SNP Profiles matching ICS 48

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AT	CT	CG	GG	GG	TT	GG	GT	AC	GT	CT	TT	AA	CC
1._ICS_40___	AT	CT	CG	GG	GG	TT	GT	GT	AC	GT	CT	TT	AA	CC
2._ICS_46___	AT	CT	CG	GG	GG	TT	GG	GT	AC	GT	CT	TT	AA	CC
3._ICS_46___	__	__	__	GG	AG	__	GG	__	__	__	CT	__	AG	CC
4._ICS_60___	AT	CT	CG	GG	GG	TT	GG	GG	CC	__	CT	TT	AA	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AT	CT	CC	AA	CG	GG	CG	TT	AA	AC	CT	CT	AG	TT
1._ICS_40___	AT	CT	CT	AA	CG	GG	CG	TT	AA	CC	CT	CT	AG	GT
2._ICS_46___	AT	CT	CC	AA	CG	AG	CG	TT	AA	AC	CT	CT	AA	GT
3._ICS_46___	__	__	CC	AA	CG	__	__	__	AA	AC	__	CT	__	__
4._ICS_60___	AT	CT	CT	AA	CG	AG	CG	TT	AA	AC	CC	CT	AG	GT

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	CG	AG	CG	AG	TT	CC	AC	AT	CG	AG	CC	CT	AC
1._ICS_40___	CT	CG	AG	CG	AG	TT	CC	AC	AT	CC	AG	CC	CT	AC
2._ICS_46___	CC	CG	GG	CG	AG	TT	CC	CC	AT	CG	AG	CC	CT	__
3._ICS_46___	CT	CG	AG	__	AG	TT	CC	__	AT	__	__	__	__	AC
4._ICS_60___	CT	CG	AG	CG	AG	TT	CT	AC	AA	CG	AA	CC	CT	AC

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CC	AC	AG	AC	TT	AG	GT	AA	CT	AC	AT	GT	GG	CC
1._ICS_40___	CC	AC	AG	AC	TT	AG	GT	AG	CT	AC	AT	GT	GG	CC
2._ICS_46___	CC	AC	AG	CC	TT	AG	GT	AG	CT	AC	AT	GT	GG	CC
3._ICS_46___	CC	AC	AG	__	TT	AG	__	AG	CT	__	AT	GT	GG	CC
4._ICS_60___	CC	AC	AG	AC	TT	AG	GT	AG	CT	AC	AT	GT	GG	CC

	57	58	59
_Input profile	CT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._ICS_40___	CT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._ICS_46___	CT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._ICS_46___	__	__	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._ICS_60___	CT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: ICS_48 RUQ_146

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

View Data

Ame
0.475 Cri
0.519

1._ICS_40 RUQ_1432

94.1 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

View Data

Ame
0.489 Cri
0.505

2._ICS_46 RUQ_938

94 %
58 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

View Data

Ame
0.469 Cri
0.525

3._ICS_46 RUQ_938B

93.8 %
32 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

4._ICS_60 RUQ_959

90.5 %
58 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

View Data

Ame
0.477 Cri
0.518

Key to SNP Markers

1	TcSNP1527	2	TcSNP1524	3	TcSNP1458	4	TcSNP1404	5	TcSNP1401
6	TcSNP1293	7	TcSNP1275	8	TcSNP1253	9	TcSNP1230	10	TcSNP1205
11	TcSNP1144	12	TcSNP1112	13	TcSNP1062	14	TcSNP1053	15	TcSNP1019
16	TcSNP1010	17	TcSNP999	18	TcSNP998	19	TcSNP945	20	TcSNP899
21	TcSNP872	22	TcSNP836	23	TcSNP835	24	TcSNP823	25	TcSNP800
26	TcSNP739	27	TcSNP731	28	TcSNP723	29	TcSNP702	30	TcSNP660
31	TcSNP645	32	TcSNP644	33	TcSNP642	34	TcSNP640	35	TcSNP602
36	TcSNP591	37	TcSNP589	38	TcSNP577	39	TcSNP546	40	TcSNP529
41	TcSNP522	42	TcSNP519	43	TcSNP421	44	TcSNP363	45	TcSNP329
46	TcSNP305	47	TcSNP290	48	TcSNP230	49	TcSNP194	50	TcSNP189
51	TcSNP176	52	TcSNP144	53	TcSNP143	54	TcSNP131	55	TcSNP52
56	TcSNP49	57	TcSNP33	58	TcSNP19	59	TcSNP13

SNP Profiles matching ICS 48

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Input profile: ICS_48 RUQ_146

1._ICS_40 RUQ_1432

94.1 % 59 shared markers

2._ICS_46 RUQ_938

94 % 58 shared markers

3._ICS_46 RUQ_938B

93.8 % 32 shared markers

4._ICS_60 RUQ_959

90.5 % 58 shared markers

94.1 %
59 shared markers

94 %
58 shared markers

93.8 %
32 shared markers

90.5 %
58 shared markers