SNP Profiles matching ICS 48

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AT	CT	CG	GG	GG	TT	GG	GG	CC	CT	TT	AA	CC	AT
1._ICS_46___	__	__	__	GG	AG	__	GG	__	__	CT	__	AG	CC	__
2._ICS_40___	AT	CT	CG	GG	GG	TT	GT	GT	AC	CT	TT	AA	CC	AT
3._ICS_48___	AT	CT	CG	GG	GG	TT	GG	GT	AC	CT	TT	AA	CC	AT

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CT	CT	AA	CG	AG	CG	TT	AA	AC	CC	CT	AG	GT	CT
1._ICS_46___	__	CC	AA	CG	__	__	__	AA	AC	__	CT	__	__	CT
2._ICS_40___	CT	CT	AA	CG	GG	CG	TT	AA	CC	CT	CT	AG	GT	CT
3._ICS_48___	CT	CC	AA	CG	GG	CG	TT	AA	AC	CT	CT	AG	TT	CC

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CG	AG	CG	AG	TT	CT	AC	AA	CG	AA	CC	CT	AC	CC
1._ICS_46___	CG	AG	__	AG	TT	CC	__	AT	__	__	__	__	AC	CC
2._ICS_40___	CG	AG	CG	AG	TT	CC	AC	AT	CC	AG	CC	CT	AC	CC
3._ICS_48___	CG	AG	CG	AG	TT	CC	AC	AT	CG	AG	CC	CT	AC	CC

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	AC	AG	AC	TT	AG	GT	AG	CT	AC	AT	GT	GG	CC	CT
1._ICS_46___	AC	AG	__	TT	AG	__	AG	CT	__	AT	GT	GG	CC	__
2._ICS_40___	AC	AG	AC	TT	AG	GT	AG	CT	AC	AT	GT	GG	CC	CT
3._ICS_48___	AC	AG	AC	TT	AG	GT	AA	CT	AC	AT	GT	GG	CC	CT

	57	58
_Input profile	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._ICS_46___	__	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._ICS_40___	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._ICS_48___	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: ICS_60 RUQ_959

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

Ame
0.477 Cri
0.518

1._ICS_46 RUQ_938B

92.2 %
32 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

2._ICS_40 RUQ_1432

91.4 %
58 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

Ame
0.489 Cri
0.505

3._ICS_48 RUQ_146

90.5 %
58 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

Ame
0.475 Cri
0.519

Key to SNP Markers

Key to SNP Markers

1	TcSNP1527	2	TcSNP1524	3	TcSNP1458	4	TcSNP1404	5	TcSNP1401
6	TcSNP1293	7	TcSNP1275	8	TcSNP1253	9	TcSNP1230	10	TcSNP1144
11	TcSNP1112	12	TcSNP1062	13	TcSNP1053	14	TcSNP1019	15	TcSNP1010
16	TcSNP999	17	TcSNP998	18	TcSNP945	19	TcSNP899	20	TcSNP872
21	TcSNP836	22	TcSNP835	23	TcSNP823	24	TcSNP800	25	TcSNP739
26	TcSNP731	27	TcSNP723	28	TcSNP702	29	TcSNP660	30	TcSNP645
31	TcSNP644	32	TcSNP642	33	TcSNP640	34	TcSNP602	35	TcSNP591
36	TcSNP589	37	TcSNP577	38	TcSNP546	39	TcSNP529	40	TcSNP522
41	TcSNP519	42	TcSNP421	43	TcSNP363	44	TcSNP329	45	TcSNP305
46	TcSNP290	47	TcSNP230	48	TcSNP194	49	TcSNP189	50	TcSNP176
51	TcSNP144	52	TcSNP143	53	TcSNP131	54	TcSNP52	55	TcSNP49
56	TcSNP33	57	TcSNP19	58	TcSNP13