SNP Profiles matching SC 9

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	GG	GG	GG	TT	GG	TT	CC	AA	TT	TT	TT	AA
1._B_12_/2_[POU]___	TT	CC	GG	GG	GG	TT	GG	TT	__	AA	TT	TT	TT	AA
2._EET_48_[ECU]___	TT	CC	GG	GG	GG	TT	GG	TT	__	AA	TT	TT	TT	AA
3._N_38_[T38]___	TT	CC	GG	GG	GG	__	GG	TT	__	AA	TT	TT	TT	AA
4._EEG_8___	TT	CC	GG	GG	GG	TT	TT	TT	CT	AA	TT	TT	TT	AA
5._MATINA_1_/6___	TT	CC	GG	GG	GG	TT	GG	TT	CC	AA	TT	TT	TT	AA
6._BE_8___	AT	CT	GG	GG	GG	TT	TT	TT	TT	AA	GT	TT	TT	AA
7._APA_4___	AA	TT	GG	GG	GG	TT	GG	TT	CC	AA	TT	CC	TT	AA
8._APA_5___	AA	TT	GG	GG	GG	TT	GG	TT	CC	AA	TT	CC	TT	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CC	AA	CC	TT	GG	CC	AA	GG	TT	AA	AA	TT	TT	GG
1._B_12_/2_[POU]___	CC	AA	CC	TT	GG	CC	AA	GG	TT	AA	AA	TT	TT	GG
2._EET_48_[ECU]___	CC	AA	CC	TT	GG	CC	AA	GG	TT	AA	AA	TT	TT	GG
3._N_38_[T38]___	__	AA	CT	TT	GG	CC	AA	GG	TT	AA	AA	TT	TT	GG
4._EEG_8___	CC	AA	CT	CT	GG	CC	AA	GG	TT	AA	AA	TT	TT	GG
5._MATINA_1_/6___	CC	AA	TT	TT	GG	CC	AA	GG	TT	AA	AA	TT	TT	GG
6._BE_8___	CC	AA	CC	CT	GG	CC	AA	GG	TT	AA	AA	TT	TT	GG
7._APA_4___	CC	AA	CC	TT	GG	CC	AA	GG	TT	TT	AA	TT	TT	GG
8._APA_5___	CC	AA	CC	TT	GG	CC	AA	GG	TT	TT	AA	TT	TT	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	GG	TT	GG	AA	CC	AA	TT	TT	AA	TT	CC	GG	AC	TT
1._B_12_/2_[POU]___	GG	TT	GG	AA	CC	AA	TT	TT	AA	TT	CC	GG	CC	TT
2._EET_48_[ECU]___	GG	TT	GG	AA	CC	AA	TT	TT	AA	TT	CC	GG	CC	TT
3._N_38_[T38]___	GG	TT	CG	AA	CC	AA	TT	TT	AC	TT	CC	AG	__	TT
4._EEG_8___	GT	TT	GG	AA	CC	AA	TT	TT	AA	TT	CG	GG	AC	TT
5._MATINA_1_/6___	GG	TT	GG	AA	CC	AA	TT	CC	AA	TT	CC	GG	AC	TT
6._BE_8___	GG	TT	GG	AA	CC	AA	TT	TT	AA	TT	CC	GG	AC	TT
7._APA_4___	GG	TT	GG	AA	CC	AA	TT	CC	AA	TT	CC	GG	AC	TT
8._APA_5___	GG	TT	GG	AA	CC	AA	TT	CC	AA	TT	CC	GG	AC	TT

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CC	CC	AA	GG	AA	TT	AA	TT	GG	CC	CC	TT	GG	GG
1._B_12_/2_[POU]___	CC	CC	AA	GG	AA	TT	AA	TT	GG	CC	CC	TT	GG	GG
2._EET_48_[ECU]___	CC	CC	AA	GG	AA	TT	AA	TT	GG	CC	CC	TT	GG	GG
3._N_38_[T38]___	CC	CT	AA	GG	AA	TT	AA	TT	GG	CC	AC	TT	GG	TT
4._EEG_8___	CC	CC	AA	GG	AA	TT	AA	GT	GG	CC	CC	TT	TT	GG
5._MATINA_1_/6___	CC	CC	AA	GG	AA	TT	AA	GG	GG	CC	CC	TT	TT	TT
6._BE_8___	CC	CC	AA	GG	AA	TT	AG	TT	GG	CC	CC	TT	TT	GG
7._APA_4___	CC	CC	AA	GG	AA	TT	AA	TT	GG	CC	CC	TT	TT	GG
8._APA_5___	CC	CC	AA	GG	AA	TT	AA	TT	GG	CC	CC	TT	TT	GG

	57	58	59	60
_Input profile	CC	CC	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._B_12_/2_[POU]___	CC	CC	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._EET_48_[ECU]___	CC	CC	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._N_38_[T38]___	CC	CC	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._EEG_8___	CC	CC	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._MATINA_1_/6___	CC	CC	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._BE_8___	CC	CC	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._APA_4___	CC	CC	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._APA_5___	CC	CC	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: SC_9_[UNK] RUQ_44

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

1._B_12_/2_[POU] RUQ_436

99.2 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

2._EET_48_[ECU] RUQ_1693

99.2 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

3._N_38_[T38] RUQ_1159

92.9 %
56 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

4._EEG_8 RUQ_1726

91.7 %
60 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

5._MATINA_1_/6 RUQ_1715

91.7 %
60 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

6._BE_8 RUQ_1694

90.8 %
60 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

Ame
0.880 Par
0.102

7._APA_4 RUQ_843

90 %
60 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

Ame
0.631 Nan
0.142 Par
0.196

8._APA_5 RUQ_1695

90 %
60 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

Ame
0.631 Nan
0.142 Par
0.196

Key to SNP Markers

Key to SNP Markers

1	TcSNP1527	2	TcSNP1524	3	TcSNP1458	4	TcSNP1404	5	TcSNP1401
6	TcSNP1293	7	TcSNP1275	8	TcSNP1253	9	TcSNP1237	10	TcSNP1230
11	TcSNP1205	12	TcSNP1144	13	TcSNP1112	14	TcSNP1062	15	TcSNP1053
16	TcSNP1019	17	TcSNP1010	18	TcSNP999	19	TcSNP998	20	TcSNP945
21	TcSNP899	22	TcSNP872	23	TcSNP836	24	TcSNP835	25	TcSNP823
26	TcSNP800	27	TcSNP739	28	TcSNP731	29	TcSNP723	30	TcSNP702
31	TcSNP660	32	TcSNP645	33	TcSNP644	34	TcSNP642	35	TcSNP640
36	TcSNP602	37	TcSNP591	38	TcSNP589	39	TcSNP577	40	TcSNP546
41	TcSNP529	42	TcSNP522	43	TcSNP519	44	TcSNP421	45	TcSNP363
46	TcSNP329	47	TcSNP305	48	TcSNP290	49	TcSNP230	50	TcSNP194
51	TcSNP189	52	TcSNP176	53	TcSNP144	54	TcSNP143	55	TcSNP131
56	TcSNP52	57	TcSNP49	58	TcSNP33	59	TcSNP19	60	TcSNP13