhang, 2016

58._PA_169_[PER] RUQ_1479

97.4 %
38 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

59._PA_169_[PER] RUQ_1479

92.5 %
20 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

60._PA_169_[PER] RUQ_1479

49.4 %
79 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

61._PA_169_[PER] MITC-000600

49.4 %
79 shared markers

USDA-SHRS, United States of America
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP731 69TcSNP701 70TcSNP1041
71TcSNP645 72TcSNP917 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240