SNP Profiles matching NA 710

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AATTCCGGAGAAGTTTAAGGCCCTAGCC
1._IMC_27___
AATTCGGGAGAAGTTTAAGTCCTTAGCC
2._IMC_27___
AATTCGGGAGAAGTTTAAGTCCTTAGCC
3._NA_710___
AATTCGGGAGAAGTTTAAGGCCCTGGCC
4._SPEC_41_/6-18___
AATT__GG______TTAA__CC__AACC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AATTCCAGCGGGGGTTATACTTTTGGGG
1._IMC_27___
AATTCCAGCGGGGGTTTTCCTTTTGGGG
2._IMC_27___
AATTCCAGCGGGGGTTTTCCTTTTGGGG
3._NA_710___
AATTCCAGGGGGGGTTATACTTTTGGGG
4._SPEC_41_/6-18___
AA____GG____GGTT____TTTTGGGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
TTCGAACCAACCCCAAAAGGAACCCTAC
1._IMC_27___
TTCCAACCAACCCCAAAAGGAACCCTAC
2._IMC_27___
TTCCAACCAACCCCAAAAGGAACCCTAC
3._NA_710___
TTCCAACCAACTCCAAATGGAACCCTAC
4._SPEC_41_/6-18___
TT__AACCAA__CCAAATCG__CCTT__
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
CCACGGAACCGGGGCCCCAATTGGCCTT
1._IMC_27___
CCACGGAACCGGGGCTCCATTTGGCCTT
2._IMC_27___
CCACGGAACCGGGGCTCCATTTGGCCTT
3._NA_710___
CCCCGGAACTGGGGCCCCATTTGGCCTT
4._SPEC_41_/6-18___
CC__GGAA____GGCCCC__TTGGCC__
 57 58             
_Input profile
ACCTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._IMC_27___
ACCTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._IMC_27___
ACCTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._NA_710___
ACCTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._SPEC_41_/6-18___
CCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: NA_232 RUQ_1504

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

1._IMC_27 RUQ_515B

93.1 %
58 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._IMC_27 RUQ_515

93.1 %
58 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

3._NA_710 RUQ_1588

92.2 %
58 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

4._SPEC_41_/6-18 RUQ_1325

90.5 %
37 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

 


  Key to SNP Markers

1TcSNP1527 2TcSNP1524 3TcSNP1458 4TcSNP1404 5TcSNP1401
6TcSNP1293 7TcSNP1275 8TcSNP1253 9TcSNP1230 10TcSNP1205
11TcSNP1144 12TcSNP1112 13TcSNP1062 14TcSNP1053 15TcSNP1019
16TcSNP1010 17TcSNP999 18TcSNP998 19TcSNP945 20TcSNP899
21TcSNP872 22TcSNP836 23TcSNP835 24TcSNP823 25TcSNP800
26TcSNP739 27TcSNP731 28TcSNP723 29TcSNP702 30TcSNP660
31TcSNP645 32TcSNP644 33TcSNP642 34TcSNP640 35TcSNP602
36TcSNP591 37TcSNP589 38TcSNP577 39TcSNP546 40TcSNP529
41TcSNP522 42TcSNP519 43TcSNP421 44TcSNP363 45TcSNP329
46TcSNP305 47TcSNP290 48TcSNP194 49TcSNP189 50TcSNP176
51TcSNP144 52TcSNP143 53TcSNP131 54TcSNP52 55TcSNP49
56TcSNP33 57TcSNP19 58TcSNP13